RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 NPBWR1P48145 328 aa15.79■□□□□ 0.12
CPNE1-220ENST00000458038 KCTD21Q4G0X4 260 aa15.79■□□□□ 0.12
CPNE1-220ENST00000458038 PHLDA2Q53GA4 152 aa15.79■□□□□ 0.12
CPNE1-220ENST00000458038 TCF24Q7RTU0 167 aa15.79■□□□□ 0.12
CPNE1-220ENST00000458038 TBC1D26Q86UD7 250 aa15.79■□□□□ 0.12
CPNE1-220ENST00000458038 DUSP18Q8NEJ0 188 aa15.79■□□□□ 0.12
CPNE1-220ENST00000458038 IGKV3-7A0A075B6H7 116 aa15.78■□□□□ 0.12
CPNE1-220ENST00000458038 IGHV3-49A0A0A0MS15 119 aa15.78■□□□□ 0.12
CPNE1-220ENST00000458038 SMIM31A0A1B0GVY4 71 aa15.78■□□□□ 0.12
CPNE1-220ENST00000458038 DNASE2O00115 360 aaPredicted RBP15.78■□□□□ 0.12
CPNE1-220ENST00000458038 HLA-DMAP28067 261 aa15.78■□□□□ 0.12
CPNE1-220ENST00000458038 RPS19P39019 145 aaKnown RBP15.78■□□□□ 0.12
CPNE1-220ENST00000458038 ZNF124Q15973 351 aa15.78■□□□□ 0.12
CPNE1-220ENST00000458038 GBGT1Q8N5D6 347 aa15.78■□□□□ 0.12
CPNE1-220ENST00000458038 GPX8Q8TED1 209 aa15.78■□□□□ 0.12
CPNE1-220ENST00000458038 VSIRQ9H7M9 311 aa15.78■□□□□ 0.12
CPNE1-220ENST00000458038 SCPEP1Q9HB40 452 aa15.78■□□□□ 0.12
CPNE1-220ENST00000458038 NANOS2P60321 138 aaKnown RBP15.77■□□□□ 0.12
CPNE1-220ENST00000458038 TMEM187Q14656 261 aa15.77■□□□□ 0.12
CPNE1-220ENST00000458038 PINX1Q96BK5 328 aaKnown RBP15.77■□□□□ 0.12
CPNE1-220ENST00000458038 TMEM231Q9H6L2 316 aa15.77■□□□□ 0.12
CPNE1-220ENST00000458038 ST8SIA3O43173 380 aa15.76■□□□□ 0.11
CPNE1-220ENST00000458038 DEDDO75618 318 aa15.76■□□□□ 0.11
CPNE1-220ENST00000458038 CA1P00915 261 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-220ENST00000458038 SNCAP37840 140 aa15.76■□□□□ 0.11
CPNE1-220ENST00000458038 TOMM20LQ6UXN7 152 aa15.76■□□□□ 0.11
CPNE1-220ENST00000458038 ZNF600Q6ZNG1 722 aa15.76■□□□□ 0.11
CPNE1-220ENST00000458038 C2CD4CQ8TF44 421 aa15.76■□□□□ 0.11
CPNE1-220ENST00000458038 MS4A6AQ9H2W1 248 aa15.76■□□□□ 0.11
CPNE1-220ENST00000458038 FBXL17Q9UF56 701 aa15.76■□□□□ 0.11
CPNE1-220ENST00000458038 IGHV3OR16-13A0A075B7E8 117 aa15.75■□□□□ 0.11
CPNE1-220ENST00000458038 IGHV3-74A0A0B4J1X5 117 aa15.75■□□□□ 0.11
CPNE1-220ENST00000458038 INS-IGF2F8WCM5 200 aa15.75■□□□□ 0.11
CPNE1-220ENST00000458038 IGKV1-39P01597 117 aa15.75■□□□□ 0.11
CPNE1-220ENST00000458038 IGKV1D-39P04432 117 aa15.75■□□□□ 0.11
CPNE1-220ENST00000458038 SUB1P53999 127 aaKnown RBP eCLIP15.75■□□□□ 0.11
CPNE1-220ENST00000458038 TMEM41BQ5BJD5 291 aa15.75■□□□□ 0.11
CPNE1-220ENST00000458038 ST8SIA2Q92186 375 aa15.75■□□□□ 0.11
CPNE1-220ENST00000458038 MRGPRFQ96AM1 343 aa15.75■□□□□ 0.11
CPNE1-220ENST00000458038 A0A1W2PS18 150 aa15.74■□□□□ 0.11
CPNE1-220ENST00000458038 C11orf94C9JXX5 98 aa15.74■□□□□ 0.11
CPNE1-220ENST00000458038 CORTO00230 105 aa15.74■□□□□ 0.11
CPNE1-220ENST00000458038 ATG12O94817 140 aa15.74■□□□□ 0.11
CPNE1-220ENST00000458038 IGHV3-48P01763 117 aa15.74■□□□□ 0.11
CPNE1-220ENST00000458038 APOA1P02647 267 aa15.74■□□□□ 0.11
CPNE1-220ENST00000458038 RCVRNP35243 200 aa15.74■□□□□ 0.11
CPNE1-220ENST00000458038 PUS1Q9Y606 427 aaKnown RBP eCLIP15.74■□□□□ 0.11
CPNE1-220ENST00000458038 SCGB2A1O75556 95 aa15.73■□□□□ 0.11
CPNE1-220ENST00000458038 DEFB131AP59861 70 aa15.73■□□□□ 0.11
CPNE1-220ENST00000458038 RPL11P62913 178 aaKnown RBP15.73■□□□□ 0.11
CPNE1-220ENST00000458038 STHQ8IWL8 128 aa15.73■□□□□ 0.11
CPNE1-220ENST00000458038 ZNF486Q96H40 463 aaPredicted RBP15.73■□□□□ 0.11
CPNE1-220ENST00000458038 HRH4Q9H3N8 390 aa15.73■□□□□ 0.11
CPNE1-220ENST00000458038 VCX3AQ9NNX9 186 aa15.73■□□□□ 0.11
CPNE1-220ENST00000458038 TMEM50AO95807 157 aa15.72■□□□□ 0.11
CPNE1-220ENST00000458038 NPPCP23582 126 aa15.72■□□□□ 0.11
CPNE1-220ENST00000458038 TGFBR1P36897 503 aa15.72■□□□□ 0.11
CPNE1-220ENST00000458038 RND3P61587 244 aa15.72■□□□□ 0.11
CPNE1-220ENST00000458038 PVRIGQ6DKI7 326 aa15.72■□□□□ 0.11
CPNE1-220ENST00000458038 SLC35G3Q8N808 338 aa15.72■□□□□ 0.11
CPNE1-220ENST00000458038 ZFAND3Q9H8U3 227 aa15.72■□□□□ 0.11
CPNE1-220ENST00000458038 AGRNO00468 2067 aa15.72■□□□□ 0.11
CPNE1-220ENST00000458038 MORN3Q6PF18 240 aaPredicted RBP15.71■□□□□ 0.11
CPNE1-220ENST00000458038 LILRB2Q8N423 598 aa15.71■□□□□ 0.11
CPNE1-220ENST00000458038 YIPF6Q96EC8 236 aa15.71■□□□□ 0.11
CPNE1-220ENST00000458038 GRAMD2BQ96HH9 432 aa15.71■□□□□ 0.11
CPNE1-220ENST00000458038 PDCD10Q9BUL8 212 aa15.71■□□□□ 0.11
CPNE1-220ENST00000458038 IFNA17P01571 189 aa15.7■□□□□ 0.1
CPNE1-220ENST00000458038 APOHP02749 345 aaPredicted RBP15.7■□□□□ 0.1
CPNE1-220ENST00000458038 NARS2Q96I59 477 aaKnown RBP15.7■□□□□ 0.1
CPNE1-220ENST00000458038 COMMD3Q9UBI1 195 aa15.7■□□□□ 0.1
CPNE1-220ENST00000458038 RABAC1Q9UI14 185 aa15.7■□□□□ 0.1
CPNE1-220ENST00000458038 SPP1P10451 314 aa15.69■□□□□ 0.1
CPNE1-220ENST00000458038 LSM3P62310 102 aaKnown RBP15.69■□□□□ 0.1
CPNE1-220ENST00000458038 LEMD1Q68G75 181 aa15.69■□□□□ 0.1
CPNE1-220ENST00000458038 SNX29P2Q8IUI4 249 aa15.69■□□□□ 0.1
CPNE1-220ENST00000458038 CENPSQ8N2Z9 138 aa15.69■□□□□ 0.1
CPNE1-220ENST00000458038 METTL26Q96S19 204 aa15.69■□□□□ 0.1
CPNE1-220ENST00000458038 A0A0B4J293 547 aa15.68■□□□□ 0.1
CPNE1-220ENST00000458038 A0A1B0GU03 582 aa15.68■□□□□ 0.1
CPNE1-220ENST00000458038 P0C879 139 aa15.68■□□□□ 0.1
CPNE1-220ENST00000458038 MIFP14174 115 aa15.68■□□□□ 0.1
CPNE1-220ENST00000458038 PGAM2P15259 253 aa15.68■□□□□ 0.1
CPNE1-220ENST00000458038 CRYBB3P26998 211 aa15.68■□□□□ 0.1
CPNE1-220ENST00000458038 RPL5P46777 297 aaKnown RBP15.68■□□□□ 0.1
CPNE1-220ENST00000458038 AKR1C2P52895 323 aa15.68■□□□□ 0.1
CPNE1-220ENST00000458038 Q8NAQ8 132 aa15.68■□□□□ 0.1
CPNE1-220ENST00000458038 OR4X1Q8NH49 305 aa15.68■□□□□ 0.1
CPNE1-220ENST00000458038 ENY2Q9NPA8 101 aa15.68■□□□□ 0.1
CPNE1-220ENST00000458038 A0A087WXM4 84 aa15.67■□□□□ 0.1
CPNE1-220ENST00000458038 K7EQG2 157 aa15.67■□□□□ 0.1
CPNE1-220ENST00000458038 DEFB4AO15263 64 aa15.67■□□□□ 0.1
CPNE1-220ENST00000458038 CLN5O75503 358 aa15.67■□□□□ 0.1
CPNE1-220ENST00000458038 IGKV1-5P01602 117 aa15.67■□□□□ 0.1
CPNE1-220ENST00000458038 EIF2B2P49770 351 aaKnown RBP15.67■□□□□ 0.1
CPNE1-220ENST00000458038 PIGPP57054 158 aa15.67■□□□□ 0.1
CPNE1-220ENST00000458038 ARRDC1Q8N5I2 433 aa15.67■□□□□ 0.1
CPNE1-220ENST00000458038 KRTAP17-1Q9BYP8 105 aa15.67■□□□□ 0.1
CPNE1-220ENST00000458038 TRAV30A0A087WSZ9 112 aa15.66■□□□□ 0.1
CPNE1-220ENST00000458038 IGHV3-66A0A0C4DH42 116 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms