RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 MIFP14174 115 aa9.05□□□□□ -0.96
TRAF4-209ENST00000473421 F2RP25116 425 aa9.05□□□□□ -0.96
TRAF4-209ENST00000473421 RANBP1P43487 201 aa9.05□□□□□ -0.96
TRAF4-209ENST00000473421 MFAP4P55083 255 aa9.05□□□□□ -0.96
TRAF4-209ENST00000473421 RPL11P62913 178 aaKnown RBP9.05□□□□□ -0.96
TRAF4-209ENST00000473421 RELQ04864 619 aaPredicted RBP9.05□□□□□ -0.96
TRAF4-209ENST00000473421 TBCEQ15813 527 aaPredicted RBP9.05□□□□□ -0.96
TRAF4-209ENST00000473421 SPINK9Q5DT21 86 aa9.05□□□□□ -0.96
TRAF4-209ENST00000473421 THOC7Q6I9Y2 204 aaKnown RBP9.05□□□□□ -0.96
TRAF4-209ENST00000473421 Q6ZR54 194 aa9.05□□□□□ -0.96
TRAF4-209ENST00000473421 HSD17B13Q7Z5P4 300 aaPredicted RBP9.05□□□□□ -0.96
TRAF4-209ENST00000473421 STHQ8IWL8 128 aa9.05□□□□□ -0.96
TRAF4-209ENST00000473421 PINX1Q96BK5 328 aaKnown RBP9.05□□□□□ -0.96
TRAF4-209ENST00000473421 CMTM3Q96MX0 182 aa9.05□□□□□ -0.96
TRAF4-209ENST00000473421 TMEM14BQ9NUH8 114 aa9.05□□□□□ -0.96
TRAF4-209ENST00000473421 TXNL4BQ9NX01 149 aaKnown RBP9.05□□□□□ -0.96
TRAF4-209ENST00000473421 K7EQG2 157 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 CYB5BO43169 146 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 IGKV1-39P01597 117 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 AMBPP02760 352 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 IGKV1D-39P04432 117 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 ZNF688P0C7X2 276 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 RFX2P48378 723 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 PPP5CP53041 499 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 ERVK-16P61578 105 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 MLANAQ16655 118 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 IZUMO4Q1ZYL8 232 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 UBE2UQ5VVX9 321 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 SFXN4Q6P4A7 337 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 VCXQ9H320 206 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 RABAC1Q9UI14 185 aa9.04□□□□□ -0.96
TRAF4-209ENST00000473421 PUS1Q9Y606 427 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRAF4-209ENST00000473421 HERC1Q15751 4861 aa9.03□□□□□ -0.96
TRAF4-209ENST00000473421 GNG7O60262 68 aa9.03□□□□□ -0.96
TRAF4-209ENST00000473421 PAFAH1B2P68402 229 aa9.03□□□□□ -0.96
TRAF4-209ENST00000473421 LGALS9BQ3B8N2 356 aa9.03□□□□□ -0.96
TRAF4-209ENST00000473421 ACTL10Q5JWF8 245 aa9.03□□□□□ -0.96
TRAF4-209ENST00000473421 OR5AP2Q8NGF4 316 aa9.03□□□□□ -0.96
TRAF4-209ENST00000473421 FXYD6Q9H0Q3 95 aa9.03□□□□□ -0.96
TRAF4-209ENST00000473421 AUNIPQ9H7T9 357 aa9.03□□□□□ -0.96
TRAF4-209ENST00000473421 PLA2G2EQ9NZK7 142 aa9.03□□□□□ -0.96
TRAF4-209ENST00000473421 TBC1D24Q9ULP9 559 aa9.03□□□□□ -0.96
TRAF4-209ENST00000473421 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.96
TRAF4-209ENST00000473421 NACAE9PAV3 2078 aa9.02□□□□□ -0.97
TRAF4-209ENST00000473421 SNAPC5O75971 98 aa9.02□□□□□ -0.97
TRAF4-209ENST00000473421 SDC2P34741 201 aa9.02□□□□□ -0.97
TRAF4-209ENST00000473421 MXD1Q05195 221 aa9.02□□□□□ -0.97
TRAF4-209ENST00000473421 DHRS11Q6UWP2 260 aa9.02□□□□□ -0.97
TRAF4-209ENST00000473421 STXBP6Q8NFX7 210 aa9.02□□□□□ -0.97
TRAF4-209ENST00000473421 DCANP1Q8TF63 244 aa9.02□□□□□ -0.97
TRAF4-209ENST00000473421 MOB3AQ96BX8 217 aa9.02□□□□□ -0.97
TRAF4-209ENST00000473421 TXN2Q99757 166 aa9.02□□□□□ -0.97
TRAF4-209ENST00000473421 EHFQ9NZC4 300 aa9.02□□□□□ -0.97
TRAF4-209ENST00000473421 PRNDQ9UKY0 176 aa9.02□□□□□ -0.97
TRAF4-209ENST00000473421 TRAV2A0A0B4J234 112 aa9.01□□□□□ -0.97
TRAF4-209ENST00000473421 A6NHS1 94 aa9.01□□□□□ -0.97
TRAF4-209ENST00000473421 TMEM50AO95807 157 aa9.01□□□□□ -0.97
TRAF4-209ENST00000473421 PMP2P02689 132 aa9.01□□□□□ -0.97
TRAF4-209ENST00000473421 CD74P04233 296 aa9.01□□□□□ -0.97
TRAF4-209ENST00000473421 P0DMU3 169 aa9.01□□□□□ -0.97
TRAF4-209ENST00000473421 FAM231AP0DMU4 169 aa9.01□□□□□ -0.97
TRAF4-209ENST00000473421 FAM231CP0DMU5 169 aa9.01□□□□□ -0.97
TRAF4-209ENST00000473421 FGF9P31371 208 aaPredicted RBP9.01□□□□□ -0.97
TRAF4-209ENST00000473421 PHLDA2Q53GA4 152 aa9.01□□□□□ -0.97
TRAF4-209ENST00000473421 DUSP18Q8NEJ0 188 aa9.01□□□□□ -0.97
TRAF4-209ENST00000473421 SEC22AQ96IW7 307 aa9.01□□□□□ -0.97
TRAF4-209ENST00000473421 TMEM56Q96MV1 263 aa9.01□□□□□ -0.97
TRAF4-209ENST00000473421 ZNF2Q9BSG1 426 aaPredicted RBP9.01□□□□□ -0.97
TRAF4-209ENST00000473421 NDUFAF3Q9BU61 184 aa9.01□□□□□ -0.97
TRAF4-209ENST00000473421 SCGNO76038 276 aa9□□□□□ -0.97
TRAF4-209ENST00000473421 SPP1P10451 314 aa9□□□□□ -0.97
TRAF4-209ENST00000473421 DEFB1P60022 68 aa9□□□□□ -0.97
TRAF4-209ENST00000473421 HERV-K104P61576 105 aa9□□□□□ -0.97
TRAF4-209ENST00000473421 GSG1LQ6UXU4 331 aa9□□□□□ -0.97
TRAF4-209ENST00000473421 ZNF600Q6ZNG1 722 aa9□□□□□ -0.97
TRAF4-209ENST00000473421 Q6ZRM9 215 aa9□□□□□ -0.97
TRAF4-209ENST00000473421 CADM3Q8N126 398 aa9□□□□□ -0.97
TRAF4-209ENST00000473421 ZNF114Q8NC26 417 aa9□□□□□ -0.97
TRAF4-209ENST00000473421 RAB40CQ96S21 281 aa9□□□□□ -0.97
TRAF4-209ENST00000473421 GINS3Q9BRX5 216 aa9□□□□□ -0.97
TRAF4-209ENST00000473421 VCX3BQ9H321 246 aa9□□□□□ -0.97
TRAF4-209ENST00000473421 FNDC4Q9H6D8 234 aaPredicted RBP9□□□□□ -0.97
TRAF4-209ENST00000473421 XCL2Q9UBD3 114 aa9□□□□□ -0.97
TRAF4-209ENST00000473421 EIF4EP06730 217 aaKnown RBP8.99□□□□□ -0.97
TRAF4-209ENST00000473421 P2RY1P47900 373 aa8.99□□□□□ -0.97
TRAF4-209ENST00000473421 PRCDQ00LT1 54 aa8.99□□□□□ -0.97
TRAF4-209ENST00000473421 IDNKQ5T6J7 187 aa8.99□□□□□ -0.97
TRAF4-209ENST00000473421 MORN3Q6PF18 240 aaPredicted RBP8.99□□□□□ -0.97
TRAF4-209ENST00000473421 TPRA1Q86W33 373 aa8.99□□□□□ -0.97
TRAF4-209ENST00000473421 LYSMD2Q8IV50 215 aa8.99□□□□□ -0.97
TRAF4-209ENST00000473421 CNBD2Q96M20 576 aa8.99□□□□□ -0.97
TRAF4-209ENST00000473421 NPPCP23582 126 aa8.98□□□□□ -0.97
TRAF4-209ENST00000473421 CRYBB3P26998 211 aa8.98□□□□□ -0.97
TRAF4-209ENST00000473421 EMP1P54849 157 aa8.98□□□□□ -0.97
TRAF4-209ENST00000473421 HSPE1P61604 102 aaKnown RBP8.98□□□□□ -0.97
TRAF4-209ENST00000473421 TNP2Q05952 138 aa8.98□□□□□ -0.97
TRAF4-209ENST00000473421 MRGPRFQ96AM1 343 aa8.98□□□□□ -0.97
TRAF4-209ENST00000473421 GRAMD2BQ96HH9 432 aa8.98□□□□□ -0.97
TRAF4-209ENST00000473421 FKBP11Q9NYL4 201 aa8.98□□□□□ -0.97
TRAF4-209ENST00000473421 ANAPC10Q9UM13 185 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms