RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 OR6F1Q8NGZ6 308 aa8□□□□□ -1.13
USP1-204ENST00000452143 C11orf45Q8TAV5 145 aa8□□□□□ -1.13
USP1-204ENST00000452143 SLC25A46Q96AG3 418 aa8□□□□□ -1.13
USP1-204ENST00000452143 ZNF414Q96IQ9 312 aa8□□□□□ -1.13
USP1-204ENST00000452143 GINS3Q9BRX5 216 aa8□□□□□ -1.13
USP1-204ENST00000452143 I3L2K1 104 aa7.99□□□□□ -1.13
USP1-204ENST00000452143 GNG7O60262 68 aa7.99□□□□□ -1.13
USP1-204ENST00000452143 DEDDO75618 318 aa7.99□□□□□ -1.13
USP1-204ENST00000452143 YIF1AO95070 293 aa7.99□□□□□ -1.13
USP1-204ENST00000452143 PMP2P02689 132 aa7.99□□□□□ -1.13
USP1-204ENST00000452143 IFNA4P05014 189 aa7.99□□□□□ -1.13
USP1-204ENST00000452143 EIF4EP06730 217 aaKnown RBP7.99□□□□□ -1.13
USP1-204ENST00000452143 TAS2R20P59543 309 aa7.99□□□□□ -1.13
USP1-204ENST00000452143 PRCDQ00LT1 54 aa7.99□□□□□ -1.13
USP1-204ENST00000452143 FAM90A2PQ658T7 463 aa7.99□□□□□ -1.13
USP1-204ENST00000452143 LPCAT3Q6P1A2 487 aa7.99□□□□□ -1.13
USP1-204ENST00000452143 MISP3Q96FF7 219 aa7.99□□□□□ -1.13
USP1-204ENST00000452143 PCLOQ9Y6V0 5065 aa7.99□□□□□ -1.13
USP1-204ENST00000452143 TRAV2A0A0B4J234 112 aa7.98□□□□□ -1.13
USP1-204ENST00000452143 DBX1A6NMT0 343 aa7.98□□□□□ -1.13
USP1-204ENST00000452143 DFFBO76075 338 aa7.98□□□□□ -1.13
USP1-204ENST00000452143 MT-CO2P00403 227 aa7.98□□□□□ -1.13
USP1-204ENST00000452143 CA1P00915 261 aaPredicted RBP7.98□□□□□ -1.13
USP1-204ENST00000452143 PRSS3P35030 304 aa7.98□□□□□ -1.13
USP1-204ENST00000452143 HRH1P35367 487 aa7.98□□□□□ -1.13
USP1-204ENST00000452143 TFPI2P48307 235 aa7.98□□□□□ -1.13
USP1-204ENST00000452143 NEDD8Q15843 81 aa7.98□□□□□ -1.13
USP1-204ENST00000452143 ZNF124Q15973 351 aa7.98□□□□□ -1.13
USP1-204ENST00000452143 SAMD12Q8N8I0 201 aa7.98□□□□□ -1.13
USP1-204ENST00000452143 OR11H2Q8NH07 326 aa7.98□□□□□ -1.13
USP1-204ENST00000452143 OR4A16Q8NH70 328 aa7.98□□□□□ -1.13
USP1-204ENST00000452143 SEC22AQ96IW7 307 aa7.98□□□□□ -1.13
USP1-204ENST00000452143 IGKV3-7A0A075B6H7 116 aa7.97□□□□□ -1.13
USP1-204ENST00000452143 IGHV3-49A0A0A0MS15 119 aa7.97□□□□□ -1.13
USP1-204ENST00000452143 NPBWR1P48145 328 aa7.97□□□□□ -1.13
USP1-204ENST00000452143 NANOS2P60321 138 aaKnown RBP7.97□□□□□ -1.13
USP1-204ENST00000452143 ERHP84090 104 aaKnown RBP7.97□□□□□ -1.13
USP1-204ENST00000452143 TMEM187Q14656 261 aa7.97□□□□□ -1.13
USP1-204ENST00000452143 PHLDA2Q53GA4 152 aa7.97□□□□□ -1.13
USP1-204ENST00000452143 TMEM41BQ5BJD5 291 aa7.97□□□□□ -1.13
USP1-204ENST00000452143 TCF24Q7RTU0 167 aa7.97□□□□□ -1.13
USP1-204ENST00000452143 H2BFWTQ7Z2G1 175 aa7.97□□□□□ -1.13
USP1-204ENST00000452143 TBC1D26Q86UD7 250 aa7.97□□□□□ -1.13
USP1-204ENST00000452143 C2CD4CQ8TF44 421 aa7.97□□□□□ -1.13
USP1-204ENST00000452143 HRH4Q9H3N8 390 aa7.97□□□□□ -1.13
USP1-204ENST00000452143 TMEM231Q9H6L2 316 aa7.97□□□□□ -1.13
USP1-204ENST00000452143 VSIRQ9H7M9 311 aa7.97□□□□□ -1.13
USP1-204ENST00000452143 KIAA1109Q2LD37 5005 aa7.96□□□□□ -1.13
USP1-204ENST00000452143 C11orf94C9JXX5 98 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 INS-IGF2F8WCM5 200 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 ST8SIA3O43173 380 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 ATP6V1G2O95670 118 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 HLA-DMAP28067 261 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 UCP3P55916 312 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 HSPE1P61604 102 aaKnown RBP7.96□□□□□ -1.14
USP1-204ENST00000452143 TSPAN5P62079 268 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 KCTD21Q4G0X4 260 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 TOMM20LQ6UXN7 152 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 ZNF600Q6ZNG1 722 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 GBGT1Q8N5D6 347 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 DUSP18Q8NEJ0 188 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 ST8SIA2Q92186 375 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 MRGPRFQ96AM1 343 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 PINX1Q96BK5 328 aaKnown RBP7.96□□□□□ -1.14
USP1-204ENST00000452143 KRTAP17-1Q9BYP8 105 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 MS4A6AQ9H2W1 248 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 SCPEP1Q9HB40 452 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 FBXL17Q9UF56 701 aa7.96□□□□□ -1.14
USP1-204ENST00000452143 IGHV3OR16-13A0A075B7E8 117 aa7.95□□□□□ -1.14
USP1-204ENST00000452143 IGHV3-74A0A0B4J1X5 117 aa7.95□□□□□ -1.14
USP1-204ENST00000452143 DNASE2O00115 360 aaPredicted RBP7.95□□□□□ -1.14
USP1-204ENST00000452143 CORTO00230 105 aa7.95□□□□□ -1.14
USP1-204ENST00000452143 SCGB2A1O75556 95 aa7.95□□□□□ -1.14
USP1-204ENST00000452143 IGKV1-39P01597 117 aa7.95□□□□□ -1.14
USP1-204ENST00000452143 IGKV1D-39P04432 117 aa7.95□□□□□ -1.14
USP1-204ENST00000452143 LCE3BQ5TA77 95 aa7.95□□□□□ -1.14
USP1-204ENST00000452143 LYSMD2Q8IV50 215 aa7.95□□□□□ -1.14
USP1-204ENST00000452143 GPX8Q8TED1 209 aa7.95□□□□□ -1.14
USP1-204ENST00000452143 PUS1Q9Y606 427 aaKnown RBP eCLIP7.95□□□□□ -1.14
USP1-204ENST00000452143 A0A1W2PS18 150 aa7.94□□□□□ -1.14
USP1-204ENST00000452143 IGHV3-48P01763 117 aa7.94□□□□□ -1.14
USP1-204ENST00000452143 SPP1P10451 314 aa7.94□□□□□ -1.14
USP1-204ENST00000452143 RCVRNP35243 200 aa7.94□□□□□ -1.14
USP1-204ENST00000452143 TGFBR1P36897 503 aa7.94□□□□□ -1.14
USP1-204ENST00000452143 SNCAP37840 140 aa7.94□□□□□ -1.14
USP1-204ENST00000452143 RPS19P39019 145 aaKnown RBP7.94□□□□□ -1.14
USP1-204ENST00000452143 DEFB131AP59861 70 aa7.94□□□□□ -1.14
USP1-204ENST00000452143 LEMD1Q68G75 181 aa7.94□□□□□ -1.14
USP1-204ENST00000452143 PVRIGQ6DKI7 326 aa7.94□□□□□ -1.14
USP1-204ENST00000452143 STHQ8IWL8 128 aa7.94□□□□□ -1.14
USP1-204ENST00000452143 Q8NAQ8 132 aa7.94□□□□□ -1.14
USP1-204ENST00000452143 ZNF486Q96H40 463 aaPredicted RBP7.94□□□□□ -1.14
USP1-204ENST00000452143 AGRNO00468 2067 aa7.93□□□□□ -1.14
USP1-204ENST00000452143 SMIM31A0A1B0GVY4 71 aa7.93□□□□□ -1.14
USP1-204ENST00000452143 ATG12O94817 140 aa7.93□□□□□ -1.14
USP1-204ENST00000452143 APOA1P02647 267 aa7.93□□□□□ -1.14
USP1-204ENST00000452143 APOHP02749 345 aaPredicted RBP7.93□□□□□ -1.14
USP1-204ENST00000452143 MIFP14174 115 aa7.93□□□□□ -1.14
USP1-204ENST00000452143 AKR1C2P52895 323 aa7.93□□□□□ -1.14
USP1-204ENST00000452143 SUB1P53999 127 aaKnown RBP eCLIP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms