RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 RNASE11Q8TAA1 199 aaKnown RBP10.7□□□□□ -0.7
TOP3B-215ENST00000470338 PDCD10Q9BUL8 212 aa10.7□□□□□ -0.7
TOP3B-215ENST00000470338 TECRQ9NZ01 308 aaKnown RBP10.7□□□□□ -0.7
TOP3B-215ENST00000470338 CTSGP08311 255 aa10.69□□□□□ -0.7
TOP3B-215ENST00000470338 C8orf88P0DMB2 117 aa10.69□□□□□ -0.7
TOP3B-215ENST00000470338 ADMP35318 185 aa10.69□□□□□ -0.7
TOP3B-215ENST00000470338 SNCAP37840 140 aa10.69□□□□□ -0.7
TOP3B-215ENST00000470338 SPCS3P61009 180 aa10.69□□□□□ -0.7
TOP3B-215ENST00000470338 BAK1Q16611 211 aa10.69□□□□□ -0.7
TOP3B-215ENST00000470338 CD300EQ496F6 205 aaPredicted RBP10.69□□□□□ -0.7
TOP3B-215ENST00000470338 MISP3Q96FF7 219 aa10.69□□□□□ -0.7
TOP3B-215ENST00000470338 SDHCQ99643 169 aaPredicted RBP10.69□□□□□ -0.7
TOP3B-215ENST00000470338 TXN2Q99757 166 aa10.69□□□□□ -0.7
TOP3B-215ENST00000470338 SLC25A21Q9BQT8 299 aaPredicted RBP10.69□□□□□ -0.7
TOP3B-215ENST00000470338 CHRDL1Q9BU40 450 aa10.69□□□□□ -0.7
TOP3B-215ENST00000470338 PALMDQ9NP74 551 aa10.69□□□□□ -0.7
TOP3B-215ENST00000470338 GAR1Q9NY12 217 aaKnown RBP10.69□□□□□ -0.7
TOP3B-215ENST00000470338 A0A0B4J2A0 478 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 IGHV3-35A0A0C4DH35 117 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 ZNF785A8K8V0 405 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 A8MZ25 164 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 NDUFA4O00483 81 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 MT-CO2P00403 227 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 RNASE2P10153 161 aaKnown RBP10.68□□□□□ -0.7
TOP3B-215ENST00000470338 SUB1P53999 127 aaKnown RBP eCLIP10.68□□□□□ -0.7
TOP3B-215ENST00000470338 MFAP4P55083 255 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 BSXQ3C1V8 233 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 TM4SF20Q53R12 229 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 Q56UQ5 140 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 TMEM128Q5BJH2 165 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 ZNF57Q68EA5 555 aaPredicted RBP10.68□□□□□ -0.7
TOP3B-215ENST00000470338 C11orf87Q6NUJ2 197 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 UXS1Q8NBZ7 420 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 DYNLRB2Q8TF09 96 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 CACNG8Q8WXS5 425 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 TMEM190Q8WZ59 177 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 MARC2Q969Z3 335 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 PRR13Q9NZ81 148 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 CACNG5Q9UF02 275 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 SHPKQ9UHJ6 478 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 UFC1Q9Y3C8 167 aa10.68□□□□□ -0.7
TOP3B-215ENST00000470338 FRMD6-AS1P0C7T7 363 aa10.67□□□□□ -0.7
TOP3B-215ENST00000470338 ANXA3P12429 323 aa10.67□□□□□ -0.7
TOP3B-215ENST00000470338 HOXA1P49639 335 aaPredicted RBP10.67□□□□□ -0.7
TOP3B-215ENST00000470338 SRPXP78539 464 aa10.67□□□□□ -0.7
TOP3B-215ENST00000470338 NMSQ5H8A3 153 aa10.67□□□□□ -0.7
TOP3B-215ENST00000470338 LYZL2Q7Z4W2 148 aa10.67□□□□□ -0.7
TOP3B-215ENST00000470338 LGI3Q8N145 548 aa10.67□□□□□ -0.7
TOP3B-215ENST00000470338 UBAC2Q8NBM4 344 aa10.67□□□□□ -0.7
TOP3B-215ENST00000470338 ZNF414Q96IQ9 312 aa10.67□□□□□ -0.7
TOP3B-215ENST00000470338 ENY2Q9NPA8 101 aa10.67□□□□□ -0.7
TOP3B-215ENST00000470338 BATF3Q9NR55 127 aa10.67□□□□□ -0.7
TOP3B-215ENST00000470338 C19orf73Q9NVV2 129 aa10.67□□□□□ -0.7
TOP3B-215ENST00000470338 MRPL27Q9P0M9 148 aaKnown RBP10.67□□□□□ -0.7
TOP3B-215ENST00000470338 CACFD1Q9UGQ2 172 aa10.67□□□□□ -0.7
TOP3B-215ENST00000470338 MLXQ9UH92 298 aa10.67□□□□□ -0.7
TOP3B-215ENST00000470338 NAP1L6A6NFF2 107 aa10.66□□□□□ -0.7
TOP3B-215ENST00000470338 SULT1A3P0DMM9 295 aa10.66□□□□□ -0.7
TOP3B-215ENST00000470338 SULT1A4P0DMN0 295 aa10.66□□□□□ -0.7
TOP3B-215ENST00000470338 IGHV4-30-4P0DP06 118 aa10.66□□□□□ -0.7
TOP3B-215ENST00000470338 TRIQKQ629K1 86 aa10.66□□□□□ -0.7
TOP3B-215ENST00000470338 TMED4Q7Z7H5 227 aa10.66□□□□□ -0.7
TOP3B-215ENST00000470338 SBSPONQ8IVN8 264 aa10.66□□□□□ -0.7
TOP3B-215ENST00000470338 PINX1Q96BK5 328 aaKnown RBP10.66□□□□□ -0.7
TOP3B-215ENST00000470338 ASCL2Q99929 193 aa10.66□□□□□ -0.7
TOP3B-215ENST00000470338 HUWE1Q7Z6Z7 4374 aaKnown RBP10.66□□□□□ -0.7
TOP3B-215ENST00000470338 PIGBOS1A0A0B4J2F0 54 aa10.65□□□□□ -0.7
TOP3B-215ENST00000470338 K7EMT4 169 aa10.65□□□□□ -0.7
TOP3B-215ENST00000470338 CORTO00230 105 aa10.65□□□□□ -0.7
TOP3B-215ENST00000470338 NUPL2O15504 423 aaKnown RBP10.65□□□□□ -0.7
TOP3B-215ENST00000470338 IGHV3-48P01763 117 aa10.65□□□□□ -0.7
TOP3B-215ENST00000470338 CCR6P51684 374 aa10.65□□□□□ -0.7
TOP3B-215ENST00000470338 RBMS2Q15434 407 aaKnown RBP10.65□□□□□ -0.7
TOP3B-215ENST00000470338 GTSCR1Q86UQ5 136 aa10.65□□□□□ -0.7
TOP3B-215ENST00000470338 LRTM2Q8N967 370 aa10.65□□□□□ -0.7
TOP3B-215ENST00000470338 DAZ1Q9NQZ3 744 aaKnown RBP10.65□□□□□ -0.7
TOP3B-215ENST00000470338 TRAV25A0A0B4J276 109 aa10.64□□□□□ -0.71
TOP3B-215ENST00000470338 DUXBA0A1W2PPF3 345 aa10.64□□□□□ -0.71
TOP3B-215ENST00000470338 C15orf62A8K5M9 175 aa10.64□□□□□ -0.71
TOP3B-215ENST00000470338 HTR2BP41595 481 aa10.64□□□□□ -0.71
TOP3B-215ENST00000470338 NPBWR1P48145 328 aa10.64□□□□□ -0.71
TOP3B-215ENST00000470338 INPP1P49441 399 aa10.64□□□□□ -0.71
TOP3B-215ENST00000470338 RELQ04864 619 aaPredicted RBP10.64□□□□□ -0.71
TOP3B-215ENST00000470338 SMCO1Q147U7 214 aa10.64□□□□□ -0.71
TOP3B-215ENST00000470338 ANKRD55Q3KP44 614 aa10.64□□□□□ -0.71
TOP3B-215ENST00000470338 C2orf83Q53S99 150 aa10.64□□□□□ -0.71
TOP3B-215ENST00000470338 TMEM61Q8N0U2 210 aa10.64□□□□□ -0.71
TOP3B-215ENST00000470338 CENPSQ8N2Z9 138 aa10.64□□□□□ -0.71
TOP3B-215ENST00000470338 DUSP18Q8NEJ0 188 aa10.64□□□□□ -0.71
TOP3B-215ENST00000470338 WDR89Q96FK6 387 aaPredicted RBP10.64□□□□□ -0.71
TOP3B-215ENST00000470338 FNDC4Q9H6D8 234 aaPredicted RBP10.64□□□□□ -0.71
TOP3B-215ENST00000470338 HEYLQ9NQ87 328 aaPredicted RBP10.64□□□□□ -0.71
TOP3B-215ENST00000470338 HSPB7Q9UBY9 170 aa10.64□□□□□ -0.71
TOP3B-215ENST00000470338 A0A1B0GU03 582 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 CEBPZOSA8MTT3 80 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 GNG7O60262 68 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 NDUFB6O95139 128 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 SFT2D2O95562 160 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 TMEM50AO95807 157 aa10.63□□□□□ -0.71
TOP3B-215ENST00000470338 IL7P13232 177 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms