RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 ELK4P28324 431 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 NUDT2P50583 147 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 CDK9P50750 372 aaKnown RBP3.19□□□□□ -1.9
SEC22A-204ENST00000473494 TMEM241Q24JQ0 296 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 ELP2Q6IA86 826 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 OLIG3Q7RTU3 272 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 TMEM144Q7Z5S9 345 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 ZIC4Q8N9L1 334 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 OR4X1Q8NH49 305 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 LMX1AQ8TE12 382 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 DYDC1Q8WWB3 177 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 PATE1Q8WXA2 126 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 BTF3L4Q96K17 158 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 EBPLQ9BY08 206 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 UBQLN4Q9NRR5 601 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 ARMC1Q9NVT9 282 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 C14orf166Q9Y224 244 aaKnown RBP3.19□□□□□ -1.9
SEC22A-204ENST00000473494 HEY1Q9Y5J3 304 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 URB1O60287 2271 aaKnown RBP3.19□□□□□ -1.9
SEC22A-204ENST00000473494 MGAQ8IWI9 3026 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 CHD6Q8TD26 2715 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 ZNF407Q9C0G0 2248 aa3.19□□□□□ -1.9
SEC22A-204ENST00000473494 ACACAQ13085 2346 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 IGLL5B9A064 214 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 D6RAR5 112 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 CCL22O00626 93 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 IFNA21P01568 189 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 IGHG2P01859 326 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 NBEAP1P0C6P0 100 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 IMPA1P29218 277 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 ALDH3A1P30838 453 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 OR1E2P47887 323 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 GZMMP51124 257 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 HIST1H3AP68431 136 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 HPCAP84074 193 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 H3F3AP84243 136 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 PSG4Q00888 419 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 CAV1Q03135 178 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 ACOT6Q3I5F7 207 aaPredicted RBP3.18□□□□□ -1.9
SEC22A-204ENST00000473494 UBE2NLQ5JXB2 153 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 HES3Q5TGS1 186 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 C3orf33Q6P1S2 294 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 SCGB1D4Q6XE38 83 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 HIST2H3AQ71DI3 136 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 LINC00304Q8N9R0 145 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 OR4C6Q8NH72 309 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 TNFAIP8L1Q8WVP5 186 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 RASSF5Q8WWW0 418 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 FXYD5Q96DB9 178 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 TRIB3Q96RU7 358 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 LINC01587Q99440 93 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 NMNAT1Q9HAN9 279 aaPredicted RBP3.18□□□□□ -1.9
SEC22A-204ENST00000473494 ZNF492Q9P255 531 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 GLS2Q9UI32 602 aa3.18□□□□□ -1.9
SEC22A-204ENST00000473494 CARHSP1Q9Y2V2 147 aaKnown RBP3.18□□□□□ -1.9
SEC22A-204ENST00000473494 ANKRD11Q6UB99 2663 aaPredicted RBP3.18□□□□□ -1.9
SEC22A-204ENST00000473494 ZNF106Q9H2Y7 1883 aaKnown RBP3.18□□□□□ -1.9
SEC22A-204ENST00000473494 IGHV2-26A0A0B4J1V2 119 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 IGHV3-43A0A0B4J1X8 118 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 FAM159BA6NKW6 160 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 OR5G3P0C626 314 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 ESDP10768 282 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 GTF2F2P13984 249 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 HSPA9P38646 679 aaKnown RBP3.17□□□□□ -1.9
SEC22A-204ENST00000473494 RPL5P46777 297 aaKnown RBP3.17□□□□□ -1.9
SEC22A-204ENST00000473494 GABRA4P48169 554 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 DAD1P61803 113 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 AP1S1P61966 158 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 ENDOGQ14249 297 aaKnown RBP3.17□□□□□ -1.9
SEC22A-204ENST00000473494 CENPWQ5EE01 88 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
SEC22A-204ENST00000473494 VN1R4Q7Z5H5 301 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 CALHM3Q86XJ0 350 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 IFT20Q8IY31 132 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 ZNF567Q8N184 647 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 OR2K2Q8NGT1 345 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 OR8S1Q8NH09 359 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 MAGOHBQ96A72 148 aaKnown RBP3.17□□□□□ -1.9
SEC22A-204ENST00000473494 CMSS1Q9BQ75 279 aaKnown RBP3.17□□□□□ -1.9
SEC22A-204ENST00000473494 TRIM4Q9C037 500 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 DOK5Q9P104 306 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 SLC23A2Q9UGH3 650 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 NDUFAF1Q9Y375 327 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 ZNF706Q9Y5V0 76 aaPredicted RBP3.17□□□□□ -1.9
SEC22A-204ENST00000473494 PTPRQQ9UMZ3 2332 aa3.17□□□□□ -1.9
SEC22A-204ENST00000473494 SMG1Q96Q15 3661 aaKnown RBP3.16□□□□□ -1.9
SEC22A-204ENST00000473494 SNRNP200O75643 2136 aaKnown RBP3.16□□□□□ -1.9
SEC22A-204ENST00000473494 SPTBP11277 2137 aa3.16□□□□□ -1.9
SEC22A-204ENST00000473494 IGSF10Q6WRI0 2623 aa3.16□□□□□ -1.9
SEC22A-204ENST00000473494 LOC285095A0A1B0GVY8 99 aa3.16□□□□□ -1.9
SEC22A-204ENST00000473494 OR6C6A6NF89 314 aa3.16□□□□□ -1.9
SEC22A-204ENST00000473494 RGS5O15539 181 aa3.16□□□□□ -1.9
SEC22A-204ENST00000473494 STK16O75716 305 aa3.16□□□□□ -1.9
SEC22A-204ENST00000473494 OR7C1O76099 320 aaPredicted RBP3.16□□□□□ -1.9
SEC22A-204ENST00000473494 HBZP02008 142 aa3.16□□□□□ -1.9
SEC22A-204ENST00000473494 PRB1P04280 392 aa3.16□□□□□ -1.9
SEC22A-204ENST00000473494 CRYGDP07320 174 aa3.16□□□□□ -1.9
SEC22A-204ENST00000473494 GUSBP08236 651 aa3.16□□□□□ -1.9
SEC22A-204ENST00000473494 OR4A8P0C604 315 aa3.16□□□□□ -1.9
SEC22A-204ENST00000473494 CD79AP11912 226 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms