RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 HIST1H1AQ02539 215 aaPredicted RBP2.41□□□□□ -2.02
ITGB1-208ENST00000464001 PLCXD2Q0VAA5 305 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 WHAMMP3Q1A5X7 153 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 LYRM7Q5U5X0 104 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 FAM104BQ5XKR9 115 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 RASL11AQ6T310 242 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 LCA10Q71F78 164 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 SPATA12Q7Z6I5 190 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 LHFPL1Q86WI0 220 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 TMEM229BQ8NBD8 167 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 OR52R1Q8NGF1 315 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 OR5C1Q8NGR4 320 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 RPS4Y2Q8TD47 263 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 SLC25A46Q96AG3 418 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 BORCS8Q96FH0 119 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 SMIM3Q9BZL3 60 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 LINC00574Q9H8X3 128 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 ZNF355PQ9NSJ1 428 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 SPANXCQ9NY87 97 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 HIGD1AQ9Y241 93 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 LINC00588Q9Y4M8 146 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 OVOS2A0A0G2JMS6 1433 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 ATG2AQ2TAZ0 1938 aa2.4□□□□□ -2.02
ITGB1-208ENST00000464001 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
ITGB1-208ENST00000464001 WDR90Q96KV7 1748 aa2.4□□□□□ -2.02
ITGB1-208ENST00000464001 TRPM3Q9HCF6 1732 aaPredicted RBP2.4□□□□□ -2.02
ITGB1-208ENST00000464001 CCNB3Q8WWL7 1395 aa2.4□□□□□ -2.02
ITGB1-208ENST00000464001 MED23Q9ULK4 1368 aa2.4□□□□□ -2.02
ITGB1-208ENST00000464001 ZFC3H1O60293 1989 aaKnown RBP2.4□□□□□ -2.02
ITGB1-208ENST00000464001 IGKV2D-24A0A075B6R9 120 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 A0A087WUU8 490 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 A6NED7 52 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 ZNF860A6NHJ4 632 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 C1orf196B1AJZ1 125 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 BUB1B-PAK6H3BSN5 160 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 GABARAPH6UMI1 98 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 OVOL1O14753 267 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 RBFOX2O43251 390 aaKnown RBP eCLIP2.4□□□□□ -2.03
ITGB1-208ENST00000464001 OR2H2O95918 312 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 BCL2P10415 239 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 IL1RNP18510 177 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 HIST1H2BOP23527 126 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 HIST1H2BBP33778 126 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 CCR2P41597 374 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 HIST1H2BDP58876 126 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 HIST1H2BCP62807 126 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 PSG9Q00887 426 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 NEDD8Q15843 81 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 HIST2H2BEQ16778 126 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 MRPL51Q4U2R6 128 aaKnown RBP2.4□□□□□ -2.03
ITGB1-208ENST00000464001 MORN2Q502X0 79 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.4□□□□□ -2.03
ITGB1-208ENST00000464001 AADACL3Q5VUY0 350 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 Q5XG85 94 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 SLC25A34Q6PIV7 304 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 IDO2Q6ZQW0 420 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 OR8I2Q8N0Y5 310 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 ZFAND2AQ8N6M9 145 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 OR5A1Q8NGJ0 315 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 OR51T1Q8NGJ9 327 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 FNDC9Q8TBE3 224 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 C1orf54Q8WWF1 131 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 HIST1H2BHQ93079 126 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 RMI2Q96E14 147 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 C2orf50Q96LR7 162 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 HIST1H2BNQ99877 126 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 HIST1H2BMQ99879 126 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 GGACTQ9BVM4 153 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 NKX6-2Q9C056 277 aaPredicted RBP2.4□□□□□ -2.03
ITGB1-208ENST00000464001 IMUPQ9GZP8 106 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 AICDAQ9GZX7 198 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 IL36BQ9NZH7 164 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 FUT9Q9Y231 359 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 MYH13Q9UKX3 1938 aa2.4□□□□□ -2.03
ITGB1-208ENST00000464001 EIF4G3O43432 1585 aaKnown RBP2.4□□□□□ -2.03
ITGB1-208ENST00000464001 CAMSAP2Q08AD1 1489 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 RPRD2Q5VT52 1461 aaKnown RBP2.39□□□□□ -2.03
ITGB1-208ENST00000464001 IGKV2-28A0A075B6P5 120 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 J3QQQ9 107 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 TAX1BP3O14907 124 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 IGKV2D-28P01615 120 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 IGHV1-46P01743 117 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 TRGC2P03986 189 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 PTHLHP12272 177 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 KDELR1P24390 212 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 NFYBP25208 207 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 ATP6V0CP27449 155 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 TSPEAR-AS2P59090 65 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 CCL20P78556 96 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 Q6ZR03 302 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 RPP25LQ8N5L8 163 aaKnown RBP2.39□□□□□ -2.03
ITGB1-208ENST00000464001 OR4C16Q8NGL9 310 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 OR13C4Q8NGS5 318 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 SLC25A21Q9BQT8 299 aaPredicted RBP2.39□□□□□ -2.03
ITGB1-208ENST00000464001 NDFIP1Q9BT67 221 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 DERL1Q9BUN8 251 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 RTL8AQ9BWD3 113 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 C1QTNF6Q9BXI9 259 aa2.39□□□□□ -2.03
ITGB1-208ENST00000464001 TTTY13Q9BZ97 58 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms