RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PAX9P55771 341 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 TAS2R45P59539 299 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 RPL15P61313 204 aaKnown RBP4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 RHOBP62745 196 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 ATP5G2Q06055 141 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 CD69Q07108 199 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 FFAR4Q5NUL3 377 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 TMEM182Q6ZP80 229 aaPredicted RBP4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 SLC16A13Q7RTY0 426 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 TMEM144Q7Z5S9 345 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 IQCF2Q8IXL9 164 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 DYNAPQ8N1N2 210 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 TTC9CQ8N5M4 171 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 C5orf56Q8N8D9 126 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 Q8N9W7 124 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 ZNF114Q8NC26 417 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 NECAP1Q8NC96 275 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 BPIFCQ8NFQ6 507 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR5T1Q8NG75 326 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR1L4Q8NGR5 311 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 Q8WTZ3 238 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 C17orf50Q8WW18 174 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 TAF15Q92804 592 aaKnown RBP eCLIP4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 EEF1AKMT3Q96AZ1 226 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 RITA1Q96K30 269 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR4C12Q96R67 309 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 TXN2Q99757 166 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 WDR61Q9GZS3 305 aaKnown RBP4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 TNCP24821 2201 aa4.65□□□□□ -1.67
RNU1-88P-201ENST00000459274 ABCA1O95477 2261 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 ELOA3CA0A087WX78 387 aaPredicted RBP4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 A6NDX4 124 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 FAM223BA6NKX1 122 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 C15orf62A8K5M9 175 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 G3V3Q6 166 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 H3BUA1 57 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 FCN1O00602 326 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 RGS13O14921 159 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 HOXA3O43365 443 aaPredicted RBP4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 COX7A2P2O60397 106 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 AVPP01185 164 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 IGHV4-59P01825 116 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 TRGV3P03979 118 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR5G3P0C626 314 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 RNASE2P10153 161 aaKnown RBP4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 SPP1P10451 314 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 PF4V1P10720 104 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 M6PRP20645 277 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 LORP23490 312 aaPredicted RBP4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 ATP6V0CP27449 155 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 BMI1P35226 326 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 TAGLN2P37802 199 aaKnown RBP4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 SULT1A2P50226 295 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 B2MP61769 119 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 RELQ04864 619 aaPredicted RBP4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 WT1-ASQ06250 92 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 TMEM41BQ5BJD5 291 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 KLF17Q5JT82 389 aaPredicted RBP4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 C10orf55Q5SWW7 151 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 FAM223AQ8IWN6 122 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 COMMD1Q8N668 190 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 Q8N6K4 173 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR10G4Q8NGN3 311 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR10G9Q8NGN4 311 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR10G7Q8NGN6 311 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 FAM110DQ8TAY7 271 aaPredicted RBP4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 FAM213BQ8TBF2 198 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 VN1R17PQ8TDU5 208 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 USMG5Q96IX5 58 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 P2RX4Q99571 388 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 FAM103A1Q9BTL3 118 aaKnown RBP4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 NPCDR1Q9BY65 106 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 EIF5A2Q9GZV4 153 aaKnown RBP4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 GNB4Q9HAV0 340 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 TPSG1Q9NRR2 321 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 FBXL7Q9UJT9 491 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 NBEAQ8NFP9 2946 aa4.64□□□□□ -1.67
RNU1-88P-201ENST00000459274 PLXNB1O43157 2135 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 IGHV7-81A0A0B4J1V7 117 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 IGLC7A0M8Q6 106 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 AGPAT2O15120 278 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 ATP6V0E1O15342 81 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 TMEM50AO95807 157 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 IGHG2P01859 326 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 CRYGCP07315 174 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 RD3LP0DJH9 198 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 AREGP15514 252 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 CTRB1P17538 263 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 PAX6P26367 422 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR10J1P30954 320 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 RPL29P47914 159 aaKnown RBP4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 RAB9AP51151 201 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 RND2P52198 227 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 ELLP55199 621 aaPredicted RBP4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 TPPP2P59282 170 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 GAMTQ14353 236 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 PEA15Q15121 130 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 VWC2Q2TAL6 325 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 CLLU1Q5K131 121 aa4.63□□□□□ -1.67
RNU1-88P-201ENST00000459274 LDLRAD2Q5SZI1 272 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms