RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 TIMM9Q9Y5J7 89 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 ITPR3Q14573 2671 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 OTOGQ6ZRI0 2925 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 MXRA5Q9NR99 2828 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 IGHV3OR16-10A0A075B7F0 116 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 IGHV7-81A0A0B4J1V7 117 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 NPIPB5A8MRT5 1133 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 CD5LO43866 347 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 SOX15O60248 233 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 MPDU1O75352 247 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 TSPAN9O75954 239 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 ACTL6BO94805 426 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 BRI3O95415 125 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 IFNA10P01566 189 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 ATP6V0CP27449 155 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 RAB5CP51148 216 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 SERF2P84101 59 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 NDPQ00604 133 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 HES1Q14469 280 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 HNF4GQ14541 408 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 CLINT1Q14677 625 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 TNXAQ16473 311 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 NDUFA5Q16718 116 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 C19orf54Q5BKX5 351 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 ASPHD1Q5U4P2 390 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 ALKAL2Q6UX46 152 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 TTC9CQ8N5M4 171 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 C5orf56Q8N8D9 126 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 OR1L6Q8NGR2 347 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 OR2G3Q8NGZ4 309 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 LYPD6BQ8NI32 183 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 TAF15Q92804 592 aaKnown RBP eCLIP5.23□□□□□ -1.57
ATG4A-207ENST00000474825 SAT2Q96F10 170 aaPredicted RBP5.23□□□□□ -1.57
ATG4A-207ENST00000474825 TMEM68Q96MH6 324 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 SSX3Q99909 188 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 PSMG3Q9BT73 122 aaPredicted RBP5.23□□□□□ -1.57
ATG4A-207ENST00000474825 NPVFQ9HCQ7 196 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 UQCC1Q9NVA1 299 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 TMEM160Q9NX00 188 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 PITPNC1Q9UKF7 332 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 PAIP2BQ9ULR5 123 aaKnown RBP5.23□□□□□ -1.57
ATG4A-207ENST00000474825 DMRT1Q9Y5R6 373 aa5.23□□□□□ -1.57
ATG4A-207ENST00000474825 F11RQ9Y624 299 aaKnown RBP5.23□□□□□ -1.57
ATG4A-207ENST00000474825 SOX21Q9Y651 276 aaPredicted RBP5.23□□□□□ -1.57
ATG4A-207ENST00000474825 HIVEP1P15822 2718 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 UMAD1C9J7I0 102 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 TRIM77I1YAP6 450 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 M0QZK8 103 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 CORTO00230 105 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 FBXO24O75426 580 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 IFNA5P01569 189 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 OPN1MWP04001 364 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 OPN1MW2P0DN77 364 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 OPN1MW3P0DN78 364 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 OR13C7P0DN81 318 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 AREGP15514 252 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 SNCAP37840 140 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 IER3P46695 156 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 SUB1P53999 127 aaKnown RBP eCLIP5.22□□□□□ -1.57
ATG4A-207ENST00000474825 MFAP2P55001 183 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 CD69Q07108 199 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 FXYD3Q14802 87 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 DEFB112Q30KQ8 113 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 KRTAP21-3Q3LHN1 58 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 OR8G2PQ6IF36 304 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 Q6YL49 198 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 TMEM144Q7Z5S9 345 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 SGMS2Q8NHU3 365 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 RNF141Q8WVD5 230 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 TMED6Q8WW62 240 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 ARPC1AQ92747 370 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 MOB4Q9Y3A3 225 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 FAM96BQ9Y3D0 163 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 TET2Q6N021 2002 aaPredicted RBP5.22□□□□□ -1.57
ATG4A-207ENST00000474825 ABCA1O95477 2261 aa5.22□□□□□ -1.57
ATG4A-207ENST00000474825 NAV3Q8IVL0 2385 aa5.21□□□□□ -1.57
ATG4A-207ENST00000474825 IGLV11-55A0A075B6I3 123 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 NCBP2LA6PVI3 153 aaKnown RBP5.21□□□□□ -1.58
ATG4A-207ENST00000474825 I3L2K1 104 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 IGHG2P01859 326 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 IFNA4P05014 189 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 IGF1P05019 195 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 RAB14P61106 215 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 GAMTQ14353 236 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 PLGLAQ15195 96 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 AKIRIN2Q53H80 203 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 DPPA3Q6W0C5 159 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 BCL6BQ8N143 479 aaPredicted RBP5.21□□□□□ -1.58
ATG4A-207ENST00000474825 LILRB2Q8N423 598 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 EIF4E3Q8N5X7 224 aaKnown RBP5.21□□□□□ -1.58
ATG4A-207ENST00000474825 TMEM86BQ8N661 226 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 THAP8Q8NA92 274 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 TMEM116Q8NCL8 245 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 OR5R1Q8NH85 324 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 ZNF48Q96MX3 618 aaPredicted RBP5.21□□□□□ -1.58
ATG4A-207ENST00000474825 FANCD2OSQ96PS1 177 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 RASL11BQ9BPW5 248 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 HSPB9Q9BQS6 159 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 SLC25A33Q9BSK2 321 aa5.21□□□□□ -1.58
ATG4A-207ENST00000474825 HINT2Q9BX68 163 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms