RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 OR4C6Q8NH72 309 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 OR13C6PQ8NH95 151 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 GRPEL2Q8TAA5 225 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 GNPDA2Q8TDQ7 276 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 SKA2Q8WVK7 121 aaPredicted RBP1.04□□□□□ -2.24
TARDBP-208ENST00000477447 DNAJC9Q8WXX5 260 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 ACOT12Q8WYK0 555 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 BORCS7Q96B45 105 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 OR7D2Q96RA2 312 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 OR52E6Q96RD3 313 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 GNB1LQ9BYB4 327 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 KRTAP4-1Q9BYQ7 146 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 NKX6-2Q9C056 277 aaPredicted RBP1.04□□□□□ -2.24
TARDBP-208ENST00000477447 MAP1LC3BQ9GZQ8 125 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 CCDC90BQ9GZT6 254 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 EIF5A2Q9GZV4 153 aaKnown RBP1.04□□□□□ -2.24
TARDBP-208ENST00000477447 RNASE7Q9H1E1 156 aaKnown RBP1.04□□□□□ -2.24
TARDBP-208ENST00000477447 SH3BGRL3Q9H299 93 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 FAM96AQ9H5X1 160 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 SPANXA1Q9NS26 97 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 LYRM2Q9NU23 88 aaPredicted RBP1.04□□□□□ -2.24
TARDBP-208ENST00000477447 C14orf105Q9NVL8 296 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 PRO2289Q9P1D8 64 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 PKIGQ9Y2B9 76 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 ROBO3Q96MS0 1386 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 KIF15Q9NS87 1388 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 DSCAML1Q8TD84 2053 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 OVOS2A0A0J9YW53 1432 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 OVOS2Q6IE36 1432 aa1.04□□□□□ -2.24
TARDBP-208ENST00000477447 MYO5BQ9ULV0 1848 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 PRRC2BQ5JSZ5 2229 aaKnown RBP1.03□□□□□ -2.24
TARDBP-208ENST00000477447 A0A087WUU8 490 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 MEIKINA0A087WXM9 373 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 TRAV26-2A0A0B4J265 109 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 TEX50A0A1B0GTY4 177 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 A0A1B0GX51 115 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 hADV38S2A0JD32 116 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 IGKV2-29A2NJV5 120 aaPredicted RBP1.03□□□□□ -2.24
TARDBP-208ENST00000477447 TRAPPC13A5PLN9 417 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 CCDC160A6NGH7 325 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 FAM25AB3EWG3 89 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 FAM25CB3EWG5 89 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 FAM25GB3EWG6 89 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 INMT-MINDY4F8WBC2 141 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 MRASO14807 208 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 DEGS1O15121 323 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 HMGB3O15347 200 aaKnown RBP1.03□□□□□ -2.24
TARDBP-208ENST00000477447 PFDN1O60925 122 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 GADD45GO95257 159 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 IFNA10P01566 189 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 IGHV1-69P01742 117 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 FGF6P10767 208 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 SPI1P17947 270 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 RPL7P18124 248 aaKnown RBP1.03□□□□□ -2.24
TARDBP-208ENST00000477447 CCL1P22362 96 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 RPS3P23396 243 aaKnown RBP eCLIP1.03□□□□□ -2.24
TARDBP-208ENST00000477447 KDELR1P24390 212 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 SRIP30626 198 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 GLRXP35754 106 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 CA7P43166 264 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 EVX1P49640 407 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 H2BFSP57053 126 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 GNG2P59768 71 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 TPI1P60174 286 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 RRAS2P62070 204 aaPredicted RBP1.03□□□□□ -2.24
TARDBP-208ENST00000477447 RPS24P62847 133 aaKnown RBP1.03□□□□□ -2.24
TARDBP-208ENST00000477447 RPS28P62857 69 aaKnown RBP1.03□□□□□ -2.24
TARDBP-208ENST00000477447 GNG5P63218 68 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 HPCAP84074 193 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 TNFAIP6P98066 277 aaPredicted RBP1.03□□□□□ -2.24
TARDBP-208ENST00000477447 OR8B8Q15620 311 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 LCN8Q6JVE9 175 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 DCUN1D2Q6PH85 259 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 HAGHLQ6PII5 290 aaPredicted RBP1.03□□□□□ -2.24
TARDBP-208ENST00000477447 GOLT1AQ6ZVE7 132 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 EXOC3-AS1Q8N2X6 119 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 C12orf45Q8N5I9 185 aaPredicted RBP1.03□□□□□ -2.24
TARDBP-208ENST00000477447 DEFB119Q8N690 84 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 MCFD2Q8NI22 146 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 ZNF563Q8TA94 476 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 JOSD2Q8TAC2 188 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 THEM6Q8WUY1 208 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 CYGBQ8WWM9 190 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 DCUN1D1Q96GG9 259 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 CCDC115Q96NT0 180 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 VPS25Q9BRG1 176 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 MIEN1Q9BRT3 115 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 TCEAL7Q9BRU2 100 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 DOHHQ9BU89 302 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 EFCAB11Q9BUY7 163 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 CCDC32Q9BV29 185 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 TIMM21Q9BVV7 248 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 TMEM222Q9H0R3 208 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 HDGFL3Q9Y3E1 203 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 BCL9O00512 1426 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 RGS12O14924 1447 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 FGD6Q6ZV73 1430 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 SMG6Q86US8 1419 aaKnown RBP1.03□□□□□ -2.24
TARDBP-208ENST00000477447 ERBINQ96RT1 1412 aa1.03□□□□□ -2.24
TARDBP-208ENST00000477447 TRAV36DV7A0A075B6V5 113 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 219.9 ms