RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 ARRDC5A6NEK1 342 aa2.54□□□□□ -2
SNX4-202ENST00000465505 BBIP1A8MTZ0 92 aa2.54□□□□□ -2
SNX4-202ENST00000465505 SLC17A2O00624 439 aa2.54□□□□□ -2
SNX4-202ENST00000465505 ISLRO14498 428 aa2.54□□□□□ -2
SNX4-202ENST00000465505 SOCS1O15524 211 aa2.54□□□□□ -2
SNX4-202ENST00000465505 HYPMO75409 117 aa2.54□□□□□ -2
SNX4-202ENST00000465505 SIX6O95475 246 aa2.54□□□□□ -2
SNX4-202ENST00000465505 NAPSAO96009 420 aa2.54□□□□□ -2
SNX4-202ENST00000465505 CA2P00918 260 aa2.54□□□□□ -2
SNX4-202ENST00000465505 HRASP01112 189 aa2.54□□□□□ -2
SNX4-202ENST00000465505 IGKV5-2P06315 115 aa2.54□□□□□ -2
SNX4-202ENST00000465505 MMP7P09237 267 aaPredicted RBP2.54□□□□□ -2
SNX4-202ENST00000465505 HOXB7P09629 217 aa2.54□□□□□ -2
SNX4-202ENST00000465505 H2AFZP0C0S5 128 aa2.54□□□□□ -2
SNX4-202ENST00000465505 TRGC1P0CF51 173 aa2.54□□□□□ -2
SNX4-202ENST00000465505 PGA5P0DJD9 388 aa2.54□□□□□ -2
SNX4-202ENST00000465505 IFITM1P13164 125 aa2.54□□□□□ -2
SNX4-202ENST00000465505 NFYAP23511 347 aaPredicted RBP2.54□□□□□ -2
SNX4-202ENST00000465505 PFN2P35080 140 aa2.54□□□□□ -2
SNX4-202ENST00000465505 ATP5G3P48201 142 aa2.54□□□□□ -2
SNX4-202ENST00000465505 RPL34P49207 117 aaKnown RBP2.54□□□□□ -2
SNX4-202ENST00000465505 ATP4BP51164 291 aa2.54□□□□□ -2
SNX4-202ENST00000465505 RND2P52198 227 aa2.54□□□□□ -2
SNX4-202ENST00000465505 SUB1P53999 127 aaKnown RBP eCLIP2.54□□□□□ -2
SNX4-202ENST00000465505 CRISP3P54108 245 aa2.54□□□□□ -2
SNX4-202ENST00000465505 ATP5G2Q06055 141 aa2.54□□□□□ -2
SNX4-202ENST00000465505 PRDX1Q06830 199 aaKnown RBP2.54□□□□□ -2
SNX4-202ENST00000465505 ZNF345Q14585 488 aa2.54□□□□□ -2
SNX4-202ENST00000465505 OR7A5Q15622 319 aa2.54□□□□□ -2
SNX4-202ENST00000465505 MS4A13Q5J8X5 152 aa2.54□□□□□ -2
SNX4-202ENST00000465505 PAGE3Q5JUK9 113 aa2.54□□□□□ -2
SNX4-202ENST00000465505 LCN12Q6JVE5 192 aa2.54□□□□□ -2
SNX4-202ENST00000465505 ZNF880Q6PDB4 577 aa2.54□□□□□ -2
SNX4-202ENST00000465505 MORN3Q6PF18 240 aaPredicted RBP2.54□□□□□ -2
SNX4-202ENST00000465505 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
SNX4-202ENST00000465505 TMEM179BQ7Z7N9 219 aa2.54□□□□□ -2
SNX4-202ENST00000465505 PRR15Q8IV56 129 aa2.54□□□□□ -2
SNX4-202ENST00000465505 NPWQ8N729 165 aa2.54□□□□□ -2
SNX4-202ENST00000465505 OR2T33Q8NG76 320 aa2.54□□□□□ -2
SNX4-202ENST00000465505 OR10J6PQ8NGY7 276 aa2.54□□□□□ -2
SNX4-202ENST00000465505 OR10AC1Q8NH08 325 aa2.54□□□□□ -2
SNX4-202ENST00000465505 MAL2Q969L2 176 aa2.54□□□□□ -2
SNX4-202ENST00000465505 MRPL24Q96A35 216 aaKnown RBP2.54□□□□□ -2
SNX4-202ENST00000465505 EEF1AKMT3Q96AZ1 226 aa2.54□□□□□ -2
SNX4-202ENST00000465505 LINC00526Q96FQ7 95 aa2.54□□□□□ -2
SNX4-202ENST00000465505 C2orf48Q96LS8 159 aa2.54□□□□□ -2
SNX4-202ENST00000465505 SOSTQ9BQB4 213 aa2.54□□□□□ -2
SNX4-202ENST00000465505 SMDT1Q9H4I9 107 aa2.54□□□□□ -2
SNX4-202ENST00000465505 DUSP21Q9H596 190 aa2.54□□□□□ -2
SNX4-202ENST00000465505 EDA2RQ9HAV5 297 aa2.54□□□□□ -2
SNX4-202ENST00000465505 KCNIP2Q9NS61 270 aa2.54□□□□□ -2
SNX4-202ENST00000465505 TMEM106BQ9NUM4 274 aa2.54□□□□□ -2
SNX4-202ENST00000465505 TMEM242Q9NWH2 141 aa2.54□□□□□ -2
SNX4-202ENST00000465505 NOP16Q9Y3C1 178 aaKnown RBP2.54□□□□□ -2
SNX4-202ENST00000465505 TPRKBQ9Y3C4 175 aa2.54□□□□□ -2
SNX4-202ENST00000465505 PYGO1Q9Y3Y4 419 aa2.54□□□□□ -2
SNX4-202ENST00000465505 NEUROG3Q9Y4Z2 214 aa2.54□□□□□ -2
SNX4-202ENST00000465505 GTF3C1Q12789 2109 aa2.54□□□□□ -2
SNX4-202ENST00000465505 AGRNO00468 2067 aa2.54□□□□□ -2
SNX4-202ENST00000465505 LRRK1Q38SD2 2015 aa2.54□□□□□ -2
SNX4-202ENST00000465505 AFDNP55196 1824 aaKnown RBP2.54□□□□□ -2
SNX4-202ENST00000465505 MON2Q7Z3U7 1717 aa2.54□□□□□ -2
SNX4-202ENST00000465505 CLTCQ00610 1675 aaKnown RBP2.53□□□□□ -2
SNX4-202ENST00000465505 PREX1Q8TCU6 1659 aa2.53□□□□□ -2
SNX4-202ENST00000465505 EIF2AK4Q9P2K8 1649 aaKnown RBP2.53□□□□□ -2
SNX4-202ENST00000465505 IGLV3-22A0A075B6J6 115 aa2.53□□□□□ -2
SNX4-202ENST00000465505 A0A087X0T9 212 aa2.53□□□□□ -2
SNX4-202ENST00000465505 TRAV8-6A0A0B4J262 113 aa2.53□□□□□ -2
SNX4-202ENST00000465505 TRBV7-6A0A0J9YX20 115 aa2.53□□□□□ -2
SNX4-202ENST00000465505 A0A1B0GXF2 115 aa2.53□□□□□ -2
SNX4-202ENST00000465505 C8orf87E5RJ46 101 aa2.53□□□□□ -2
SNX4-202ENST00000465505 F8W1H4 67 aa2.53□□□□□ -2
SNX4-202ENST00000465505 TMEM250H0YL14 139 aa2.53□□□□□ -2
SNX4-202ENST00000465505 M0R2P5 195 aa2.53□□□□□ -2
SNX4-202ENST00000465505 UQCRQO14949 82 aa2.53□□□□□ -2
SNX4-202ENST00000465505 TNFSF12O43508 249 aa2.53□□□□□ -2
SNX4-202ENST00000465505 KLF7O75840 302 aaPredicted RBP2.53□□□□□ -2
SNX4-202ENST00000465505 UBL3O95164 117 aa2.53□□□□□ -2
SNX4-202ENST00000465505 P01737 135 aa2.53□□□□□ -2
SNX4-202ENST00000465505 EIF4EP06730 217 aaKnown RBP2.53□□□□□ -2
SNX4-202ENST00000465505 LINC00869P0C866 280 aa2.53□□□□□ -2
SNX4-202ENST00000465505 CRYGAP11844 174 aa2.53□□□□□ -2
SNX4-202ENST00000465505 CCL1P22362 96 aa2.53□□□□□ -2
SNX4-202ENST00000465505 FKBP2P26885 142 aaKnown RBP2.53□□□□□ -2
SNX4-202ENST00000465505 OPRM1P35372 400 aa2.53□□□□□ -2
SNX4-202ENST00000465505 PPP1CCP36873 323 aaKnown RBP2.53□□□□□ -2
SNX4-202ENST00000465505 SRP14P37108 136 aaKnown RBP2.53□□□□□ -2
SNX4-202ENST00000465505 RPS10P46783 165 aaKnown RBP2.53□□□□□ -2
SNX4-202ENST00000465505 FOXA3P55318 350 aaPredicted RBP2.53□□□□□ -2
SNX4-202ENST00000465505 DSCR10P59022 87 aa2.53□□□□□ -2
SNX4-202ENST00000465505 RPS11P62280 158 aaKnown RBP eCLIP2.53□□□□□ -2
SNX4-202ENST00000465505 HERVK_113P63121 156 aa2.53□□□□□ -2
SNX4-202ENST00000465505 SEC11AP67812 179 aa2.53□□□□□ -2
SNX4-202ENST00000465505 DAZ2Q13117 558 aaKnown RBP2.53□□□□□ -2
SNX4-202ENST00000465505 EIF3IQ13347 325 aaKnown RBP2.53□□□□□ -2
SNX4-202ENST00000465505 HES1Q14469 280 aa2.53□□□□□ -2
SNX4-202ENST00000465505 TMEM187Q14656 261 aa2.53□□□□□ -2
SNX4-202ENST00000465505 LRRC37A5PQ49AS3 106 aa2.53□□□□□ -2
SNX4-202ENST00000465505 PHLDA2Q53GA4 152 aa2.53□□□□□ -2
SNX4-202ENST00000465505 SPRNQ5BIV9 151 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms