RNA–Protein interactions for RNA: ENST00000448992.5

RHBDD1-209, Transcript of rhomboid domain containing 1, humanhuman

TSL 4

Gene RHBDD1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-209ENST00000448992 ZNF114Q8NC26 417 aa11.11□□□□□ -0.63
RHBDD1-209ENST00000448992 C11orf68Q9H3H3 251 aaKnown RBP11.11□□□□□ -0.63
RHBDD1-209ENST00000448992 IGHV3OR16-13A0A075B7E8 117 aa11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 IGHV3-74A0A0B4J1X5 117 aa11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 SMIM31A0A1B0GVY4 71 aa11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 ST8SIA3O43173 380 aa11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 IGHV3-48P01763 117 aa11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 RPS19P39019 145 aaKnown RBP11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 NPBWR1P48145 328 aa11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 NANOS2P60321 138 aaKnown RBP11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 TMEM187Q14656 261 aa11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 KCTD21Q4G0X4 260 aa11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 DUSP18Q8NEJ0 188 aa11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 MRGPRFQ96AM1 343 aa11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 SEC22AQ96IW7 307 aa11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 TMEM231Q9H6L2 316 aa11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 VCX3AQ9NNX9 186 aa11.1□□□□□ -0.63
RHBDD1-209ENST00000448992 SCGB2A1O75556 95 aa11.09□□□□□ -0.63
RHBDD1-209ENST00000448992 DEDDO75618 318 aa11.09□□□□□ -0.63
RHBDD1-209ENST00000448992 DFFBO76075 338 aa11.09□□□□□ -0.63
RHBDD1-209ENST00000448992 TGFBR1P36897 503 aa11.09□□□□□ -0.63
RHBDD1-209ENST00000448992 SNCAP37840 140 aa11.09□□□□□ -0.63
RHBDD1-209ENST00000448992 HSPE1P61604 102 aaKnown RBP11.09□□□□□ -0.63
RHBDD1-209ENST00000448992 FAM90A2PQ658T7 463 aa11.09□□□□□ -0.63
RHBDD1-209ENST00000448992 LYSMD2Q8IV50 215 aa11.09□□□□□ -0.63
RHBDD1-209ENST00000448992 SLC35G3Q8N808 338 aa11.09□□□□□ -0.63
RHBDD1-209ENST00000448992 C2CD4CQ8TF44 421 aa11.09□□□□□ -0.63
RHBDD1-209ENST00000448992 PDCD10Q9BUL8 212 aa11.09□□□□□ -0.63
RHBDD1-209ENST00000448992 CORTO00230 105 aa11.08□□□□□ -0.64
RHBDD1-209ENST00000448992 RCVRNP35243 200 aa11.08□□□□□ -0.64
RHBDD1-209ENST00000448992 TCTAP57738 103 aa11.08□□□□□ -0.64
RHBDD1-209ENST00000448992 LSM3P62310 102 aaKnown RBP11.08□□□□□ -0.64
RHBDD1-209ENST00000448992 TOMM20LQ6UXN7 152 aa11.08□□□□□ -0.64
RHBDD1-209ENST00000448992 ST8SIA2Q92186 375 aa11.08□□□□□ -0.64
RHBDD1-209ENST00000448992 MS4A6AQ9H2W1 248 aa11.08□□□□□ -0.64
RHBDD1-209ENST00000448992 SCPEP1Q9HB40 452 aa11.08□□□□□ -0.64
RHBDD1-209ENST00000448992 TRAV2A0A0B4J234 112 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 ATG12O94817 140 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 SUB1P53999 127 aaKnown RBP eCLIP11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 UCP3P55916 312 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 DEFB131AP59861 70 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 SPINK9Q5DT21 86 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 LEMD1Q68G75 181 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 ZNF600Q6ZNG1 722 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 SNX29P2Q8IUI4 249 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 STHQ8IWL8 128 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 CENPSQ8N2Z9 138 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 GPX8Q8TED1 209 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 VSIRQ9H7M9 311 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 ENY2Q9NPA8 101 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 COMMD3Q9UBI1 195 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 RABAC1Q9UI14 185 aa11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 PUS1Q9Y606 427 aaKnown RBP eCLIP11.07□□□□□ -0.64
RHBDD1-209ENST00000448992 IGHV3-66A0A0C4DH42 116 aa11.06□□□□□ -0.64
RHBDD1-209ENST00000448992 A0A1W2PS18 150 aa11.06□□□□□ -0.64
RHBDD1-209ENST00000448992 IFNA17P01571 189 aa11.06□□□□□ -0.64
RHBDD1-209ENST00000448992 PGAM2P15259 253 aa11.06□□□□□ -0.64
RHBDD1-209ENST00000448992 AKR1C2P52895 323 aa11.06□□□□□ -0.64
RHBDD1-209ENST00000448992 NARS2Q96I59 477 aaKnown RBP11.06□□□□□ -0.64
RHBDD1-209ENST00000448992 ZNF414Q96IQ9 312 aa11.06□□□□□ -0.64
RHBDD1-209ENST00000448992 DEFB4AO15263 64 aa11.05□□□□□ -0.64
RHBDD1-209ENST00000448992 IGKV1-39P01597 117 aa11.05□□□□□ -0.64
RHBDD1-209ENST00000448992 APOA1P02647 267 aa11.05□□□□□ -0.64
RHBDD1-209ENST00000448992 IGKV1D-39P04432 117 aa11.05□□□□□ -0.64
RHBDD1-209ENST00000448992 NPPCP23582 126 aa11.05□□□□□ -0.64
RHBDD1-209ENST00000448992 HOXA1P49639 335 aaPredicted RBP11.05□□□□□ -0.64
RHBDD1-209ENST00000448992 TMEM41BQ5BJD5 291 aa11.05□□□□□ -0.64
RHBDD1-209ENST00000448992 ZNF486Q96H40 463 aaPredicted RBP11.05□□□□□ -0.64
RHBDD1-209ENST00000448992 METTL26Q96S19 204 aa11.05□□□□□ -0.64
RHBDD1-209ENST00000448992 C11orf94C9JXX5 98 aa11.04□□□□□ -0.64
RHBDD1-209ENST00000448992 APOHP02749 345 aaPredicted RBP11.04□□□□□ -0.64
RHBDD1-209ENST00000448992 OPRK1P41145 380 aa11.04□□□□□ -0.64
RHBDD1-209ENST00000448992 TRIM16LQ309B1 348 aa11.04□□□□□ -0.64
RHBDD1-209ENST00000448992 STXBP6Q8NFX7 210 aa11.04□□□□□ -0.64
RHBDD1-209ENST00000448992 RNASE11Q8TAA1 199 aaKnown RBP11.04□□□□□ -0.64
RHBDD1-209ENST00000448992 YIPF6Q96EC8 236 aa11.04□□□□□ -0.64
RHBDD1-209ENST00000448992 ZFAND3Q9H8U3 227 aa11.04□□□□□ -0.64
RHBDD1-209ENST00000448992 FRAS1Q86XX4 4008 aa11.04□□□□□ -0.64
RHBDD1-209ENST00000448992 IGLL5B9A064 214 aa11.03□□□□□ -0.64
RHBDD1-209ENST00000448992 TMEM50AO95807 157 aa11.03□□□□□ -0.64
RHBDD1-209ENST00000448992 EIF2B2P49770 351 aaKnown RBP11.03□□□□□ -0.64
RHBDD1-209ENST00000448992 PIGPP57054 158 aa11.03□□□□□ -0.64
RHBDD1-209ENST00000448992 RND3P61587 244 aa11.03□□□□□ -0.64
RHBDD1-209ENST00000448992 IZUMO4Q1ZYL8 232 aa11.03□□□□□ -0.64
RHBDD1-209ENST00000448992 RNASE10Q5GAN6 216 aaKnown RBP11.03□□□□□ -0.64
RHBDD1-209ENST00000448992 MORN3Q6PF18 240 aaPredicted RBP11.03□□□□□ -0.64
RHBDD1-209ENST00000448992 TMEM230Q96A57 120 aa11.03□□□□□ -0.64
RHBDD1-209ENST00000448992 GRAMD2BQ96HH9 432 aa11.03□□□□□ -0.64
RHBDD1-209ENST00000448992 A0A087WXM4 84 aa11.02□□□□□ -0.65
RHBDD1-209ENST00000448992 C3orf85A0A1B0GTC6 90 aa11.02□□□□□ -0.65
RHBDD1-209ENST00000448992 INS-IGF2F8WCM5 200 aa11.02□□□□□ -0.65
RHBDD1-209ENST00000448992 M0QYG6 137 aa11.02□□□□□ -0.65
RHBDD1-209ENST00000448992 SPP1P10451 314 aa11.02□□□□□ -0.65
RHBDD1-209ENST00000448992 LILRB2Q8N423 598 aa11.02□□□□□ -0.65
RHBDD1-209ENST00000448992 FAM24BQ8N5W8 94 aa11.02□□□□□ -0.65
RHBDD1-209ENST00000448992 CCDC71LQ8N9Z2 235 aa11.02□□□□□ -0.65
RHBDD1-209ENST00000448992 RRNAD1Q96FB5 475 aaKnown RBP11.02□□□□□ -0.65
RHBDD1-209ENST00000448992 HRH4Q9H3N8 390 aa11.02□□□□□ -0.65
RHBDD1-209ENST00000448992 COPZ2Q9P299 210 aa11.02□□□□□ -0.65
RHBDD1-209ENST00000448992 KMT2AQ03164 3969 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms