RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 NANOS2P60321 138 aaKnown RBP12.67□□□□□ -0.38
TRIM56-203ENST00000467847 PAFAH1B2P68402 229 aa12.67□□□□□ -0.38
TRIM56-203ENST00000467847 KCTD21Q4G0X4 260 aa12.67□□□□□ -0.38
TRIM56-203ENST00000467847 FAM90A2PQ658T7 463 aa12.67□□□□□ -0.38
TRIM56-203ENST00000467847 LGALS9CQ6DKI2 356 aa12.67□□□□□ -0.38
TRIM56-203ENST00000467847 TCF24Q7RTU0 167 aa12.67□□□□□ -0.38
TRIM56-203ENST00000467847 OR11H2Q8NH07 326 aa12.67□□□□□ -0.38
TRIM56-203ENST00000467847 C11orf45Q8TAV5 145 aa12.67□□□□□ -0.38
TRIM56-203ENST00000467847 GINS3Q9BRX5 216 aa12.67□□□□□ -0.38
TRIM56-203ENST00000467847 MFFQ9GZY8 342 aa12.67□□□□□ -0.38
TRIM56-203ENST00000467847 C11orf68Q9H3H3 251 aaKnown RBP12.67□□□□□ -0.38
TRIM56-203ENST00000467847 FBXL17Q9UF56 701 aa12.67□□□□□ -0.38
TRIM56-203ENST00000467847 IGKV1-39P01597 117 aa12.66□□□□□ -0.38
TRIM56-203ENST00000467847 IGKV1D-39P04432 117 aa12.66□□□□□ -0.38
TRIM56-203ENST00000467847 CD5P06127 495 aa12.66□□□□□ -0.38
TRIM56-203ENST00000467847 HSPE1P61604 102 aaKnown RBP12.66□□□□□ -0.38
TRIM56-203ENST00000467847 LSM3P62310 102 aaKnown RBP12.66□□□□□ -0.38
TRIM56-203ENST00000467847 ERHP84090 104 aaKnown RBP12.66□□□□□ -0.38
TRIM56-203ENST00000467847 RBMS2Q15434 407 aaKnown RBP12.66□□□□□ -0.38
TRIM56-203ENST00000467847 MRGPRFQ96AM1 343 aa12.66□□□□□ -0.38
TRIM56-203ENST00000467847 ST8SIA3O43173 380 aa12.65□□□□□ -0.38
TRIM56-203ENST00000467847 CA1P00915 261 aaPredicted RBP12.65□□□□□ -0.38
TRIM56-203ENST00000467847 IFNA4P05014 189 aa12.65□□□□□ -0.38
TRIM56-203ENST00000467847 TOMM20LQ6UXN7 152 aa12.65□□□□□ -0.38
TRIM56-203ENST00000467847 GPX8Q8TED1 209 aa12.65□□□□□ -0.38
TRIM56-203ENST00000467847 ST8SIA2Q92186 375 aa12.65□□□□□ -0.38
TRIM56-203ENST00000467847 RYR1P21817 5038 aa12.65□□□□□ -0.38
TRIM56-203ENST00000467847 SMIM31A0A1B0GVY4 71 aa12.64□□□□□ -0.39
TRIM56-203ENST00000467847 DNASE2O00115 360 aaPredicted RBP12.64□□□□□ -0.39
TRIM56-203ENST00000467847 RPL11P62913 178 aaKnown RBP12.64□□□□□ -0.39
TRIM56-203ENST00000467847 SPINK9Q5DT21 86 aa12.64□□□□□ -0.39
TRIM56-203ENST00000467847 SNX29P2Q8IUI4 249 aa12.64□□□□□ -0.39
TRIM56-203ENST00000467847 DUSP18Q8NEJ0 188 aa12.64□□□□□ -0.39
TRIM56-203ENST00000467847 MS4A6AQ9H2W1 248 aa12.64□□□□□ -0.39
TRIM56-203ENST00000467847 SCPEP1Q9HB40 452 aa12.64□□□□□ -0.39
TRIM56-203ENST00000467847 IGHV3-66A0A0C4DH42 116 aa12.63□□□□□ -0.39
TRIM56-203ENST00000467847 DEFB4AO15263 64 aa12.63□□□□□ -0.39
TRIM56-203ENST00000467847 DFFBO76075 338 aa12.63□□□□□ -0.39
TRIM56-203ENST00000467847 APOHP02749 345 aaPredicted RBP12.63□□□□□ -0.39
TRIM56-203ENST00000467847 RCVRNP35243 200 aa12.63□□□□□ -0.39
TRIM56-203ENST00000467847 NPBWR1P48145 328 aa12.63□□□□□ -0.39
TRIM56-203ENST00000467847 UCP3P55916 312 aa12.63□□□□□ -0.39
TRIM56-203ENST00000467847 TMEM187Q14656 261 aa12.63□□□□□ -0.39
TRIM56-203ENST00000467847 IZUMO4Q1ZYL8 232 aa12.63□□□□□ -0.39
TRIM56-203ENST00000467847 LEMD1Q68G75 181 aa12.63□□□□□ -0.39
TRIM56-203ENST00000467847 LILRB2Q8N423 598 aa12.63□□□□□ -0.39
TRIM56-203ENST00000467847 YIPF6Q96EC8 236 aa12.63□□□□□ -0.39
TRIM56-203ENST00000467847 VSIRQ9H7M9 311 aa12.63□□□□□ -0.39
TRIM56-203ENST00000467847 COMMD3Q9UBI1 195 aa12.63□□□□□ -0.39
TRIM56-203ENST00000467847 PUS1Q9Y606 427 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIM56-203ENST00000467847 DNAH10Q8IVF4 4471 aa12.62□□□□□ -0.39
TRIM56-203ENST00000467847 SNCAP37840 140 aa12.62□□□□□ -0.39
TRIM56-203ENST00000467847 DEFB131AP59861 70 aa12.62□□□□□ -0.39
TRIM56-203ENST00000467847 ZNF600Q6ZNG1 722 aa12.62□□□□□ -0.39
TRIM56-203ENST00000467847 SLC35G3Q8N808 338 aa12.62□□□□□ -0.39
TRIM56-203ENST00000467847 C2CD4CQ8TF44 421 aa12.62□□□□□ -0.39
TRIM56-203ENST00000467847 TRAV2A0A0B4J234 112 aa12.61□□□□□ -0.39
TRIM56-203ENST00000467847 APOA1P02647 267 aa12.61□□□□□ -0.39
TRIM56-203ENST00000467847 TMEM231Q9H6L2 316 aa12.61□□□□□ -0.39
TRIM56-203ENST00000467847 ZFAND3Q9H8U3 227 aa12.61□□□□□ -0.39
TRIM56-203ENST00000467847 VCX3AQ9NNX9 186 aa12.61□□□□□ -0.39
TRIM56-203ENST00000467847 RABAC1Q9UI14 185 aa12.61□□□□□ -0.39
TRIM56-203ENST00000467847 AGRNO00468 2067 aa12.61□□□□□ -0.39
TRIM56-203ENST00000467847 M0QYG6 137 aa12.6□□□□□ -0.39
TRIM56-203ENST00000467847 IFNA17P01571 189 aa12.6□□□□□ -0.39
TRIM56-203ENST00000467847 PGAM2P15259 253 aa12.6□□□□□ -0.39
TRIM56-203ENST00000467847 STHQ8IWL8 128 aa12.6□□□□□ -0.39
TRIM56-203ENST00000467847 FAM24BQ8N5W8 94 aa12.6□□□□□ -0.39
TRIM56-203ENST00000467847 A0A0B4J293 547 aa12.59□□□□□ -0.39
TRIM56-203ENST00000467847 A0A1B0GU03 582 aa12.59□□□□□ -0.39
TRIM56-203ENST00000467847 TMEM50AO95807 157 aa12.59□□□□□ -0.39
TRIM56-203ENST00000467847 IGKV1-5P01602 117 aa12.59□□□□□ -0.39
TRIM56-203ENST00000467847 PI3P19957 117 aa12.59□□□□□ -0.39
TRIM56-203ENST00000467847 AKR1C2P52895 323 aa12.59□□□□□ -0.39
TRIM56-203ENST00000467847 SUB1P53999 127 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRIM56-203ENST00000467847 RND3P61587 244 aa12.59□□□□□ -0.39
TRIM56-203ENST00000467847 PDCD10Q9BUL8 212 aa12.59□□□□□ -0.39
TRIM56-203ENST00000467847 VPS13DQ5THJ4 4388 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 A0A1W2PS18 150 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 INS-IGF2F8WCM5 200 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 CORTO00230 105 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 ATG12O94817 140 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 ELK1P19419 428 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 NPPCP23582 126 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 HOXA1P49639 335 aaPredicted RBP12.58□□□□□ -0.4
TRIM56-203ENST00000467847 PIGPP57054 158 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 TCTAP57738 103 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 PRR20EP86478 221 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 PRR20CP86479 221 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 PRR20DP86480 221 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 PRR20BP86481 221 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 PRR20AP86496 221 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 STXBP6Q8NFX7 210 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 ZNF486Q96H40 463 aaPredicted RBP12.58□□□□□ -0.4
TRIM56-203ENST00000467847 TP53RKQ96S44 253 aa12.58□□□□□ -0.4
TRIM56-203ENST00000467847 HECTD4Q9Y4D8 3996 aa12.57□□□□□ -0.4
TRIM56-203ENST00000467847 A0A087WXM4 84 aa12.57□□□□□ -0.4
TRIM56-203ENST00000467847 HPGDSO60760 199 aa12.57□□□□□ -0.4
TRIM56-203ENST00000467847 P0C879 139 aa12.57□□□□□ -0.4
TRIM56-203ENST00000467847 RNASE2P10153 161 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms