RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 IGKV1-39P01597 117 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 IGKV1-5P01602 117 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 IGKV1D-39P04432 117 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 HTR1DP28221 377 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 OR10AG1Q8NH19 301 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 PERPQ96FX8 193 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 PTPRBP23467 1997 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 TEX48A0A1B0GUV7 120 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 GAGE12HA6NDE8 117 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 IGHV3-9P01782 118 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 KIR2DS2P43631 304 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 ZNF497Q6ZNH5 498 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 HLA-DRB1P01911 266 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 SP1P08047 785 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 MEF2CQ06413 473 aaPredicted RBP11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 CD300EQ496F6 205 aaPredicted RBP11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 C9orf135Q5VTT2 229 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 EAF1Q96JC9 268 aaPredicted RBP11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 OR2V2Q96R30 315 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 OR2D2Q9H210 308 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 SCRT2Q9NQ03 307 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 OR1A1Q9P1Q5 309 aa11.13□□□□□ -0.63
SYNGAP1-204ENST00000449372 SPAARA0A1B0GVQ0 90 aa11.12□□□□□ -0.63
SYNGAP1-204ENST00000449372 FAM90A9PA6NNJ1 464 aa11.12□□□□□ -0.63
SYNGAP1-204ENST00000449372 RHBDL1O75783 438 aa11.12□□□□□ -0.63
SYNGAP1-204ENST00000449372 MGST1P10620 155 aaKnown RBP11.12□□□□□ -0.63
SYNGAP1-204ENST00000449372 ODF1Q14990 250 aa11.12□□□□□ -0.63
SYNGAP1-204ENST00000449372 TMEM177Q53S58 311 aa11.12□□□□□ -0.63
SYNGAP1-204ENST00000449372 TSSC4Q9Y5U2 329 aaPredicted RBP11.12□□□□□ -0.63
SYNGAP1-204ENST00000449372 FXYD3Q14802 87 aa11.12□□□□□ -0.63
SYNGAP1-204ENST00000449372 OR2H2O95918 312 aa11.12□□□□□ -0.63
SYNGAP1-204ENST00000449372 ARL14EPLP0DKL9 152 aa11.12□□□□□ -0.63
SYNGAP1-204ENST00000449372 CA6P23280 308 aa11.12□□□□□ -0.63
SYNGAP1-204ENST00000449372 HEYLQ9NQ87 328 aaPredicted RBP11.12□□□□□ -0.63
SYNGAP1-204ENST00000449372 F2RL2O00254 374 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 RTL8BQ17RB0 113 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 TMEM97Q5BJF2 176 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 ATP1A1-AS1Q5TC04 95 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 SLC35E4Q6ICL7 350 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 CCDC144NLQ6NUI1 221 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 LINC00696Q6ZRV3 163 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 OR5A1Q8NGJ0 315 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 TNFRSF19Q9NS68 423 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 TECRQ9NZ01 308 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 H3BRM9 83 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 ADH4P08319 380 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 CD1BP29016 333 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 GEMIN7Q9H840 131 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 ZNF331Q9NQX6 463 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 ZNF207O43670 478 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 STAG3L2P0CL84 134 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 HIST1H1EP10412 219 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 EDDM3BP56851 147 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 ZNF816Q0VGE8 651 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 FER1L6-AS2Q96M78 137 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 RNASE7Q9H1E1 156 aaKnown RBP11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 SPCS1Q9Y6A9 102 aa11.11□□□□□ -0.63
SYNGAP1-204ENST00000449372 MTURNQ8N3F0 131 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 HINT2Q9BX68 163 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 TMEM191AQ9H0A3 160 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 LY96Q9Y6Y9 160 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 SNAI2O43623 268 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 REG1BP48304 166 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 BPIFA4PQ86YQ2 179 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 SPACA3Q8IXA5 215 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 MBNL3Q9NUK0 354 aaKnown RBP11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 AHCTF1Q8WYP5 2266 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 PSMB11A5LHX3 300 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 A6NDN8 102 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 ZNF503-AS2A6NEH8 195 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 C9JCJ5 164 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 SYS1-DBNDD2H3BUS1 97 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 STPG3Q8N7X2 389 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 VSTM2AQ8TAG5 236 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 ZNF835Q9Y2P0 537 aa11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 KLF13Q9Y2Y9 288 aaPredicted RBP11.1□□□□□ -0.63
SYNGAP1-204ENST00000449372 SS18L1O75177 396 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 OPRK1P41145 380 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 MEOX1P50221 254 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 C5orf64Q2M2E5 130 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 ZNF585BQ52M93 769 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 TCTEX1D4Q5JR98 221 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 DOLPP1Q86YN1 238 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 TUSC5Q8IXB3 177 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 WDR83OSQ9Y284 106 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 FREM1Q5H8C1 2179 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 CRXO43186 299 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 FTH1P19P0C7X4 201 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 G6PCP35575 357 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 FOXG1P55316 489 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 FAM162BQ5T6X4 162 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 SAP30LQ9HAJ7 183 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 YTHDF2Q9Y5A9 579 aaKnown RBP11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 TNRC6AQ8NDV7 1962 aaKnown RBP11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 KLRC4-KLRK1H3BQV0 150 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 RPL8P62917 257 aaKnown RBP11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 ZNF146Q15072 292 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 Q6P435 159 aa11.09□□□□□ -0.63
SYNGAP1-204ENST00000449372 ZNF808Q8N4W9 903 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms