RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SPANXN5Q5MJ07 72 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 OR1N2Q8NGR9 330 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 C18orf32Q8TCD1 76 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 WFDC12Q8WWY7 111 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 NEUROG1Q92886 237 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 SPTSSAQ969W0 71 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 AP1S3Q96PC3 154 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 PPIAL4EA0A075B759 164 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 PPIAL4CA0A0B4J2A2 164 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 PPIAL4DF5H284 164 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 APCSP02743 223 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 STAG3L3P0CL85 134 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 PPIAL4FP0DN26 164 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 Q6ZPA2 131 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 Q6ZRM9 215 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 TMEM54Q969K7 222 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 TMEM191AQ9H0A3 160 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 SAP30LQ9HAJ7 183 aa9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 LIN7CQ9NUP9 197 aaKnown RBP9.48□□□□□ -0.89
TRAPPC3-205ENST00000462715 IGKV1D-13A0A0B4J2D9 117 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 C7orf71A4D174 169 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 A6NDN8 102 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 PMS2P5A8MQ11 134 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 J3QW42 95 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 LYZL6O75951 148 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 IGKV1-13P0DP09 117 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 IGHV1-2P23083 117 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 GRNP28799 593 aaKnown RBP9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 WFDC8Q8IUA0 241 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 C1orf162Q8NEQ5 155 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 DPF1Q92782 380 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 SCRT2Q9NQ03 307 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 FREM1Q5H8C1 2179 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 PSMB11A5LHX3 300 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 M0R2Z0 102 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 TNFSF12O43508 249 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 SMPD2O60906 423 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 NXPH3O95157 252 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 STAG3L2P0CL84 134 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 IGFBP2P18065 325 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 C5orf64Q2M2E5 130 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 EBLN2Q6P2I7 272 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 WDR82Q6UXN9 313 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 SSX8Q7RTT4 187 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 OR8I2Q8N0Y5 310 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 DERL1Q9BUN8 251 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 OR2W1Q9Y3N9 320 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 HCFC1P51610 2035 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 DOPEY2Q9Y3R5 2298 aa9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 ANKHD1Q8IWZ3 2542 aaKnown RBP9.47□□□□□ -0.89
TRAPPC3-205ENST00000462715 A0A1W2PPV4 95 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 SMIM27A0A1W2PRY6 76 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 OR4C46A6NHA9 309 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 C19orf84I3L1E1 186 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 J3QR89 54 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 ISLRO14498 428 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 OR2J3O76001 311 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 CRYAAP02489 173 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 RELBQ01201 579 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 PSG7Q13046 419 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 CEACAM16Q2WEN9 425 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 ZNF718Q3SXZ3 478 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 C10orf128Q5T292 105 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 CHRDL1Q9BU40 450 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 PTPN13Q12923 2485 aa9.46□□□□□ -0.89
TRAPPC3-205ENST00000462715 IZUMO1RA6ND01 250 aa9.46□□□□□ -0.9
TRAPPC3-205ENST00000462715 HMGB3O15347 200 aaKnown RBP9.46□□□□□ -0.9
TRAPPC3-205ENST00000462715 SPRY1O43609 319 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC3-205ENST00000462715 ANGPTL7O43827 346 aa9.46□□□□□ -0.9
TRAPPC3-205ENST00000462715 OR5AL1P0C617 328 aa9.46□□□□□ -0.9
TRAPPC3-205ENST00000462715 PSG2P11465 335 aa9.46□□□□□ -0.9
TRAPPC3-205ENST00000462715 COX6B1P14854 86 aa9.46□□□□□ -0.9
TRAPPC3-205ENST00000462715 AZU1P20160 251 aa9.46□□□□□ -0.9
TRAPPC3-205ENST00000462715 GPR183P32249 361 aa9.46□□□□□ -0.9
TRAPPC3-205ENST00000462715 PIGYQ3MUY2 71 aa9.46□□□□□ -0.9
TRAPPC3-205ENST00000462715 Q56UQ5 140 aa9.46□□□□□ -0.9
TRAPPC3-205ENST00000462715 CLEC5AQ9NY25 188 aa9.46□□□□□ -0.9
TRAPPC3-205ENST00000462715 IGKV1-27A0A075B6S5 117 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 K7EN84 100 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 IGKV1-39P01597 117 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 IGKV1-5P01602 117 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 IGKV1D-39P04432 117 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 NTF3P20783 257 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 GABRA6Q16445 453 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 LCN12Q6JVE5 192 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 COLCA1Q6ZS62 124 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 ATOH7Q8N100 152 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 FAM222BQ8WU58 562 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 CHCHD1Q96BP2 118 aaKnown RBP9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 NPFFR1Q9GZQ6 430 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 NPVFQ9HCQ7 196 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 ICE1Q9Y2F5 2266 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 IGKV1-12A0A0C4DH73 117 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 M0R135 149 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 DHHO43323 396 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 GNG7O60262 68 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 IGKV1D-12P01611 117 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 PLP1P60201 277 aa9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 ARF1P84077 181 aaKnown RBP9.45□□□□□ -0.9
TRAPPC3-205ENST00000462715 HSD52Q0P140 79 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms