RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 SUPT4H1P63272 117 aaKnown RBP12.33□□□□□ -0.44
CD28-203ENST00000458610 Q6ZRM9 215 aa12.33□□□□□ -0.44
CD28-203ENST00000458610 OR2K2Q8NGT1 345 aa12.33□□□□□ -0.44
CD28-203ENST00000458610 SDHCQ99643 169 aaPredicted RBP12.33□□□□□ -0.44
CD28-203ENST00000458610 CCDC32Q9BV29 185 aa12.33□□□□□ -0.44
CD28-203ENST00000458610 HIPK2Q9H2X6 1198 aa12.33□□□□□ -0.44
CD28-203ENST00000458610 CEBPZOSA8MTT3 80 aa12.32□□□□□ -0.44
CD28-203ENST00000458610 TGOLN2O43493 480 aa12.32□□□□□ -0.44
CD28-203ENST00000458610 SFT2D2O95562 160 aa12.32□□□□□ -0.44
CD28-203ENST00000458610 CSN3P07498 182 aa12.32□□□□□ -0.44
CD28-203ENST00000458610 HTR2BP41595 481 aa12.32□□□□□ -0.44
CD28-203ENST00000458610 Q56UQ5 140 aa12.32□□□□□ -0.44
CD28-203ENST00000458610 SPINK9Q5DT21 86 aa12.32□□□□□ -0.44
CD28-203ENST00000458610 IL34Q6ZMJ4 242 aa12.32□□□□□ -0.44
CD28-203ENST00000458610 NOXA1Q86UR1 476 aa12.32□□□□□ -0.44
CD28-203ENST00000458610 HEYLQ9NQ87 328 aaPredicted RBP12.32□□□□□ -0.44
CD28-203ENST00000458610 A0A1B0GU03 582 aa12.31□□□□□ -0.44
CD28-203ENST00000458610 K7EIM0 57 aa12.31□□□□□ -0.44
CD28-203ENST00000458610 NUPL2O15504 423 aaKnown RBP12.31□□□□□ -0.44
CD28-203ENST00000458610 HLA-AP01891 365 aaKnown RBP12.31□□□□□ -0.44
CD28-203ENST00000458610 SPNP16150 400 aa12.31□□□□□ -0.44
CD28-203ENST00000458610 FCGR2BP31994 310 aaPredicted RBP12.31□□□□□ -0.44
CD28-203ENST00000458610 SMCO1Q147U7 214 aa12.31□□□□□ -0.44
CD28-203ENST00000458610 LCN12Q6JVE5 192 aa12.31□□□□□ -0.44
CD28-203ENST00000458610 LYZL2Q7Z4W2 148 aa12.31□□□□□ -0.44
CD28-203ENST00000458610 LRTM2Q8N967 370 aa12.31□□□□□ -0.44
CD28-203ENST00000458610 DUSP18Q8NEJ0 188 aa12.31□□□□□ -0.44
CD28-203ENST00000458610 DYNLRB2Q8TF09 96 aa12.31□□□□□ -0.44
CD28-203ENST00000458610 MARC2Q969Z3 335 aa12.31□□□□□ -0.44
CD28-203ENST00000458610 PINX1Q96BK5 328 aaKnown RBP12.31□□□□□ -0.44
CD28-203ENST00000458610 PRR25Q96S07 402 aa12.31□□□□□ -0.44
CD28-203ENST00000458610 TECRQ9NZ01 308 aaKnown RBP12.31□□□□□ -0.44
CD28-203ENST00000458610 UFC1Q9Y3C8 167 aa12.31□□□□□ -0.44
CD28-203ENST00000458610 OR2T8A6NH00 312 aa12.3□□□□□ -0.44
CD28-203ENST00000458610 I3L2K1 104 aa12.3□□□□□ -0.44
CD28-203ENST00000458610 SCGB2A1O75556 95 aa12.3□□□□□ -0.44
CD28-203ENST00000458610 MT-CO2P00403 227 aa12.3□□□□□ -0.44
CD28-203ENST00000458610 GP9P14770 177 aa12.3□□□□□ -0.44
CD28-203ENST00000458610 NPBWR1P48145 328 aa12.3□□□□□ -0.44
CD28-203ENST00000458610 ELLP55199 621 aaPredicted RBP12.3□□□□□ -0.44
CD28-203ENST00000458610 RELQ04864 619 aaPredicted RBP12.3□□□□□ -0.44
CD28-203ENST00000458610 UBAC2Q8NBM4 344 aa12.3□□□□□ -0.44
CD28-203ENST00000458610 OR1S1Q8NH92 325 aa12.3□□□□□ -0.44
CD28-203ENST00000458610 PTTG2Q9NZH5 202 aa12.3□□□□□ -0.44
CD28-203ENST00000458610 TMED3Q9Y3Q3 217 aa12.3□□□□□ -0.44
CD28-203ENST00000458610 IGHV3-21A0A0B4J1V1 117 aa12.29□□□□□ -0.44
CD28-203ENST00000458610 C2orf70A6NJV1 201 aa12.29□□□□□ -0.44
CD28-203ENST00000458610 A8MWP6 167 aa12.29□□□□□ -0.44
CD28-203ENST00000458610 RNASE2P10153 161 aaKnown RBP12.29□□□□□ -0.44
CD28-203ENST00000458610 SLC25A6P12236 298 aa12.29□□□□□ -0.44
CD28-203ENST00000458610 FOLR2P14207 255 aa12.29□□□□□ -0.44
CD28-203ENST00000458610 ATP5IP56385 69 aaPredicted RBP12.29□□□□□ -0.44
CD28-203ENST00000458610 PPP1R1AQ13522 171 aa12.29□□□□□ -0.44
CD28-203ENST00000458610 NMSQ5H8A3 153 aa12.29□□□□□ -0.44
CD28-203ENST00000458610 ZC4H2Q9NQZ6 224 aa12.29□□□□□ -0.44
CD28-203ENST00000458610 PRR13Q9NZ81 148 aa12.29□□□□□ -0.44
CD28-203ENST00000458610 RPS10-NUDT3A0A1W2PQS6 291 aa12.28□□□□□ -0.44
CD28-203ENST00000458610 NDUFA4O00483 81 aa12.28□□□□□ -0.44
CD28-203ENST00000458610 LYRM1O43325 122 aa12.28□□□□□ -0.44
CD28-203ENST00000458610 GNG7O60262 68 aa12.28□□□□□ -0.44
CD28-203ENST00000458610 CBLN1P23435 193 aa12.28□□□□□ -0.44
CD28-203ENST00000458610 PVRIGQ6DKI7 326 aa12.28□□□□□ -0.44
CD28-203ENST00000458610 COQ8AQ8NI60 647 aa12.28□□□□□ -0.44
CD28-203ENST00000458610 ZNF436Q9C0F3 470 aaPredicted RBP12.28□□□□□ -0.44
CD28-203ENST00000458610 WDR12Q9GZL7 423 aaKnown RBP12.28□□□□□ -0.44
CD28-203ENST00000458610 MRPL27Q9P0M9 148 aaKnown RBP12.28□□□□□ -0.44
CD28-203ENST00000458610 LSM4Q9Y4Z0 139 aaKnown RBP12.28□□□□□ -0.44
CD28-203ENST00000458610 SMAD5-AS1Q9Y6J3 95 aa12.28□□□□□ -0.44
CD28-203ENST00000458610 U3KQ87 197 aa12.28□□□□□ -0.44
CD28-203ENST00000458610 CMYA5Q8N3K9 4069 aa12.27□□□□□ -0.45
CD28-203ENST00000458610 C9orf170A2RU37 121 aa12.27□□□□□ -0.45
CD28-203ENST00000458610 MED6O75586 246 aa12.27□□□□□ -0.45
CD28-203ENST00000458610 CTSGP08311 255 aa12.27□□□□□ -0.45
CD28-203ENST00000458610 TNFRSF9Q07011 255 aa12.27□□□□□ -0.45
CD28-203ENST00000458610 ZNF846Q147U1 533 aa12.27□□□□□ -0.45
CD28-203ENST00000458610 BSXQ3C1V8 233 aa12.27□□□□□ -0.45
CD28-203ENST00000458610 ANKRD55Q3KP44 614 aa12.27□□□□□ -0.45
CD28-203ENST00000458610 C4orf46Q504U0 113 aa12.27□□□□□ -0.45
CD28-203ENST00000458610 C2orf83Q53S99 150 aa12.27□□□□□ -0.45
CD28-203ENST00000458610 ETFRF1Q6IPR1 90 aa12.27□□□□□ -0.45
CD28-203ENST00000458610 SLC24A4Q8NFF2 622 aa12.27□□□□□ -0.45
CD28-203ENST00000458610 RNASEH2CQ8TDP1 164 aaKnown RBP12.27□□□□□ -0.45
CD28-203ENST00000458610 HSPB7Q9UBY9 170 aa12.27□□□□□ -0.45
CD28-203ENST00000458610 FAM90A26D6RGX4 464 aa12.26□□□□□ -0.45
CD28-203ENST00000458610 K7EMT4 169 aa12.26□□□□□ -0.45
CD28-203ENST00000458610 PLA2G10O15496 165 aa12.26□□□□□ -0.45
CD28-203ENST00000458610 IFNA21P01568 189 aa12.26□□□□□ -0.45
CD28-203ENST00000458610 OR4E1P0C645 316 aa12.26□□□□□ -0.45
CD28-203ENST00000458610 OPRK1P41145 380 aa12.26□□□□□ -0.45
CD28-203ENST00000458610 CD69Q07108 199 aa12.26□□□□□ -0.45
CD28-203ENST00000458610 DEFB114Q30KQ6 69 aa12.26□□□□□ -0.45
CD28-203ENST00000458610 MZT2BQ6NZ67 158 aa12.26□□□□□ -0.45
CD28-203ENST00000458610 LYG2Q86SG7 212 aa12.26□□□□□ -0.45
CD28-203ENST00000458610 GTSCR1Q86UQ5 136 aa12.26□□□□□ -0.45
CD28-203ENST00000458610 UXS1Q8NBZ7 420 aa12.26□□□□□ -0.45
CD28-203ENST00000458610 TRAV30A0A087WSZ9 112 aa12.25□□□□□ -0.45
CD28-203ENST00000458610 IGHV3-35A0A0C4DH35 117 aa12.25□□□□□ -0.45
CD28-203ENST00000458610 TMEM213A2RRL7 107 aa12.25□□□□□ -0.45
CD28-203ENST00000458610 IFNA10P01566 189 aa12.25□□□□□ -0.45
CD28-203ENST00000458610 SLC25A4P12235 298 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms