RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 K7EIM0 57 aa15.76■□□□□ 0.11
VARS-218ENST00000459667 HOXA1P49639 335 aaPredicted RBP15.76■□□□□ 0.11
VARS-218ENST00000459667 CD69Q07108 199 aa15.76■□□□□ 0.11
VARS-218ENST00000459667 ZNF846Q147U1 533 aa15.76■□□□□ 0.11
VARS-218ENST00000459667 Q6ZRM9 215 aa15.76■□□□□ 0.11
VARS-218ENST00000459667 SCARB1Q8WTV0 552 aa15.76■□□□□ 0.11
VARS-218ENST00000459667 GPR146Q96CH1 333 aa15.76■□□□□ 0.11
VARS-218ENST00000459667 MISP3Q96FF7 219 aa15.76■□□□□ 0.11
VARS-218ENST00000459667 PRR13Q9NZ81 148 aa15.76■□□□□ 0.11
VARS-218ENST00000459667 CACNG5Q9UF02 275 aa15.76■□□□□ 0.11
VARS-218ENST00000459667 DUXBA0A1W2PPF3 345 aa15.75■□□□□ 0.11
VARS-218ENST00000459667 OR2T8A6NH00 312 aa15.75■□□□□ 0.11
VARS-218ENST00000459667 C2orf70A6NJV1 201 aa15.75■□□□□ 0.11
VARS-218ENST00000459667 LYRM1O43325 122 aa15.75■□□□□ 0.11
VARS-218ENST00000459667 TGOLN2O43493 480 aa15.75■□□□□ 0.11
VARS-218ENST00000459667 SFT2D2O95562 160 aa15.75■□□□□ 0.11
VARS-218ENST00000459667 SULT1A3P0DMM9 295 aa15.75■□□□□ 0.11
VARS-218ENST00000459667 SULT1A4P0DMN0 295 aa15.75■□□□□ 0.11
VARS-218ENST00000459667 SNCAP37840 140 aa15.75■□□□□ 0.11
VARS-218ENST00000459667 SMAD5-AS1Q9Y6J3 95 aa15.75■□□□□ 0.11
VARS-218ENST00000459667 ZNF320A2RRD8 509 aa15.74■□□□□ 0.11
VARS-218ENST00000459667 INS-IGF2F8WCM5 200 aa15.74■□□□□ 0.11
VARS-218ENST00000459667 SUB1P53999 127 aaKnown RBP eCLIP15.74■□□□□ 0.11
VARS-218ENST00000459667 SPCS3P61009 180 aa15.74■□□□□ 0.11
VARS-218ENST00000459667 PPP1R1AQ13522 171 aa15.74■□□□□ 0.11
VARS-218ENST00000459667 LCN12Q6JVE5 192 aa15.74■□□□□ 0.11
VARS-218ENST00000459667 ADAMTSL5Q6ZMM2 481 aa15.74■□□□□ 0.11
VARS-218ENST00000459667 UBAC2Q8NBM4 344 aa15.74■□□□□ 0.11
VARS-218ENST00000459667 OR52E5Q8NH55 327 aa15.74■□□□□ 0.11
VARS-218ENST00000459667 DYNLRB2Q8TF09 96 aa15.74■□□□□ 0.11
VARS-218ENST00000459667 BSCL2Q96G97 398 aaPredicted RBP15.74■□□□□ 0.11
VARS-218ENST00000459667 ATP6V0BQ99437 205 aa15.74■□□□□ 0.11
VARS-218ENST00000459667 IGHV3-35A0A0C4DH35 117 aa15.73■□□□□ 0.11
VARS-218ENST00000459667 A8MWP6 167 aa15.73■□□□□ 0.11
VARS-218ENST00000459667 PLA2G10O15496 165 aa15.73■□□□□ 0.11
VARS-218ENST00000459667 FOLR2P14207 255 aa15.73■□□□□ 0.11
VARS-218ENST00000459667 EDN2P20800 178 aa15.73■□□□□ 0.11
VARS-218ENST00000459667 BTCP35070 178 aa15.73■□□□□ 0.11
VARS-218ENST00000459667 AARDQ4LEZ3 155 aa15.73■□□□□ 0.11
VARS-218ENST00000459667 Q56UQ5 140 aa15.73■□□□□ 0.11
VARS-218ENST00000459667 LYZL2Q7Z4W2 148 aa15.73■□□□□ 0.11
VARS-218ENST00000459667 OR2K2Q8NGT1 345 aa15.73■□□□□ 0.11
VARS-218ENST00000459667 TMEM213A2RRL7 107 aa15.72■□□□□ 0.11
VARS-218ENST00000459667 F8W735 103 aaPredicted RBP15.72■□□□□ 0.11
VARS-218ENST00000459667 I3L2K1 104 aa15.72■□□□□ 0.11
VARS-218ENST00000459667 MT-CO2P00403 227 aa15.72■□□□□ 0.11
VARS-218ENST00000459667 SMCO1Q147U7 214 aa15.72■□□□□ 0.11
VARS-218ENST00000459667 SPSB3Q6PJ21 355 aa15.72■□□□□ 0.11
VARS-218ENST00000459667 UNQ9165/PRO28630Q6UXU0 137 aa15.72■□□□□ 0.11
VARS-218ENST00000459667 LRTM2Q8N967 370 aa15.72■□□□□ 0.11
VARS-218ENST00000459667 PINX1Q96BK5 328 aaKnown RBP15.72■□□□□ 0.11
VARS-218ENST00000459667 ZNF436Q9C0F3 470 aaPredicted RBP15.72■□□□□ 0.11
VARS-218ENST00000459667 IZUMO1RA6ND01 250 aa15.71■□□□□ 0.11
VARS-218ENST00000459667 ANKRD55Q3KP44 614 aa15.71■□□□□ 0.11
VARS-218ENST00000459667 CD300EQ496F6 205 aaPredicted RBP15.71■□□□□ 0.11
VARS-218ENST00000459667 NMSQ5H8A3 153 aa15.71■□□□□ 0.11
VARS-218ENST00000459667 MZT2BQ6NZ67 158 aa15.71■□□□□ 0.11
VARS-218ENST00000459667 CACNG8Q8WXS5 425 aa15.71■□□□□ 0.11
VARS-218ENST00000459667 CHRDL1Q9BU40 450 aa15.71■□□□□ 0.11
VARS-218ENST00000459667 PALMDQ9NP74 551 aa15.71■□□□□ 0.11
VARS-218ENST00000459667 GAR1Q9NY12 217 aaKnown RBP15.71■□□□□ 0.11
VARS-218ENST00000459667 FLVCR2Q9UPI3 526 aa15.71■□□□□ 0.11
VARS-218ENST00000459667 A0A1B0GU03 582 aa15.7■□□□□ 0.1
VARS-218ENST00000459667 CEBPZOSA8MTT3 80 aa15.7■□□□□ 0.1
VARS-218ENST00000459667 RNASE2P10153 161 aaKnown RBP15.7■□□□□ 0.1
VARS-218ENST00000459667 CBLN1P23435 193 aa15.7■□□□□ 0.1
VARS-218ENST00000459667 MFAP4P55083 255 aa15.7■□□□□ 0.1
VARS-218ENST00000459667 C4orf46Q504U0 113 aa15.7■□□□□ 0.1
VARS-218ENST00000459667 COQ8AQ8NI60 647 aa15.7■□□□□ 0.1
VARS-218ENST00000459667 TECRQ9NZ01 308 aaKnown RBP15.7■□□□□ 0.1
VARS-218ENST00000459667 UFC1Q9Y3C8 167 aa15.7■□□□□ 0.1
VARS-218ENST00000459667 TMED3Q9Y3Q3 217 aa15.7■□□□□ 0.1
VARS-218ENST00000459667 C9orf170A2RU37 121 aa15.69■□□□□ 0.1
VARS-218ENST00000459667 CORTO00230 105 aa15.69■□□□□ 0.1
VARS-218ENST00000459667 IGHV3-48P01763 117 aa15.69■□□□□ 0.1
VARS-218ENST00000459667 OR4E1P0C645 316 aa15.69■□□□□ 0.1
VARS-218ENST00000459667 FCGR2BP31994 310 aaPredicted RBP15.69■□□□□ 0.1
VARS-218ENST00000459667 ADMP35318 185 aa15.69■□□□□ 0.1
VARS-218ENST00000459667 DEFB114Q30KQ6 69 aa15.69■□□□□ 0.1
VARS-218ENST00000459667 TM4SF20Q53R12 229 aa15.69■□□□□ 0.1
VARS-218ENST00000459667 OR1S1Q8NH92 325 aa15.69■□□□□ 0.1
VARS-218ENST00000459667 TMEM190Q8WZ59 177 aa15.69■□□□□ 0.1
VARS-218ENST00000459667 TXN2Q99757 166 aa15.69■□□□□ 0.1
VARS-218ENST00000459667 C20orf85Q9H1P6 137 aa15.69■□□□□ 0.1
VARS-218ENST00000459667 HEYLQ9NQ87 328 aaPredicted RBP15.69■□□□□ 0.1
VARS-218ENST00000459667 FAM240BA0A1B0GVZ2 78 aa15.68■□□□□ 0.1
VARS-218ENST00000459667 NDUFA4O00483 81 aa15.68■□□□□ 0.1
VARS-218ENST00000459667 NUPL2O15504 423 aaKnown RBP15.68■□□□□ 0.1
VARS-218ENST00000459667 UPK1BO75841 260 aa15.68■□□□□ 0.1
VARS-218ENST00000459667 NXPH3O95157 252 aa15.68■□□□□ 0.1
VARS-218ENST00000459667 ELLP55199 621 aaPredicted RBP15.68■□□□□ 0.1
VARS-218ENST00000459667 PVRIGQ6DKI7 326 aa15.68■□□□□ 0.1
VARS-218ENST00000459667 LYG2Q86SG7 212 aa15.68■□□□□ 0.1
VARS-218ENST00000459667 GTSCR1Q86UQ5 136 aa15.68■□□□□ 0.1
VARS-218ENST00000459667 Q8N1Y9 231 aa15.68■□□□□ 0.1
VARS-218ENST00000459667 UXS1Q8NBZ7 420 aa15.68■□□□□ 0.1
VARS-218ENST00000459667 HIPK2Q9H2X6 1198 aa15.68■□□□□ 0.1
VARS-218ENST00000459667 GNG7O60262 68 aa15.67■□□□□ 0.1
VARS-218ENST00000459667 TCRBP04435 133 aa15.67■□□□□ 0.1
VARS-218ENST00000459667 CTSGP08311 255 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms