RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 TTRP02766 147 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 RPS20P60866 119 aaKnown RBP0.75□□□□□ -2.29
COPS3-206ENST00000471414 AESQ08117 197 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 AAED1Q7RTV5 226 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 PFN4Q8NHR9 129 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 TOMM6Q96B49 74 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 PPP1R14BQ96C90 147 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 C8orf76Q96K31 380 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 SCGB3A1Q96QR1 104 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 RETNLBQ9BQ08 111 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 ADAT1Q9BUB4 502 aaKnown RBP0.75□□□□□ -2.29
COPS3-206ENST00000471414 ULBP3Q9BZM4 244 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 C11orf68Q9H3H3 251 aaKnown RBP0.75□□□□□ -2.29
COPS3-206ENST00000471414 MED9Q9NWA0 146 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 CKLFQ9UBR5 152 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 TMEM56-RWDD3S4R434 201 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 ECM29Q5VYK3 1845 aa0.75□□□□□ -2.29
COPS3-206ENST00000471414 FREM1Q5H8C1 2179 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 CUL9Q8IWT3 2517 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 BRWD1Q9NSI6 2320 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 TRAV9-1A0A075B6T8 112 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 IGKV2-40A0A087WW87 121 aaPredicted RBP0.74□□□□□ -2.29
COPS3-206ENST00000471414 TRAV26-2A0A0B4J265 109 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 CRYZL1O95825 349 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 IGKV2D-40P01614 121 aaPredicted RBP0.74□□□□□ -2.29
COPS3-206ENST00000471414 TCRBP04435 133 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 UBBP0CG47 229 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 LYNX1P0DP58 116 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 G6PCP35575 357 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 CDKN2CP42773 168 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 LSM6P62312 80 aaKnown RBP0.74□□□□□ -2.29
COPS3-206ENST00000471414 RANP62826 216 aaKnown RBP0.74□□□□□ -2.29
COPS3-206ENST00000471414 RUNX1Q01196 453 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 CDK5R1Q15078 307 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 LCN15Q6UWW0 184 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 MIR17HGQ75NE6 70 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 BPIFA4PQ86YQ2 179 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 Q8N2B8 174 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 WFDC11Q8NEX6 87 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 TERB2Q8NHR7 220 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 C10orf105Q8TEF2 133 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 H1FXQ92522 213 aaKnown RBP0.74□□□□□ -2.29
COPS3-206ENST00000471414 CMSS1Q9BQ75 279 aaKnown RBP0.74□□□□□ -2.29
COPS3-206ENST00000471414 TMEM147Q9BVK8 224 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 C20orf27Q9GZN8 174 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 UCK1Q9HA47 277 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.74□□□□□ -2.29
COPS3-206ENST00000471414 SOX21Q9Y651 276 aaPredicted RBP0.74□□□□□ -2.29
COPS3-206ENST00000471414 BAZ2BQ9UIF8 2168 aaKnown RBP0.74□□□□□ -2.29
COPS3-206ENST00000471414 ANAPC1Q9H1A4 1944 aa0.74□□□□□ -2.29
COPS3-206ENST00000471414 NEO1Q92859 1461 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 NCOA1Q15788 1441 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 COL4A5P29400 1685 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 MICAL3Q7RTP6 2002 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 A0A087WUJ7 227 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 FAM236DA0A1B0GTK5 79 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 FUOMA2VDF0 154 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 SMIM9A6NGZ8 99 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 TMEM212A6NML5 194 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 PIRO00625 290 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 E2F6O75461 281 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 OR5F1O95221 314 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 CNIH1O95406 144 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 HTR1AP08908 422 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 SMIM10L2AP0DMW4 78 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 SMIM10L2BP0DMW5 78 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 FAM236CP0DP71 79 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 DEFA1P59665 94 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 EDDM3AQ14507 147 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 ZNF846Q147U1 533 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 IAH1Q2TAA2 248 aaPredicted RBP0.73□□□□□ -2.29
COPS3-206ENST00000471414 C10orf55Q5SWW7 151 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 ZNF826PQ6ZT77 177 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 DEFB128Q7Z7B8 93 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 CLVS1Q8IUQ0 354 aaPredicted RBP0.73□□□□□ -2.29
COPS3-206ENST00000471414 C15orf53Q8NAA6 179 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 OR4D11Q8NGI4 311 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 DNAJC9Q8WXX5 260 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 BORCS7Q96B45 105 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 GINS4Q9BRT9 223 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 DCSTAMPQ9H295 470 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 OR51V1Q9H2C8 321 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 SLC39A9Q9NUM3 307 aa0.73□□□□□ -2.29
COPS3-206ENST00000471414 ZNF106Q9H2Y7 1883 aaKnown RBP0.73□□□□□ -2.29
COPS3-206ENST00000471414 RIC1Q4ADV7 1423 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 ROBO3Q96MS0 1386 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 PLXND1Q9Y4D7 1925 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 IGKV3-7A0A075B6H7 116 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 IGKV1D-42A0A075B6H8 117 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 A0A0D9SG52 128 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 BUB1B-PAK6H3BSN5 160 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 OR2J2O76002 312 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 SHBGP04278 402 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 CTSDP07339 412 aaPredicted RBP0.72□□□□□ -2.29
COPS3-206ENST00000471414 RBP1P09455 135 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 CRYGAP11844 174 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 COX6A1P12074 109 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 CDC42P60953 191 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 CCL7P80098 99 aa0.72□□□□□ -2.29
COPS3-206ENST00000471414 SRSF6Q13247 344 aaKnown RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms