RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 TRAM1Q15629 374 aa6.54□□□□□ -1.36
CCDC171-204ENST00000470191 LCE1DQ5T752 114 aa6.54□□□□□ -1.36
CCDC171-204ENST00000470191 AADACL3Q5VUY0 350 aa6.54□□□□□ -1.36
CCDC171-204ENST00000470191 HACD4Q5VWC8 232 aa6.54□□□□□ -1.36
CCDC171-204ENST00000470191 MORN3Q6PF18 240 aaPredicted RBP6.54□□□□□ -1.36
CCDC171-204ENST00000470191 TMEM17Q86X19 198 aa6.54□□□□□ -1.36
CCDC171-204ENST00000470191 DUSP18Q8NEJ0 188 aa6.54□□□□□ -1.36
CCDC171-204ENST00000470191 LSM10Q969L4 123 aaKnown RBP6.54□□□□□ -1.36
CCDC171-204ENST00000470191 GINS3Q9BRX5 216 aa6.54□□□□□ -1.36
CCDC171-204ENST00000470191 CCDC90BQ9GZT6 254 aa6.54□□□□□ -1.36
CCDC171-204ENST00000470191 NXF2Q9GZY0 626 aaKnown RBP6.54□□□□□ -1.36
CCDC171-204ENST00000470191 DCSTAMPQ9H295 470 aa6.54□□□□□ -1.36
CCDC171-204ENST00000470191 NDUFA4L2Q9NRX3 87 aa6.54□□□□□ -1.36
CCDC171-204ENST00000470191 RBFOX2O43251 390 aaKnown RBP eCLIP6.53□□□□□ -1.36
CCDC171-204ENST00000470191 SNAPC5O75971 98 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 MT-CO2P00403 227 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 KRASP01116 189 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 PPYP01298 95 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 RAB3BP20337 219 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 MYL9P24844 172 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 G6PCP35575 357 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 RCN1Q15293 331 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 POU2AF1Q16633 256 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 THOC7Q6I9Y2 204 aaKnown RBP6.53□□□□□ -1.36
CCDC171-204ENST00000470191 TOMM20LQ6UXN7 152 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 ZNF818PQ6ZRF7 136 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 HSD17B13Q7Z5P4 300 aaPredicted RBP6.53□□□□□ -1.36
CCDC171-204ENST00000470191 Q8N1X5 172 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 MOB3AQ96BX8 217 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 ATP6V0BQ99437 205 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 SCN3BQ9NY72 215 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 XCL2Q9UBD3 114 aa6.53□□□□□ -1.36
CCDC171-204ENST00000470191 PUS1Q9Y606 427 aaKnown RBP eCLIP6.53□□□□□ -1.36
CCDC171-204ENST00000470191 IGHV3OR16-12A0A075B7B8 117 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 ERICH4A6NGS2 130 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 DBX1A6NMT0 343 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 MARCH11A6NNE9 402 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 I3L2K1 104 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 K7EQG2 157 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 CD74P04233 296 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 RLN1P04808 185 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 PSMA1P25786 263 aaKnown RBP6.52□□□□□ -1.37
CCDC171-204ENST00000470191 LPAR6P43657 344 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 ARL6IP1Q15041 203 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 TMEM41BQ5BJD5 291 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 TPRA1Q86W33 373 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 PACRGLQ8N7B6 248 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 CSNK1G2-AS1Q8NCQ2 148 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 BEST4Q8NFU0 473 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 TSPAN14Q8NG11 270 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 TMEM56Q96MV1 263 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 VSIRQ9H7M9 311 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 PLEKHA2Q9HB19 425 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 ACOT13Q9NPJ3 140 aa6.52□□□□□ -1.37
CCDC171-204ENST00000470191 MEIS3P1A6NDR6 274 aa6.51□□□□□ -1.37
CCDC171-204ENST00000470191 CASQ2O14958 399 aaPredicted RBP6.51□□□□□ -1.37
CCDC171-204ENST00000470191 CD5P06127 495 aa6.51□□□□□ -1.37
CCDC171-204ENST00000470191 PPP5CP53041 499 aa6.51□□□□□ -1.37
CCDC171-204ENST00000470191 FXYD7P58549 80 aa6.51□□□□□ -1.37
CCDC171-204ENST00000470191 MLLT11Q13015 90 aaPredicted RBP6.51□□□□□ -1.37
CCDC171-204ENST00000470191 SPINK9Q5DT21 86 aa6.51□□□□□ -1.37
CCDC171-204ENST00000470191 PSMG4Q5JS54 123 aa6.51□□□□□ -1.37
CCDC171-204ENST00000470191 ZBTB34Q8NCN2 500 aa6.51□□□□□ -1.37
CCDC171-204ENST00000470191 MGLLQ99685 303 aa6.51□□□□□ -1.37
CCDC171-204ENST00000470191 TXN2Q99757 166 aa6.51□□□□□ -1.37
CCDC171-204ENST00000470191 TMEM231Q9H6L2 316 aa6.51□□□□□ -1.37
CCDC171-204ENST00000470191 COMMD9Q9P000 198 aa6.51□□□□□ -1.37
CCDC171-204ENST00000470191 TRAV2A0A0B4J234 112 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 TRAV1-2A0A0B4J238 106 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 A0A1B0GU03 582 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 EREGO14944 169 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 RGS10O43665 173 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 IGKV3-20P01619 116 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 SPART-AS1P0CW21 52 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 NPPCP23582 126 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 VAMP1P23763 118 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 P2RY1P47900 373 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 HERV-K104P61576 105 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 DHRS2Q13268 280 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 C22orf42Q6IC83 251 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 ZNF600Q6ZNG1 722 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 OR1P1Q8NH06 330 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 FCAMRQ8WWV6 532 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 RAB40CQ96S21 281 aa6.5□□□□□ -1.37
CCDC171-204ENST00000470191 TRAV18A0A075B6X5 111 aa6.49□□□□□ -1.37
CCDC171-204ENST00000470191 F2RP25116 425 aa6.49□□□□□ -1.37
CCDC171-204ENST00000470191 MSMO1Q15800 293 aa6.49□□□□□ -1.37
CCDC171-204ENST00000470191 RNF212Q495C1 297 aa6.49□□□□□ -1.37
CCDC171-204ENST00000470191 TMEM88Q6PEY1 159 aa6.49□□□□□ -1.37
CCDC171-204ENST00000470191 LGALS14Q8TCE9 139 aa6.49□□□□□ -1.37
CCDC171-204ENST00000470191 GRAMD2BQ96HH9 432 aa6.49□□□□□ -1.37
CCDC171-204ENST00000470191 ATG101Q9BSB4 218 aa6.49□□□□□ -1.37
CCDC171-204ENST00000470191 C8orf4Q9NR00 106 aa6.49□□□□□ -1.37
CCDC171-204ENST00000470191 DAPK2Q9UIK4 370 aa6.49□□□□□ -1.37
CCDC171-204ENST00000470191 PRNDQ9UKY0 176 aa6.49□□□□□ -1.37
CCDC171-204ENST00000470191 TPRKBQ9Y3C4 175 aa6.49□□□□□ -1.37
CCDC171-204ENST00000470191 TMED3Q9Y3Q3 217 aa6.49□□□□□ -1.37
CCDC171-204ENST00000470191 A0A1W2PS18 150 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 HELTA6NFD8 242 aa6.48□□□□□ -1.37
CCDC171-204ENST00000470191 PGLYRP1O75594 196 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms