RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SLC25A33Q9BSK2 321 aa16.16■□□□□ 0.18
SDF4-205ENST00000465727 TMEM70Q9BUB7 260 aa16.16■□□□□ 0.18
SDF4-205ENST00000465727 CFIP05156 583 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 CEACAM8P31997 349 aaPredicted RBP16.15■□□□□ 0.18
SDF4-205ENST00000465727 ZNF134P52741 427 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 MZT1Q08AG7 82 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 Q6ZVH6 145 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 ZNF596Q8TC21 504 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 ADTRPQ96IZ2 230 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 ZPBPQ9BS86 351 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 IDI2-AS1Q9NZ38 188 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 C21orf140B9A014 251 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 CA1P00915 261 aaPredicted RBP16.15■□□□□ 0.18
SDF4-205ENST00000465727 COL8A2P25067 703 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 NUP35Q8NFH5 326 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 PLPPR2Q96GM1 343 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 RAB9BQ9NP90 201 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 OR51B2Q9Y5P1 312 aa16.15■□□□□ 0.18
SDF4-205ENST00000465727 TIMM8AO60220 97 aaPredicted RBP16.14■□□□□ 0.17
SDF4-205ENST00000465727 IGHV1-2P23083 117 aa16.14■□□□□ 0.17
SDF4-205ENST00000465727 PRCDQ00LT1 54 aa16.14■□□□□ 0.17
SDF4-205ENST00000465727 RNASEKQ6P5S7 137 aaKnown RBP16.14■□□□□ 0.17
SDF4-205ENST00000465727 FAM168AQ92567 244 aa16.14■□□□□ 0.17
SDF4-205ENST00000465727 DUSP13Q9UII6 198 aa16.14■□□□□ 0.17
SDF4-205ENST00000465727 KLF13Q9Y2Y9 288 aaPredicted RBP16.14■□□□□ 0.17
SDF4-205ENST00000465727 IGKV1OR2-108A0A075B7D4 117 aa16.14■□□□□ 0.17
SDF4-205ENST00000465727 REG1BP48304 166 aa16.14■□□□□ 0.17
SDF4-205ENST00000465727 VAMP3Q15836 100 aa16.14■□□□□ 0.17
SDF4-205ENST00000465727 LRRC29Q8WV35 223 aa16.14■□□□□ 0.17
SDF4-205ENST00000465727 ZNF355PQ9NSJ1 428 aa16.14■□□□□ 0.17
SDF4-205ENST00000465727 KLRC4-KLRK1H3BQV0 150 aa16.13■□□□□ 0.17
SDF4-205ENST00000465727 HIST1H1EP10412 219 aaKnown RBP16.13■□□□□ 0.17
SDF4-205ENST00000465727 MEOX1P50221 254 aa16.13■□□□□ 0.17
SDF4-205ENST00000465727 C2orf83Q53S99 150 aa16.13■□□□□ 0.17
SDF4-205ENST00000465727 SSBP3Q9BWW4 388 aaPredicted RBP16.13■□□□□ 0.17
SDF4-205ENST00000465727 J3QR06 171 aa16.12■□□□□ 0.17
SDF4-205ENST00000465727 UBE2L3P68036 154 aaKnown RBP16.12■□□□□ 0.17
SDF4-205ENST00000465727 GDF5OSQ5U4N7 250 aa16.12■□□□□ 0.17
SDF4-205ENST00000465727 VWA1Q6PCB0 445 aa16.12■□□□□ 0.17
SDF4-205ENST00000465727 SNRNP40Q96DI7 357 aaKnown RBP16.12■□□□□ 0.17
SDF4-205ENST00000465727 LOXL4Q96JB6 756 aa16.12■□□□□ 0.17
SDF4-205ENST00000465727 AMMECR1Q9Y4X0 333 aaPredicted RBP16.12■□□□□ 0.17
SDF4-205ENST00000465727 RPL8P62917 257 aaKnown RBP16.12■□□□□ 0.17
SDF4-205ENST00000465727 IGKV3-15P01624 115 aa16.11■□□□□ 0.17
SDF4-205ENST00000465727 NUDT10Q8NFP7 164 aa16.11■□□□□ 0.17
SDF4-205ENST00000465727 OR1L8Q8NGR8 309 aa16.11■□□□□ 0.17
SDF4-205ENST00000465727 SMIM12Q96EX1 92 aa16.11■□□□□ 0.17
SDF4-205ENST00000465727 NUDT11Q96G61 164 aa16.11■□□□□ 0.17
SDF4-205ENST00000465727 HINT2Q9BX68 163 aa16.11■□□□□ 0.17
SDF4-205ENST00000465727 NCOR1P1Q9H4R4 102 aa16.11■□□□□ 0.17
SDF4-205ENST00000465727 CALYQ9NYX4 217 aa16.11■□□□□ 0.17
SDF4-205ENST00000465727 IGKV1D-17A0A075B6S4 117 aa16.1■□□□□ 0.17
SDF4-205ENST00000465727 OR4C46A6NHA9 309 aa16.1■□□□□ 0.17
SDF4-205ENST00000465727 CHCHD1Q96BP2 118 aaKnown RBP16.1■□□□□ 0.17
SDF4-205ENST00000465727 FAM167A-AS1Q96KT0 104 aa16.1■□□□□ 0.17
SDF4-205ENST00000465727 ZNF714Q96N38 554 aa16.1■□□□□ 0.17
SDF4-205ENST00000465727 FAM186AA6NE01 2351 aa16.1■□□□□ 0.17
SDF4-205ENST00000465727 A0A1B0GXF2 115 aa16.1■□□□□ 0.17
SDF4-205ENST00000465727 SRRM5B3KS81 715 aa16.1■□□□□ 0.17
SDF4-205ENST00000465727 LYZL6O75951 148 aa16.1■□□□□ 0.17
SDF4-205ENST00000465727 CER1O95813 267 aa16.1■□□□□ 0.17
SDF4-205ENST00000465727 SAA2P0DJI9 122 aaPredicted RBP16.1■□□□□ 0.17
SDF4-205ENST00000465727 C1orf229Q6ZS94 237 aaPredicted RBP16.1■□□□□ 0.17
SDF4-205ENST00000465727 NHLRC2Q8NBF2 726 aa16.1■□□□□ 0.17
SDF4-205ENST00000465727 SLC25A2Q9BXI2 301 aa16.1■□□□□ 0.17
SDF4-205ENST00000465727 CLCF1Q9UBD9 225 aa16.1■□□□□ 0.17
SDF4-205ENST00000465727 PSMB11A5LHX3 300 aa16.09■□□□□ 0.17
SDF4-205ENST00000465727 HIGD1CA8MV81 97 aa16.09■□□□□ 0.17
SDF4-205ENST00000465727 PEX7O00628 323 aa16.09■□□□□ 0.17
SDF4-205ENST00000465727 GATA2P23769 480 aaPredicted RBP16.09■□□□□ 0.17
SDF4-205ENST00000465727 C12orf54Q6X4T0 127 aa16.09■□□□□ 0.17
SDF4-205ENST00000465727 LINC00696Q6ZRV3 163 aa16.09■□□□□ 0.17
SDF4-205ENST00000465727 SMIM15Q7Z3B0 74 aa16.09■□□□□ 0.17
SDF4-205ENST00000465727 GCSAMQ8N6F7 178 aa16.09■□□□□ 0.17
SDF4-205ENST00000465727 CACNG8Q8WXS5 425 aa16.09■□□□□ 0.17
SDF4-205ENST00000465727 MPV17L2Q567V2 206 aa16.09■□□□□ 0.17
SDF4-205ENST00000465727 DEFB125Q8N687 156 aa16.09■□□□□ 0.17
SDF4-205ENST00000465727 FAM122AQ96E09 287 aa16.09■□□□□ 0.17
SDF4-205ENST00000465727 SOX21Q9Y651 276 aaPredicted RBP16.09■□□□□ 0.17
SDF4-205ENST00000465727 UPK2O00526 184 aa16.08■□□□□ 0.16
SDF4-205ENST00000465727 TAX1BP3O14907 124 aa16.08■□□□□ 0.16
SDF4-205ENST00000465727 TOX4O94842 621 aa16.08■□□□□ 0.16
SDF4-205ENST00000465727 HOXC12P31275 282 aa16.08■□□□□ 0.16
SDF4-205ENST00000465727 CFHR2P36980 270 aa16.08■□□□□ 0.16
SDF4-205ENST00000465727 CD69Q07108 199 aa16.08■□□□□ 0.16
SDF4-205ENST00000465727 CT45A1Q5HYN5 189 aa16.08■□□□□ 0.16
SDF4-205ENST00000465727 Q6ZT83 130 aa16.08■□□□□ 0.16
SDF4-205ENST00000465727 MOB3BQ86TA1 216 aa16.08■□□□□ 0.16
SDF4-205ENST00000465727 CT45A3Q8NHU0 189 aa16.08■□□□□ 0.16
SDF4-205ENST00000465727 SIT1Q9Y3P8 196 aa16.08■□□□□ 0.16
SDF4-205ENST00000465727 TRGV5A0A0B4J1U4 118 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 IGHV3-13P01766 116 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 IGHV3-7P01780 117 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 HLA-DRB1P01911 266 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 CGB3P0DN86 165 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 CGB7P0DN87 165 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 FAM120AOSQ5T036 256 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 MBNL2Q5VZF2 373 aaKnown RBP16.07■□□□□ 0.16
SDF4-205ENST00000465727 SLC25A34Q6PIV7 304 aa16.07■□□□□ 0.16
SDF4-205ENST00000465727 SPATA12Q7Z6I5 190 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms