RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 CROCCP3Q8IVE0 287 aa7.93□□□□□ -1.14
CDRT1-205ENST00000475944 OR4A16Q8NH70 328 aa7.93□□□□□ -1.14
CDRT1-205ENST00000475944 PINX1Q96BK5 328 aaKnown RBP7.93□□□□□ -1.14
CDRT1-205ENST00000475944 TRAV2A0A0B4J234 112 aa7.92□□□□□ -1.14
CDRT1-205ENST00000475944 C11orf94C9JXX5 98 aa7.92□□□□□ -1.14
CDRT1-205ENST00000475944 HRH1P35367 487 aa7.92□□□□□ -1.14
CDRT1-205ENST00000475944 NPBWR1P48145 328 aa7.92□□□□□ -1.14
CDRT1-205ENST00000475944 TAS2R20P59543 309 aa7.92□□□□□ -1.14
CDRT1-205ENST00000475944 DEFB131AP59861 70 aa7.92□□□□□ -1.14
CDRT1-205ENST00000475944 ERHP84090 104 aaKnown RBP7.92□□□□□ -1.14
CDRT1-205ENST00000475944 PRCDQ00LT1 54 aa7.92□□□□□ -1.14
CDRT1-205ENST00000475944 PHLDA2Q53GA4 152 aa7.92□□□□□ -1.14
CDRT1-205ENST00000475944 STHQ8IWL8 128 aa7.92□□□□□ -1.14
CDRT1-205ENST00000475944 SEC22AQ96IW7 307 aa7.92□□□□□ -1.14
CDRT1-205ENST00000475944 TMEM231Q9H6L2 316 aa7.92□□□□□ -1.14
CDRT1-205ENST00000475944 VSIRQ9H7M9 311 aa7.92□□□□□ -1.14
CDRT1-205ENST00000475944 DEFB4AO15263 64 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 IGHV3-48P01763 117 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 PRSS3P35030 304 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 HSPE1P61604 102 aaKnown RBP7.91□□□□□ -1.14
CDRT1-205ENST00000475944 TSPAN5P62079 268 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 RPL11P62913 178 aaKnown RBP7.91□□□□□ -1.14
CDRT1-205ENST00000475944 PRR20EP86478 221 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 PRR20CP86479 221 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 PRR20DP86480 221 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 PRR20BP86481 221 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 PRR20AP86496 221 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 TMEM41BQ5BJD5 291 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 LEMD1Q68G75 181 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 TOMM20LQ6UXN7 152 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 ZNF600Q6ZNG1 722 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 TBC1D26Q86UD7 250 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 SAMD12Q8N8I0 201 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 DUSP18Q8NEJ0 188 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 ST8SIA2Q92186 375 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 MS4A6AQ9H2W1 248 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 HRH4Q9H3N8 390 aa7.91□□□□□ -1.14
CDRT1-205ENST00000475944 IGLL5B9A064 214 aa7.9□□□□□ -1.14
CDRT1-205ENST00000475944 HLA-DMAP28067 261 aa7.9□□□□□ -1.14
CDRT1-205ENST00000475944 SNCAP37840 140 aa7.9□□□□□ -1.14
CDRT1-205ENST00000475944 NEDD8Q15843 81 aa7.9□□□□□ -1.14
CDRT1-205ENST00000475944 CENPSQ8N2Z9 138 aa7.9□□□□□ -1.14
CDRT1-205ENST00000475944 Q8NAQ8 132 aa7.9□□□□□ -1.14
CDRT1-205ENST00000475944 MRGPRFQ96AM1 343 aa7.9□□□□□ -1.14
CDRT1-205ENST00000475944 RABAC1Q9UI14 185 aa7.9□□□□□ -1.14
CDRT1-205ENST00000475944 PUS1Q9Y606 427 aaKnown RBP eCLIP7.9□□□□□ -1.14
CDRT1-205ENST00000475944 IGHV3-66A0A0C4DH42 116 aa7.89□□□□□ -1.15
CDRT1-205ENST00000475944 A0A1W2PS18 150 aa7.89□□□□□ -1.15
CDRT1-205ENST00000475944 CORTO00230 105 aa7.89□□□□□ -1.15
CDRT1-205ENST00000475944 IGKV1-39P01597 117 aa7.89□□□□□ -1.15
CDRT1-205ENST00000475944 APOHP02749 345 aaPredicted RBP7.89□□□□□ -1.15
CDRT1-205ENST00000475944 IGKV1D-39P04432 117 aa7.89□□□□□ -1.15
CDRT1-205ENST00000475944 NPPCP23582 126 aa7.89□□□□□ -1.15
CDRT1-205ENST00000475944 UCP3P55916 312 aa7.89□□□□□ -1.15
CDRT1-205ENST00000475944 MORN3Q6PF18 240 aaPredicted RBP7.89□□□□□ -1.15
CDRT1-205ENST00000475944 LYSMD2Q8IV50 215 aa7.89□□□□□ -1.15
CDRT1-205ENST00000475944 ZFAND3Q9H8U3 227 aa7.89□□□□□ -1.15
CDRT1-205ENST00000475944 APLNQ9ULZ1 77 aa7.89□□□□□ -1.15
CDRT1-205ENST00000475944 IGHV4-28A0A0C4DH34 117 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 INS-IGF2F8WCM5 200 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 SCGB2A1O75556 95 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 TMEM50AO95807 157 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 SPP1P10451 314 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 MIFP14174 115 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 SUB1P53999 127 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDRT1-205ENST00000475944 SPINK9Q5DT21 86 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 LILRB2Q8N423 598 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 FAM24BQ8N5W8 94 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 SLC35G3Q8N808 338 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 GPX8Q8TED1 209 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 GRAMD2BQ96HH9 432 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 NARS2Q96I59 477 aaKnown RBP7.88□□□□□ -1.15
CDRT1-205ENST00000475944 METTL26Q96S19 204 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 PDCD10Q9BUL8 212 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 SCPEP1Q9HB40 452 aa7.88□□□□□ -1.15
CDRT1-205ENST00000475944 TRAV10A0A0B4J240 114 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 A0A1B0GU03 582 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 SMIM31A0A1B0GVY4 71 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 ZNF705EA8MWA4 302 aaPredicted RBP7.87□□□□□ -1.15
CDRT1-205ENST00000475944 K7EQG2 157 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 ATG12O94817 140 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 ATP6V1G2O95670 118 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 IFNA17P01571 189 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 RBMY1A1P0DJD3 496 aaKnown RBP7.87□□□□□ -1.15
CDRT1-205ENST00000475944 RBMY1CP0DJD4 496 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 HLA-DMBP28068 263 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 RCVRNP35243 200 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 TGFBR1P36897 503 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 RPS19P39019 145 aaKnown RBP7.87□□□□□ -1.15
CDRT1-205ENST00000475944 AKR1C2P52895 323 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 RBMY1FQ15415 496 aaKnown RBP7.87□□□□□ -1.15
CDRT1-205ENST00000475944 KCTD21Q4G0X4 260 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 TRPT1Q86TN4 253 aaKnown RBP7.87□□□□□ -1.15
CDRT1-205ENST00000475944 STXBP6Q8NFX7 210 aa7.87□□□□□ -1.15
CDRT1-205ENST00000475944 IGHV4-4A0A075B6R2 117 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 GIG44P09565 113 aaPredicted RBP7.86□□□□□ -1.15
CDRT1-205ENST00000475944 ZNF688P0C7X2 276 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 PGAM2P15259 253 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 CRYBB3P26998 211 aa7.86□□□□□ -1.15
CDRT1-205ENST00000475944 OPRK1P41145 380 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms