RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SORL1Q92673 2214 aa15.24■□□□□ 0.03
COL9A3-202ENST00000452372 KMT2CQ8NEZ4 4911 aaKnown RBP15.23■□□□□ 0.03
COL9A3-202ENST00000452372 A0A1B0GU03 582 aa15.23■□□□□ 0.03
COL9A3-202ENST00000452372 C9orf170A2RU37 121 aa15.23■□□□□ 0.03
COL9A3-202ENST00000452372 OR2C1O95371 312 aa15.23■□□□□ 0.03
COL9A3-202ENST00000452372 OR4E1P0C645 316 aa15.23■□□□□ 0.03
COL9A3-202ENST00000452372 ARL3P36405 182 aa15.23■□□□□ 0.03
COL9A3-202ENST00000452372 HOXA1P49639 335 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-202ENST00000452372 SMCO1Q147U7 214 aa15.23■□□□□ 0.03
COL9A3-202ENST00000452372 SCARB1Q8WTV0 552 aa15.23■□□□□ 0.03
COL9A3-202ENST00000452372 OR4C12Q96R67 309 aa15.23■□□□□ 0.03
COL9A3-202ENST00000452372 TENM3Q9P273 2699 aa15.23■□□□□ 0.03
COL9A3-202ENST00000452372 HLA-AP01891 365 aaKnown RBP15.22■□□□□ 0.03
COL9A3-202ENST00000452372 GPR183P32249 361 aa15.22■□□□□ 0.03
COL9A3-202ENST00000452372 SUB1P53999 127 aaKnown RBP eCLIP15.22■□□□□ 0.03
COL9A3-202ENST00000452372 PVRIGQ6DKI7 326 aa15.22■□□□□ 0.03
COL9A3-202ENST00000452372 GPHB5Q86YW7 130 aa15.22■□□□□ 0.03
COL9A3-202ENST00000452372 C21orf62Q9NYP8 219 aa15.22■□□□□ 0.03
COL9A3-202ENST00000452372 TMED3Q9Y3Q3 217 aa15.22■□□□□ 0.03
COL9A3-202ENST00000452372 IGHV3-21A0A0B4J1V1 117 aa15.21■□□□□ 0.03
COL9A3-202ENST00000452372 I3L2K1 104 aa15.21■□□□□ 0.03
COL9A3-202ENST00000452372 UPK1BO75841 260 aa15.21■□□□□ 0.03
COL9A3-202ENST00000452372 TCRBP04435 133 aa15.21■□□□□ 0.03
COL9A3-202ENST00000452372 RNASE2P10153 161 aaKnown RBP15.21■□□□□ 0.03
COL9A3-202ENST00000452372 ANXA7P20073 488 aaKnown RBP15.21■□□□□ 0.03
COL9A3-202ENST00000452372 DHRS2Q13268 280 aa15.21■□□□□ 0.03
COL9A3-202ENST00000452372 IL34Q6ZMJ4 242 aa15.21■□□□□ 0.03
COL9A3-202ENST00000452372 LYG2Q86SG7 212 aa15.21■□□□□ 0.03
COL9A3-202ENST00000452372 MISP3Q96FF7 219 aa15.21■□□□□ 0.03
COL9A3-202ENST00000452372 C20orf85Q9H1P6 137 aa15.21■□□□□ 0.03
COL9A3-202ENST00000452372 HEYLQ9NQ87 328 aaPredicted RBP15.21■□□□□ 0.03
COL9A3-202ENST00000452372 HSPB7Q9UBY9 170 aa15.21■□□□□ 0.03
COL9A3-202ENST00000452372 TBC1D24Q9ULP9 559 aa15.21■□□□□ 0.03
COL9A3-202ENST00000452372 PITX3O75364 302 aa15.2■□□□□ 0.02
COL9A3-202ENST00000452372 SLC25A6P12236 298 aa15.2■□□□□ 0.02
COL9A3-202ENST00000452372 ASAH1Q13510 395 aa15.2■□□□□ 0.02
COL9A3-202ENST00000452372 BSXQ3C1V8 233 aa15.2■□□□□ 0.02
COL9A3-202ENST00000452372 C4orf46Q504U0 113 aa15.2■□□□□ 0.02
COL9A3-202ENST00000452372 MZT2BQ6NZ67 158 aa15.2■□□□□ 0.02
COL9A3-202ENST00000452372 PLET1Q6UQ28 207 aa15.2■□□□□ 0.02
COL9A3-202ENST00000452372 PEMTQ9UBM1 199 aa15.2■□□□□ 0.02
COL9A3-202ENST00000452372 CEBPZOSA8MTT3 80 aa15.19■□□□□ 0.02
COL9A3-202ENST00000452372 F8W735 103 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-202ENST00000452372 LGALS9O00182 355 aa15.19■□□□□ 0.02
COL9A3-202ENST00000452372 TGOLN2O43493 480 aa15.19■□□□□ 0.02
COL9A3-202ENST00000452372 MT-CO2P00403 227 aa15.19■□□□□ 0.02
COL9A3-202ENST00000452372 CSN3P07498 182 aa15.19■□□□□ 0.02
COL9A3-202ENST00000452372 HOXB5P09067 269 aa15.19■□□□□ 0.02
COL9A3-202ENST00000452372 FCGR2BP31994 310 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-202ENST00000452372 TNFRSF9Q07011 255 aa15.19■□□□□ 0.02
COL9A3-202ENST00000452372 FAM106AQ4KMX7 169 aa15.19■□□□□ 0.02
COL9A3-202ENST00000452372 DEFB121Q5J5C9 76 aa15.19■□□□□ 0.02
COL9A3-202ENST00000452372 OR1S1Q8NH92 325 aa15.19■□□□□ 0.02
COL9A3-202ENST00000452372 COQ8AQ8NI60 647 aa15.19■□□□□ 0.02
COL9A3-202ENST00000452372 BSCL2Q96G97 398 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-202ENST00000452372 ZC4H2Q9NQZ6 224 aa15.19■□□□□ 0.02
COL9A3-202ENST00000452372 GAR1Q9NY12 217 aaKnown RBP15.19■□□□□ 0.02
COL9A3-202ENST00000452372 SIGLEC8Q9NYZ4 499 aa15.19■□□□□ 0.02
COL9A3-202ENST00000452372 FAM240BA0A1B0GVZ2 78 aa15.18■□□□□ 0.02
COL9A3-202ENST00000452372 OR2T8A6NH00 312 aa15.18■□□□□ 0.02
COL9A3-202ENST00000452372 CORTO00230 105 aa15.18■□□□□ 0.02
COL9A3-202ENST00000452372 NXPH3O95157 252 aa15.18■□□□□ 0.02
COL9A3-202ENST00000452372 HTR2BP41595 481 aa15.18■□□□□ 0.02
COL9A3-202ENST00000452372 IFITM3Q01628 133 aa15.18■□□□□ 0.02
COL9A3-202ENST00000452372 GGNBP1Q5YKI7 109 aa15.18■□□□□ 0.02
COL9A3-202ENST00000452372 C11orf87Q6NUJ2 197 aa15.18■□□□□ 0.02
COL9A3-202ENST00000452372 SPSB3Q6PJ21 355 aa15.18■□□□□ 0.02
COL9A3-202ENST00000452372 PINX1Q96BK5 328 aaKnown RBP15.18■□□□□ 0.02
COL9A3-202ENST00000452372 TXN2Q99757 166 aa15.18■□□□□ 0.02
COL9A3-202ENST00000452372 HIPK2Q9H2X6 1198 aa15.18■□□□□ 0.02
COL9A3-202ENST00000452372 TRAV6A0A075B6T7 132 aa15.17■□□□□ 0.02
COL9A3-202ENST00000452372 IGLV1-51P01701 117 aa15.17■□□□□ 0.02
COL9A3-202ENST00000452372 MFAP4P55083 255 aa15.17■□□□□ 0.02
COL9A3-202ENST00000452372 C2orf83Q53S99 150 aa15.17■□□□□ 0.02
COL9A3-202ENST00000452372 Q56UQ5 140 aa15.17■□□□□ 0.02
COL9A3-202ENST00000452372 RBKSQ9H477 322 aa15.17■□□□□ 0.02
COL9A3-202ENST00000452372 NUDT15Q9NV35 164 aa15.17■□□□□ 0.02
COL9A3-202ENST00000452372 FAM90A26D6RGX4 464 aa15.16■□□□□ 0.02
COL9A3-202ENST00000452372 CTSGP08311 255 aa15.16■□□□□ 0.02
COL9A3-202ENST00000452372 H2AFB2P0C5Z0 115 aa15.16■□□□□ 0.02
COL9A3-202ENST00000452372 UBAC2Q8NBM4 344 aa15.16■□□□□ 0.02
COL9A3-202ENST00000452372 CHRDL1Q9BU40 450 aa15.16■□□□□ 0.02
COL9A3-202ENST00000452372 ZNF436Q9C0F3 470 aaPredicted RBP15.16■□□□□ 0.02
COL9A3-202ENST00000452372 ZNF256Q9Y2P7 627 aaPredicted RBP15.16■□□□□ 0.02
COL9A3-202ENST00000452372 ADAP1O75689 374 aa15.15■□□□□ 0.02
COL9A3-202ENST00000452372 IGHV3-48P01763 117 aa15.15■□□□□ 0.02
COL9A3-202ENST00000452372 ADMP35318 185 aa15.15■□□□□ 0.02
COL9A3-202ENST00000452372 SLC24A4Q8NFF2 622 aa15.15■□□□□ 0.02
COL9A3-202ENST00000452372 DTD1Q8TEA8 209 aa15.15■□□□□ 0.02
COL9A3-202ENST00000452372 MITD1Q8WV92 249 aa15.15■□□□□ 0.02
COL9A3-202ENST00000452372 U3KQ87 197 aa15.15■□□□□ 0.02
COL9A3-202ENST00000452372 IGHV3-35A0A0C4DH35 117 aa15.14■□□□□ 0.01
COL9A3-202ENST00000452372 ZNF320A2RRD8 509 aa15.14■□□□□ 0.01
COL9A3-202ENST00000452372 C2orf70A6NJV1 201 aa15.14■□□□□ 0.01
COL9A3-202ENST00000452372 A8MWP6 167 aa15.14■□□□□ 0.01
COL9A3-202ENST00000452372 IFNA21P01568 189 aa15.14■□□□□ 0.01
COL9A3-202ENST00000452372 SPNP16150 400 aa15.14■□□□□ 0.01
COL9A3-202ENST00000452372 NPBWR1P48145 328 aa15.14■□□□□ 0.01
COL9A3-202ENST00000452372 ADAMTSL5Q6ZMM2 481 aa15.14■□□□□ 0.01
COL9A3-202ENST00000452372 NOXA1Q86UR1 476 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms