RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 CXorf1O96002 111 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 AREGP15514 252 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 HTR1DP28221 377 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 RPL27AP46776 148 aaKnown RBP8.14□□□□□ -1.11
MSH5-211ENST00000463144 EFNA4P52798 201 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 TNXAQ16473 311 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 ZNF674Q2M3X9 581 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 FBLN7Q53RD9 439 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 PVRIGQ6DKI7 326 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 ZNF343Q6P1L6 599 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 PPP1R27Q86WC6 154 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 CFHR4Q92496 578 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 ACY3Q96HD9 319 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 SMIM7Q9BQ49 75 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 FBXL15Q9H469 300 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 DPM3Q9P2X0 92 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 HILPDAQ9Y5L2 63 aa8.14□□□□□ -1.11
MSH5-211ENST00000463144 A0A1W2PRD5 423 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 A0A1W2PRF3 423 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 A0A1W2PRM7 423 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 TEX22C9J3V5 150 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 IGHV2-5P01817 119 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 APELAP0DMC3 54 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 RAB5AP20339 215 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 COMPP49747 757 aaPredicted RBP8.13□□□□□ -1.11
MSH5-211ENST00000463144 RHOBP62745 196 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 PAX2Q02962 417 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 PNRC1Q12796 327 aaPredicted RBP8.13□□□□□ -1.11
MSH5-211ENST00000463144 HABP2Q14520 560 aaPredicted RBP8.13□□□□□ -1.11
MSH5-211ENST00000463144 RNF212Q495C1 297 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 CYP2G1PQ6ZSU1 146 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 MIR17HGQ75NE6 70 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 ZFP82Q8N141 532 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 OR51G1Q8NGK1 321 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 RNASEH2CQ8TDP1 164 aaKnown RBP8.13□□□□□ -1.11
MSH5-211ENST00000463144 SLC35E1Q96K37 410 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 IGKV1D-37A0A075B6S9 117 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 B4DEV8 164 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 OVOL3O00110 214 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 ACTL6BO94805 426 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 VENTXO95231 258 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 GCHFRP30047 84 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 SUB1P53999 127 aaKnown RBP eCLIP8.13□□□□□ -1.112e-7■■□□□ 14.2
MSH5-211ENST00000463144 GNB1P62873 340 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 KIAA0141Q14154 515 aaPredicted RBP8.13□□□□□ -1.11
MSH5-211ENST00000463144 TMEM241Q24JQ0 296 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 FAM78BQ5VT40 261 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 DYNAPQ8N1N2 210 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 NPIPB3Q92617 1050 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 NAT8Q9UHE5 227 aa8.13□□□□□ -1.11
MSH5-211ENST00000463144 YTHDF2Q9Y5A9 579 aaKnown RBP8.13□□□□□ -1.11
MSH5-211ENST00000463144 EPG5Q9HCE0 2579 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 PSMB11A5LHX3 300 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 CXCL1P09341 107 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 CD24P25063 80 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 LGALS4P56470 323 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 RPL23P62829 140 aaKnown RBP8.12□□□□□ -1.11
MSH5-211ENST00000463144 ELOBQ15370 118 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 CST9LP1Q5W188 147 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 C1orf122Q6ZSJ8 110 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 VMO1Q7Z5L0 202 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 C2CD4CQ8TF44 421 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 Q8WTZ3 238 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 TMEM37Q8WXS4 190 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 RNF5Q99942 180 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 CRYGCP07315 174 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 LMO4P61968 165 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 LCN2P80188 198 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 KIR3DL3Q8N743 410 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 ZNF114Q8NC26 417 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 ZNF503Q96F45 646 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 SSX3Q99909 188 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 SIRPDQ9H106 197 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 FUT9Q9Y231 359 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 DMRT1Q9Y5R6 373 aa8.12□□□□□ -1.11
MSH5-211ENST00000463144 OR5G3P0C626 314 aa8.11□□□□□ -1.11
MSH5-211ENST00000463144 RNF224P0DH78 156 aa8.11□□□□□ -1.11
MSH5-211ENST00000463144 HOXB4P17483 251 aaPredicted RBP8.11□□□□□ -1.11
MSH5-211ENST00000463144 ZNF90Q03938 601 aa8.11□□□□□ -1.11
MSH5-211ENST00000463144 ADIRFQ15847 76 aa8.11□□□□□ -1.11
MSH5-211ENST00000463144 MORN5Q5VZ52 161 aa8.11□□□□□ -1.11
MSH5-211ENST00000463144 THAP8Q8NA92 274 aa8.11□□□□□ -1.11
MSH5-211ENST00000463144 MALSU1Q96EH3 234 aa8.11□□□□□ -1.11
MSH5-211ENST00000463144 SLC25A33Q9BSK2 321 aa8.11□□□□□ -1.11
MSH5-211ENST00000463144 DERL1Q9BUN8 251 aa8.11□□□□□ -1.11
MSH5-211ENST00000463144 BPESC1Q9GZL8 116 aa8.11□□□□□ -1.11
MSH5-211ENST00000463144 URGCP-MRPS24S4R325 110 aa8.11□□□□□ -1.11
MSH5-211ENST00000463144 TGIF2-C20orf24A0A0A6YYL0 155 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 CXorf65A6NEN9 183 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 PDE6DO43924 150 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 NDUFB4O95168 129 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 CTRB1P17538 263 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 CEACAM3P40198 252 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 CTRB2Q6GPI1 263 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 SRSF12Q8WXF0 261 aaKnown RBP8.1□□□□□ -1.11
MSH5-211ENST00000463144 EAF1Q96JC9 268 aaPredicted RBP8.1□□□□□ -1.11
MSH5-211ENST00000463144 TMEM242Q9NWH2 141 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 SVEP1Q4LDE5 3571 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 CSMD1Q96PZ7 3565 aa8.1□□□□□ -1.11
MSH5-211ENST00000463144 TCRBV4S1A1TA0A5B7 111 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms