RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 TRAV5A0A0B4J249 113 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 DHRS12A0PJE2 317 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 A6NED7 52 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 F8W036 122 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 CYB5BO43169 146 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 MPC1LP0DKB6 136 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 LGALS3P17931 250 aaKnown RBP2.65□□□□□ -1.99
PTCD3-205ENST00000464541 S100PP25815 95 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 LPAR6P43657 344 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 GABRA2P47869 451 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 FXYD7P58549 80 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 PSG9Q00887 426 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 RTL8BQ17RB0 113 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 MRPL51Q4U2R6 128 aaKnown RBP2.65□□□□□ -1.99
PTCD3-205ENST00000464541 BCL2L15Q5TBC7 163 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 FKBP1CQ5VVH2 108 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 SSX8Q7RTT4 187 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 TRAPPC6BQ86SZ2 158 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 OR8I2Q8N0Y5 310 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 FNDC9Q8TBE3 224 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 ZCCHC13Q8WW36 166 aaKnown RBP2.65□□□□□ -1.99
PTCD3-205ENST00000464541 H1FXQ92522 213 aaKnown RBP2.65□□□□□ -1.99
PTCD3-205ENST00000464541 TMEM203Q969S6 136 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 TUBA4BQ9H853 241 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 ZNF230Q9UIE0 474 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-205ENST00000464541 PCTPQ9UKL6 214 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 KLK5Q9Y337 293 aaPredicted RBP2.65□□□□□ -1.99
PTCD3-205ENST00000464541 MED31Q9Y3C7 131 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 SMARCA2P51531 1590 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 CCDC171Q6TFL3 1326 aa2.65□□□□□ -1.99
PTCD3-205ENST00000464541 RFX7Q2KHR2 1363 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 MED23Q9ULK4 1368 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 TRBV24-1A0A075B6N3 115 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 SLC25A20O43772 301 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 SH2D1AO60880 128 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 GGCTO75223 188 aaKnown RBP2.64□□□□□ -1.99
PTCD3-205ENST00000464541 C1QCP02747 245 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 SLC25A16P16260 332 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 RPL7P18124 248 aaKnown RBP2.64□□□□□ -1.99
PTCD3-205ENST00000464541 NFYBP25208 207 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 SRP14P37108 136 aaKnown RBP2.64□□□□□ -1.99
PTCD3-205ENST00000464541 TSPEAR-AS2P59090 65 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 YPEL3P61236 119 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-205ENST00000464541 PLCXD2Q0VAA5 305 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 OR8G1Q15617 311 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 RRN3P1Q2M238 152 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 MORN2Q502X0 79 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 AADACL3Q5VUY0 350 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 LCA10Q71F78 164 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 LYZL2Q7Z4W2 148 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 KTN1-AS1Q86SY8 53 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 TCTE3Q8IZS6 198 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 ZFAND2AQ8N6M9 145 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 ZFP62Q8NB50 900 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-205ENST00000464541 BPIFB6Q8NFQ5 453 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 OR51T1Q8NGJ9 327 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 PPTC7Q8NI37 304 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 C2orf88Q9BSF0 95 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 OR2H1Q9GZK4 316 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 TCEAL2Q9H3H9 227 aaPredicted RBP2.64□□□□□ -1.99
PTCD3-205ENST00000464541 CACYBPQ9HB71 228 aaKnown RBP2.64□□□□□ -1.99
PTCD3-205ENST00000464541 SLC39A9Q9NUM3 307 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 IL36BQ9NZH7 164 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 CALML5Q9NZT1 146 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 MCTS1Q9ULC4 181 aaKnown RBP2.64□□□□□ -1.99
PTCD3-205ENST00000464541 BCL9O00512 1426 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 HECW2Q9P2P5 1572 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 NEO1Q92859 1461 aa2.64□□□□□ -1.99
PTCD3-205ENST00000464541 A0A087WUU8 490 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 TLCD2A6NGC4 264 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 FAM25AB3EWG3 89 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 FAM25CB3EWG5 89 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 FAM25GB3EWG6 89 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 J3QR89 54 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 M0R2Z0 102 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 IGLV6-57P01721 117 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 C1QAP02745 245 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 IGLV7-43P04211 117 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 SCTP09683 121 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 INAFM2P0DMQ5 153 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 IGHV3-30-3P0DP02 117 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 EVI2AP22794 236 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 RPS3P23396 243 aaKnown RBP eCLIP2.63□□□□□ -1.99
PTCD3-205ENST00000464541 S100A11P31949 105 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 NDUFA6P56556 154 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 KRTAP12-3P60328 96 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 EIF5AP63241 154 aaKnown RBP2.63□□□□□ -1.99
PTCD3-205ENST00000464541 EIF3IQ13347 325 aaKnown RBP2.63□□□□□ -1.99
PTCD3-205ENST00000464541 SPANXN3Q5MJ09 141 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 C10orf91Q5T1B1 145 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 RASL11AQ6T310 242 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 RPS4Y2Q8TD47 263 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 BORCS8Q96FH0 119 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 YPEL2Q96QA6 119 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 SLC25A21Q9BQT8 299 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-205ENST00000464541 YIPF3Q9GZM5 350 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 AICDAQ9GZX7 198 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 POPDC3Q9HBV1 291 aa2.63□□□□□ -1.99
PTCD3-205ENST00000464541 TRAPPC2LQ9UL33 140 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms