RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ATG2BQ96BY7 2078 aa2.77□□□□□ -1.97
SMC5-203ENST00000475540 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
SMC5-203ENST00000475540 IGKV1D-43A0A0B4J1Z2 117 aa2.76□□□□□ -1.97
SMC5-203ENST00000475540 FABP5P3A8MUU1 101 aa2.76□□□□□ -1.97
SMC5-203ENST00000475540 CLDN25C9JDP6 229 aa2.76□□□□□ -1.97
SMC5-203ENST00000475540 E7EQ34 232 aa2.76□□□□□ -1.97
SMC5-203ENST00000475540 UCHL1P09936 223 aa2.76□□□□□ -1.97
SMC5-203ENST00000475540 GLRXP35754 106 aa2.76□□□□□ -1.97
SMC5-203ENST00000475540 TOMM20LQ6UXN7 152 aa2.76□□□□□ -1.97
SMC5-203ENST00000475540 OR13D1Q8NGV5 346 aa2.76□□□□□ -1.97
SMC5-203ENST00000475540 AIF1LQ9BQI0 150 aa2.76□□□□□ -1.97
SMC5-203ENST00000475540 TRPM3Q9HCF6 1732 aaPredicted RBP2.76□□□□□ -1.97
SMC5-203ENST00000475540 ZCCHC11Q5TAX3 1644 aaKnown RBP2.75□□□□□ -1.97
SMC5-203ENST00000475540 SIPA1L1O43166 1804 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 KIF13BQ9NQT8 1826 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 A0A0J9YW62 118 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 A0A1W2PNN7 141 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 A0A1W2PQD3 144 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 RIIAD1A6NNX1 92 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 BANF1O75531 89 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 TFPTP0C1Z6 253 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 S100A4P26447 101 aaKnown RBP2.75□□□□□ -1.97
SMC5-203ENST00000475540 HLA-DMBP28068 263 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 ZNF705AQ6ZN79 300 aaPredicted RBP2.75□□□□□ -1.97
SMC5-203ENST00000475540 LCA10Q71F78 164 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 OR10D4PQ8NGN7 298 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 PLEKHB2Q96CS7 222 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 SPANXA1Q9NS26 97 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 SLC39A9Q9NUM3 307 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 TAS2R7Q9NYW3 318 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 GINS2Q9Y248 185 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 AMMECR1Q9Y4X0 333 aaPredicted RBP2.75□□□□□ -1.97
SMC5-203ENST00000475540 R4GN34 69 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 SDK2Q58EX2 2172 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 UHRF1BP1Q6BDS2 1440 aa2.75□□□□□ -1.97
SMC5-203ENST00000475540 TRAV41A0A0B4J266 112 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 PRORSD1PA6NEY8 169 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 PIAS1O75925 651 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 IGLV6-57P01721 117 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 IGHV3-7P01780 117 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 SCGB1A1P11684 91 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 GZMHP20718 246 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 TMEM128Q5BJH2 165 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 SAMD13Q5VXD3 122 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 ZNF767PQ75MW2 155 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 TMEM35BQ8NCS4 154 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 GRPEL2Q8TAA5 225 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 FGF13Q92913 245 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 DNAJC30Q96LL9 226 aa2.74□□□□□ -1.97
SMC5-203ENST00000475540 SCN10AQ9Y5Y9 1956 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 TRAPPC2LH3BP13 241 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 BUB1B-PAK6H3BSN5 160 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 ZNF73O43830 326 aaPredicted RBP2.73□□□□□ -1.97
SMC5-203ENST00000475540 CREBL2O60519 120 aaPredicted RBP2.73□□□□□ -1.97
SMC5-203ENST00000475540 MSMBP08118 114 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 CCL5P13501 91 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 LGALS3P17931 250 aaKnown RBP2.73□□□□□ -1.97
SMC5-203ENST00000475540 PSMB8P28062 276 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 ALDH3A1P30838 453 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 PSMD8P48556 350 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 ZNF80P51504 273 aaPredicted RBP2.73□□□□□ -1.97
SMC5-203ENST00000475540 CDC42P60953 191 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 YPEL3P61236 119 aaPredicted RBP2.73□□□□□ -1.97
SMC5-203ENST00000475540 KRTAP6-3Q3LI67 103 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 KTN1-AS1Q86SY8 53 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 TRAPPC6BQ86SZ2 158 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 CLVS1Q8IUQ0 354 aaPredicted RBP2.73□□□□□ -1.97
SMC5-203ENST00000475540 C10orf126Q8N4M7 172 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 NUP35Q8NFH5 326 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 OR8D2Q9GZM6 311 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 TUBA4BQ9H853 241 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 SETD5Q9C0A6 1442 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 DOCK6Q96HP0 2047 aa2.73□□□□□ -1.97
SMC5-203ENST00000475540 MDFIC2A0A1B0GVS7 189 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 DUXBA0A1W2PPF3 345 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 A0A1W2PRE2 83 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 C19orf84I3L1E1 186 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 CYB5BO43169 146 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 CSN2P05814 226 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 ZNF728P0DKX0 622 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 EMP1P54849 157 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 TPI1P60174 286 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 SURF2Q15527 256 aaPredicted RBP2.72□□□□□ -1.97
SMC5-203ENST00000475540 EXOC3-AS1Q8N2X6 119 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 CMTM2Q8TAZ6 248 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 IMMP2LQ96T52 175 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 TM2D3Q9BRN9 247 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 CCDC32Q9BV29 185 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 MRPL16Q9NX20 251 aaKnown RBP2.72□□□□□ -1.97
SMC5-203ENST00000475540 LAMTOR3Q9UHA4 124 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 ERGIC3Q9Y282 383 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 RBM7Q9Y580 266 aaKnown RBP2.72□□□□□ -1.97
SMC5-203ENST00000475540 FAM215AQ9Y5M1 114 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 KIF24Q5T7B8 1368 aa2.72□□□□□ -1.97
SMC5-203ENST00000475540 TRGV5A0A0B4J1U4 118 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 GNRH2O43555 120 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 HRES1P13985 223 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 DEFB134Q4QY38 66 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 LHFPL1Q86WI0 220 aa2.71□□□□□ -1.98
SMC5-203ENST00000475540 MSRB3Q8IXL7 192 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms