RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 TMEM177Q53S58 311 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 ZNF738Q8NE65 137 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 CARHSP1Q9Y2V2 147 aaKnown RBP8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 PRSS1P07477 247 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 PCP4P48539 62 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 HNRNPA3P51991 378 aaKnown RBP8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 FAM106AQ4KMX7 169 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TM4SF20Q53R12 229 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 C20orf204Q6ZNR8 217 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TEX29Q8N6K0 151 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 ARPC1AQ92747 370 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 FBXL7Q9UJT9 491 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 FOXA2Q9Y261 457 aaPredicted RBP8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TGIF2-C20orf24A0A0A6YYL0 155 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TMEM189A5PLL7 270 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 NBR2O15453 112 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 IGKV1-5P01602 117 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TRGV3P03979 118 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 RPL29P47914 159 aaKnown RBP8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 RAB9AP51151 201 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TMEM183BQ1AE95 376 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 CENPWQ5EE01 88 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 EEF1AKMT3Q96AZ1 226 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 AUP1Q9Y679 476 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 CEP295Q9C0D2 2601 aa8.32□□□□□ -1.08
CSGALNACT1-203ENST00000454498 IGHV3-49A0A0A0MS15 119 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 SMIM6P0DI80 62 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TDGF1P13385 188 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 RBPMS2Q6ZRY4 209 aaKnown RBP8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 NUP37Q8NFH4 326 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 OR10J6PQ8NGY7 276 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 WNT10AQ9GZT5 417 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 WDR83OSQ9Y284 106 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 IGHV3OR16-8A0A075B7F1 116 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 ZNF503-AS2A6NEH8 195 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TIMM23O14925 209 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 NBL1P41271 181 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 ELOBQ15370 118 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 C10orf55Q5SWW7 151 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 Q6ZS49 121 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 EIF4E3Q8N5X7 224 aaKnown RBP8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 HIST1H2BAQ96A08 127 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 WFDC1Q9HC57 220 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 CBY1Q9Y3M2 126 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TRAV34A0A0B4J273 112 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TNFSF13O75888 250 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 IGHV3-23P01764 117 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 PRCDQ00LT1 54 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 ICAM4Q14773 271 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 HERPUD1Q15011 391 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TMEM200BQ69YZ2 307 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 SPOCK3Q9BQ16 436 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 GSN-AS1Q9NRJ2 163 aa8.31□□□□□ -1.08
CSGALNACT1-203ENST00000454498 VENTXO95231 258 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 HLA-DQA1P01909 254 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 WT1P19544 449 aaPredicted RBP8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 GPX4P36969 197 aaPredicted RBP8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 ATP5G3P48201 142 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 ZNF124Q15973 351 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 MIR17HGQ75NE6 70 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 ST6GALNAC3Q8NDV1 305 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TNFRSF14Q92956 283 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 OBSL1O75147 1896 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 FGF16O43320 207 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 GNLYP22749 145 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 GPR183P32249 361 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 RELQ04864 619 aaPredicted RBP8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 CD69Q07108 199 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 LURAP1LQ8IV03 231 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 PRSS33Q8NF86 280 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 CLDND2Q8NHS1 167 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 NEUROG1Q92886 237 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TMEM191AQ9H0A3 160 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 CDH23Q9H251 3354 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 LY6HO94772 140 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 DKK1O94907 266 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 EBLN2Q6P2I7 272 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 OR52E5Q8NH55 327 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 RNF138Q8WVD3 245 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 SFRP2Q96HF1 295 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 DCAF16Q9NXF7 216 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 UNC80Q8N2C7 3258 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 IGHV1-8P0DP01 117 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 LINC00205P59089 165 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TEX45Q8NA69 505 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TMEM116Q8NCL8 245 aa8.3□□□□□ -1.08
CSGALNACT1-203ENST00000454498 TEX50A0A1B0GTY4 177 aa8.29□□□□□ -1.08
CSGALNACT1-203ENST00000454498 AMY1AP04745 511 aa8.29□□□□□ -1.08
CSGALNACT1-203ENST00000454498 MGPP08493 103 aa8.29□□□□□ -1.08
CSGALNACT1-203ENST00000454498 PTTG1IPP53801 180 aa8.29□□□□□ -1.08
CSGALNACT1-203ENST00000454498 DLX6P56179 175 aa8.29□□□□□ -1.08
CSGALNACT1-203ENST00000454498 CD81P60033 236 aa8.29□□□□□ -1.08
CSGALNACT1-203ENST00000454498 DGAT2L7PQ6IED9 249 aa8.29□□□□□ -1.08
CSGALNACT1-203ENST00000454498 CENPVQ7Z7K6 275 aaPredicted RBP8.29□□□□□ -1.08
CSGALNACT1-203ENST00000454498 OR10W1Q8NGF6 305 aa8.29□□□□□ -1.08
CSGALNACT1-203ENST00000454498 WNK1Q9H4A3 2382 aa8.29□□□□□ -1.08
CSGALNACT1-203ENST00000454498 LINC00473A8K010 186 aa8.29□□□□□ -1.08
CSGALNACT1-203ENST00000454498 PSG9Q00887 426 aa8.29□□□□□ -1.08
CSGALNACT1-203ENST00000454498 KIAA1644Q3SXP7 199 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms