RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 HUWE1Q7Z6Z7 4374 aaKnown RBP13.78□□□□□ -0.2
SNX4-204ENST00000473417 C9orf170A2RU37 121 aa13.78□□□□□ -0.2
SNX4-204ENST00000473417 UPK1BO75841 260 aa13.78□□□□□ -0.2
SNX4-204ENST00000473417 HLA-AP01891 365 aaKnown RBP13.78□□□□□ -0.2
SNX4-204ENST00000473417 TCRBP04435 133 aa13.78□□□□□ -0.2
SNX4-204ENST00000473417 OR4E1P0C645 316 aa13.78□□□□□ -0.2
SNX4-204ENST00000473417 SPNP16150 400 aa13.78□□□□□ -0.2
SNX4-204ENST00000473417 SNCAP37840 140 aa13.78□□□□□ -0.2
SNX4-204ENST00000473417 KLF5Q13887 457 aaPredicted RBP13.78□□□□□ -0.2
SNX4-204ENST00000473417 AARDQ4LEZ3 155 aa13.78□□□□□ -0.2
SNX4-204ENST00000473417 LRTM2Q8N967 370 aa13.78□□□□□ -0.2
SNX4-204ENST00000473417 OR52E5Q8NH55 327 aa13.78□□□□□ -0.2
SNX4-204ENST00000473417 MISP3Q96FF7 219 aa13.78□□□□□ -0.2
SNX4-204ENST00000473417 C20orf85Q9H1P6 137 aa13.78□□□□□ -0.2
SNX4-204ENST00000473417 TRBV7-1A0A0A6YYK4 115 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 PIGBOS1A0A0B4J2F0 54 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 DUXBA0A1W2PPF3 345 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 INS-IGF2F8WCM5 200 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 CLEC3BP05452 202 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 GP9P14770 177 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 ARL3P36405 182 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 SYNJ2BPP57105 145 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 IFITM3Q01628 133 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 DHRS2Q13268 280 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 SMCO1Q147U7 214 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 C4orf46Q504U0 113 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 FAM209BQ5JX69 171 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 ZNF114Q8NC26 417 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 ZNF502Q8TBZ5 544 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 VN1R17PQ8TDU5 208 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 ASCL2Q99929 193 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 ZC4H2Q9NQZ6 224 aa13.77□□□□□ -0.21
SNX4-204ENST00000473417 TRAV6A0A075B6T7 132 aa13.76□□□□□ -0.21
SNX4-204ENST00000473417 FAM240BA0A1B0GVZ2 78 aa13.76□□□□□ -0.21
SNX4-204ENST00000473417 CEBPZOSA8MTT3 80 aa13.76□□□□□ -0.21
SNX4-204ENST00000473417 K7EIM0 57 aa13.76□□□□□ -0.21
SNX4-204ENST00000473417 OR2C1O95371 312 aa13.76□□□□□ -0.21
SNX4-204ENST00000473417 HOXB5P09067 269 aa13.76□□□□□ -0.21
SNX4-204ENST00000473417 ASAH1Q13510 395 aa13.76□□□□□ -0.21
SNX4-204ENST00000473417 MZT2BQ6NZ67 158 aa13.76□□□□□ -0.21
SNX4-204ENST00000473417 LYG2Q86SG7 212 aa13.76□□□□□ -0.21
SNX4-204ENST00000473417 SCARB1Q8WTV0 552 aa13.76□□□□□ -0.21
SNX4-204ENST00000473417 OR4C12Q96R67 309 aa13.76□□□□□ -0.21
SNX4-204ENST00000473417 A0A1B0GU03 582 aa13.75□□□□□ -0.21
SNX4-204ENST00000473417 GGCTO75223 188 aaKnown RBP13.75□□□□□ -0.21
SNX4-204ENST00000473417 GPR183P32249 361 aa13.75□□□□□ -0.21
SNX4-204ENST00000473417 TATDN3Q17R31 274 aa13.75□□□□□ -0.21
SNX4-204ENST00000473417 OR1S1Q8NH92 325 aa13.75□□□□□ -0.21
SNX4-204ENST00000473417 COQ8AQ8NI60 647 aa13.75□□□□□ -0.21
SNX4-204ENST00000473417 PINX1Q96BK5 328 aaKnown RBP13.75□□□□□ -0.21
SNX4-204ENST00000473417 HEYLQ9NQ87 328 aaPredicted RBP13.75□□□□□ -0.21
SNX4-204ENST00000473417 NUDT15Q9NV35 164 aa13.75□□□□□ -0.21
SNX4-204ENST00000473417 C21orf62Q9NYP8 219 aa13.75□□□□□ -0.21
SNX4-204ENST00000473417 RYR3Q15413 4870 aa13.75□□□□□ -0.21
SNX4-204ENST00000473417 DNAH7Q8WXX0 4024 aa13.74□□□□□ -0.21
SNX4-204ENST00000473417 MT-CO2P00403 227 aa13.74□□□□□ -0.21
SNX4-204ENST00000473417 IGLV1-51P01701 117 aa13.74□□□□□ -0.21
SNX4-204ENST00000473417 RNASE2P10153 161 aaKnown RBP13.74□□□□□ -0.21
SNX4-204ENST00000473417 SUB1P53999 127 aaKnown RBP eCLIP13.74□□□□□ -0.21
SNX4-204ENST00000473417 OR52B4Q8NGK2 314 aa13.74□□□□□ -0.21
SNX4-204ENST00000473417 OR9G4Q8NGQ1 327 aa13.74□□□□□ -0.21
SNX4-204ENST00000473417 ELOVL1Q9BW60 279 aa13.74□□□□□ -0.21
SNX4-204ENST00000473417 TMED3Q9Y3Q3 217 aa13.74□□□□□ -0.21
SNX4-204ENST00000473417 OR2T8A6NH00 312 aa13.73□□□□□ -0.21
SNX4-204ENST00000473417 I3L2K1 104 aa13.73□□□□□ -0.21
SNX4-204ENST00000473417 ADAP1O75689 374 aa13.73□□□□□ -0.21
SNX4-204ENST00000473417 IGHV3-48P01763 117 aa13.73□□□□□ -0.21
SNX4-204ENST00000473417 TNFRSF9Q07011 255 aa13.73□□□□□ -0.21
SNX4-204ENST00000473417 Q56UQ5 140 aa13.73□□□□□ -0.21
SNX4-204ENST00000473417 GGNBP1Q5YKI7 109 aa13.73□□□□□ -0.21
SNX4-204ENST00000473417 PLET1Q6UQ28 207 aa13.73□□□□□ -0.21
SNX4-204ENST00000473417 HAPLN4Q86UW8 402 aa13.73□□□□□ -0.21
SNX4-204ENST00000473417 UBAC2Q8NBM4 344 aa13.73□□□□□ -0.21
SNX4-204ENST00000473417 CACFD1Q9UGQ2 172 aa13.73□□□□□ -0.21
SNX4-204ENST00000473417 PITX3O75364 302 aa13.72□□□□□ -0.21
SNX4-204ENST00000473417 H2AFB2P0C5Z0 115 aa13.72□□□□□ -0.21
SNX4-204ENST00000473417 ENKURQ8TC29 256 aa13.72□□□□□ -0.21
SNX4-204ENST00000473417 HIPK2Q9H2X6 1198 aa13.72□□□□□ -0.21
SNX4-204ENST00000473417 RBKSQ9H477 322 aa13.72□□□□□ -0.21
SNX4-204ENST00000473417 HSPB7Q9UBY9 170 aa13.72□□□□□ -0.21
SNX4-204ENST00000473417 IGHV3-35A0A0C4DH35 117 aa13.71□□□□□ -0.21
SNX4-204ENST00000473417 F8W735 103 aaPredicted RBP13.71□□□□□ -0.21
SNX4-204ENST00000473417 TGOLN2O43493 480 aa13.71□□□□□ -0.21
SNX4-204ENST00000473417 FRMD6-AS1P0C7T7 363 aa13.71□□□□□ -0.21
SNX4-204ENST00000473417 SLC25A6P12236 298 aa13.71□□□□□ -0.21
SNX4-204ENST00000473417 HTR2BP41595 481 aa13.71□□□□□ -0.21
SNX4-204ENST00000473417 BSXQ3C1V8 233 aa13.71□□□□□ -0.21
SNX4-204ENST00000473417 PVRIGQ6DKI7 326 aa13.71□□□□□ -0.21
SNX4-204ENST00000473417 IL34Q6ZMJ4 242 aa13.71□□□□□ -0.21
SNX4-204ENST00000473417 GPHB5Q86YW7 130 aa13.71□□□□□ -0.21
SNX4-204ENST00000473417 SBSPONQ8IVN8 264 aa13.71□□□□□ -0.21
SNX4-204ENST00000473417 DTD1Q8TEA8 209 aa13.71□□□□□ -0.21
SNX4-204ENST00000473417 ZNF320A2RRD8 509 aa13.7□□□□□ -0.22
SNX4-204ENST00000473417 MPTX1A8MV57 137 aa13.7□□□□□ -0.22
SNX4-204ENST00000473417 MFAP4P55083 255 aa13.7□□□□□ -0.22
SNX4-204ENST00000473417 SLC24A4Q8NFF2 622 aa13.7□□□□□ -0.22
SNX4-204ENST00000473417 MITD1Q8WV92 249 aa13.7□□□□□ -0.22
SNX4-204ENST00000473417 BSCL2Q96G97 398 aaPredicted RBP13.7□□□□□ -0.22
SNX4-204ENST00000473417 SEC22CQ9BRL7 303 aa13.7□□□□□ -0.22
SNX4-204ENST00000473417 PEMTQ9UBM1 199 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms