RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 CORTO00230 105 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 MBP02144 154 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 OPN1MWP04001 364 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 OPN1MW2P0DN77 364 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 OPN1MW3P0DN78 364 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 RNASE2P10153 161 aaKnown RBP4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 MYOD1P15172 320 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 TMEM11P17152 192 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 MDKP21741 143 aaPredicted RBP4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 CNTFRP26992 372 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 SAA4P35542 130 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 GPX4P36969 197 aaPredicted RBP4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 HNF4GQ14541 408 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 MMDQ15546 238 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 TNXAQ16473 311 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 MRGPRG-AS1Q2M3A8 158 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 BSXQ3C1V8 233 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 Q5PR19 223 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 FAM74A1Q5RGS3 127 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 AKR1C8PQ5T2L2 129 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 COMMD7Q86VX2 200 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 DYNAPQ8N1N2 210 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 COMMD1Q8N668 190 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 Q8N6K4 173 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 ZNF709Q8N972 641 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 OR1L6Q8NGR2 347 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 RNASEH2CQ8TDP1 164 aaKnown RBP4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 CACNG8Q8WXS5 425 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 TAF15Q92804 592 aaKnown RBP eCLIP4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 MARC2Q969Z3 335 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 FBXL15Q9H469 300 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 PARP11Q9NR21 331 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 HIF1ANQ9NWT6 349 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 USF3Q68DE3 2245 aa4.84□□□□□ -1.64
SMNDC1-204ENST00000471297 TRGV11A0A075B6L2 103 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 TRAV40A0A0B4J280 105 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 UBE2L5PA0A1B0GUS4 154 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 RAB19A4D1S5 217 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 CGB1A6NKQ9 187 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 E7EUB6 86 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 F5H697 171 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 CYB5BO43169 146 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 CNIH1O95406 144 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 TGFAP01135 160 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 PRH1P02810 166 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 OR13C7P0DN81 318 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 FGF7P21781 194 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 CAMLGP49069 296 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 RAB2AP61019 212 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 PJVKQ0ZLH3 352 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 RAB31Q13636 194 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 AANATQ16613 207 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 C5orf64Q2M2E5 130 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 CYB5R2Q6BCY4 276 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 PVRIGQ6DKI7 326 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 ETFRF1Q6IPR1 90 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 BTNL8Q6UX41 500 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 ZNF562Q6V9R5 426 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 IL34Q6ZMJ4 242 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 TMEM182Q6ZP80 229 aaPredicted RBP4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 TMEM144Q7Z5S9 345 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 EIF4E3Q8N5X7 224 aaKnown RBP4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 TEX29Q8N6K0 151 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 ZNF114Q8NC26 417 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 OR10W1Q8NGF6 305 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 LYPD6BQ8NI32 183 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 PCNPQ8WW12 178 aaKnown RBP4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 SRSF12Q8WXF0 261 aaKnown RBP4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 RBMXL1Q96E39 390 aaKnown RBP4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 CXorf58Q96LI9 332 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 RASL11BQ9BPW5 248 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 SH3BGRL3Q9H299 93 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 KCNIP2Q9NS61 270 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 WDR83OSQ9Y284 106 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 FAM96BQ9Y3D0 163 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 FBXO7Q9Y3I1 522 aa4.83□□□□□ -1.64
SMNDC1-204ENST00000471297 ZNF462Q96JM2 2506 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 IGLC7A0M8Q6 106 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 SMCO3A2RU48 225 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 BTBD17A6NE02 478 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 MFSD2BA6NFX1 497 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 NCBP2LA6PVI3 153 aaKnown RBP4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 TEX46H3BTG2 121 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 FCN1O00602 326 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 HBE1P02100 147 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 FBP1P09467 338 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 IGHV4-31P0DP07 118 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 GNB1P62873 340 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 RUNX1Q01196 453 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 WT1-ASQ06250 92 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 FHL2Q14192 279 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 FXYD3Q14802 87 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 TMEM249Q2WGJ8 235 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 ACOT6Q3I5F7 207 aaPredicted RBP4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 TMEM41BQ5BJD5 291 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 C10orf55Q5SWW7 151 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 PXDC1Q5TGL8 231 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 UQCC3Q6UW78 93 aa4.82□□□□□ -1.64
SMNDC1-204ENST00000471297 Q8N9W7 124 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms