RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 APOHP02749 345 aaPredicted RBP11.38□□□□□ -0.59
TRA2A-203ENST00000448549 S100GP29377 79 aa11.38□□□□□ -0.59
TRA2A-203ENST00000448549 HSPE1P61604 102 aaKnown RBP11.38□□□□□ -0.59
TRA2A-203ENST00000448549 LSM3P62310 102 aaKnown RBP11.38□□□□□ -0.59
TRA2A-203ENST00000448549 PAFAH1B2P68402 229 aa11.38□□□□□ -0.59
TRA2A-203ENST00000448549 PRCDQ00LT1 54 aa11.38□□□□□ -0.59
TRA2A-203ENST00000448549 LPCAT3Q6P1A2 487 aa11.38□□□□□ -0.59
TRA2A-203ENST00000448549 TOMM20LQ6UXN7 152 aa11.38□□□□□ -0.59
TRA2A-203ENST00000448549 LILRB2Q8N423 598 aa11.38□□□□□ -0.59
TRA2A-203ENST00000448549 ZNF114Q8NC26 417 aa11.38□□□□□ -0.59
TRA2A-203ENST00000448549 MRGPRFQ96AM1 343 aa11.38□□□□□ -0.59
TRA2A-203ENST00000448549 FAM212BQ9NTI7 297 aaPredicted RBP11.38□□□□□ -0.59
TRA2A-203ENST00000448549 FRAS1Q86XX4 4008 aa11.37□□□□□ -0.59
TRA2A-203ENST00000448549 IGHV3-66A0A0C4DH42 116 aa11.37□□□□□ -0.59
TRA2A-203ENST00000448549 DEFB4AO15263 64 aa11.37□□□□□ -0.59
TRA2A-203ENST00000448549 CA1P00915 261 aaPredicted RBP11.37□□□□□ -0.59
TRA2A-203ENST00000448549 IFNA4P05014 189 aa11.37□□□□□ -0.59
TRA2A-203ENST00000448549 EIF4EP06730 217 aaKnown RBP11.37□□□□□ -0.59
TRA2A-203ENST00000448549 RBMS2Q15434 407 aaKnown RBP11.37□□□□□ -0.59
TRA2A-203ENST00000448549 KCTD21Q4G0X4 260 aa11.37□□□□□ -0.59
TRA2A-203ENST00000448549 SPINK9Q5DT21 86 aa11.37□□□□□ -0.59
TRA2A-203ENST00000448549 GPX8Q8TED1 209 aa11.37□□□□□ -0.59
TRA2A-203ENST00000448549 ST8SIA2Q92186 375 aa11.37□□□□□ -0.59
TRA2A-203ENST00000448549 GINS3Q9BRX5 216 aa11.37□□□□□ -0.59
TRA2A-203ENST00000448549 MFFQ9GZY8 342 aa11.37□□□□□ -0.59
TRA2A-203ENST00000448549 C11orf68Q9H3H3 251 aaKnown RBP11.37□□□□□ -0.59
TRA2A-203ENST00000448549 KMT2AQ03164 3969 aa11.36□□□□□ -0.59
TRA2A-203ENST00000448549 ST8SIA3O43173 380 aa11.36□□□□□ -0.59
TRA2A-203ENST00000448549 DFFBO76075 338 aa11.36□□□□□ -0.59
TRA2A-203ENST00000448549 RPL11P62913 178 aaKnown RBP11.36□□□□□ -0.59
TRA2A-203ENST00000448549 ERHP84090 104 aaKnown RBP11.36□□□□□ -0.59
TRA2A-203ENST00000448549 IZUMO4Q1ZYL8 232 aa11.36□□□□□ -0.59
TRA2A-203ENST00000448549 LEMD1Q68G75 181 aa11.36□□□□□ -0.59
TRA2A-203ENST00000448549 MS4A6AQ9H2W1 248 aa11.36□□□□□ -0.59
TRA2A-203ENST00000448549 VSIRQ9H7M9 311 aa11.36□□□□□ -0.59
TRA2A-203ENST00000448549 DNASE2O00115 360 aaPredicted RBP11.35□□□□□ -0.59
TRA2A-203ENST00000448549 CD5P06127 495 aa11.35□□□□□ -0.59
TRA2A-203ENST00000448549 NPBWR1P48145 328 aa11.35□□□□□ -0.59
TRA2A-203ENST00000448549 UCP3P55916 312 aa11.35□□□□□ -0.59
TRA2A-203ENST00000448549 DEFB131AP59861 70 aa11.35□□□□□ -0.59
TRA2A-203ENST00000448549 TMEM187Q14656 261 aa11.35□□□□□ -0.59
TRA2A-203ENST00000448549 SNX29P2Q8IUI4 249 aa11.35□□□□□ -0.59
TRA2A-203ENST00000448549 FAM24BQ8N5W8 94 aa11.35□□□□□ -0.59
TRA2A-203ENST00000448549 DUSP18Q8NEJ0 188 aa11.35□□□□□ -0.59
TRA2A-203ENST00000448549 YIPF6Q96EC8 236 aa11.35□□□□□ -0.59
TRA2A-203ENST00000448549 COMMD3Q9UBI1 195 aa11.35□□□□□ -0.59
TRA2A-203ENST00000448549 PUS1Q9Y606 427 aaKnown RBP eCLIP11.35□□□□□ -0.59
TRA2A-203ENST00000448549 SMIM31A0A1B0GVY4 71 aa11.34□□□□□ -0.59
TRA2A-203ENST00000448549 PRR20EP86478 221 aa11.34□□□□□ -0.59
TRA2A-203ENST00000448549 PRR20CP86479 221 aa11.34□□□□□ -0.59
TRA2A-203ENST00000448549 PRR20DP86480 221 aa11.34□□□□□ -0.59
TRA2A-203ENST00000448549 PRR20BP86481 221 aa11.34□□□□□ -0.59
TRA2A-203ENST00000448549 PRR20AP86496 221 aa11.34□□□□□ -0.59
TRA2A-203ENST00000448549 C2CD4CQ8TF44 421 aa11.34□□□□□ -0.59
TRA2A-203ENST00000448549 ZFAND3Q9H8U3 227 aa11.34□□□□□ -0.59
TRA2A-203ENST00000448549 SCPEP1Q9HB40 452 aa11.34□□□□□ -0.59
TRA2A-203ENST00000448549 A0A1B0GU03 582 aa11.33□□□□□ -0.6
TRA2A-203ENST00000448549 TMEM50AO95807 157 aa11.33□□□□□ -0.6
TRA2A-203ENST00000448549 IGKV1-5P01602 117 aa11.33□□□□□ -0.6
TRA2A-203ENST00000448549 RCVRNP35243 200 aa11.33□□□□□ -0.6
TRA2A-203ENST00000448549 SNCAP37840 140 aa11.33□□□□□ -0.6
TRA2A-203ENST00000448549 ZNF600Q6ZNG1 722 aa11.33□□□□□ -0.6
TRA2A-203ENST00000448549 RABAC1Q9UI14 185 aa11.33□□□□□ -0.6
TRA2A-203ENST00000448549 TRAV2A0A0B4J234 112 aa11.32□□□□□ -0.6
TRA2A-203ENST00000448549 A0A0B4J293 547 aa11.32□□□□□ -0.6
TRA2A-203ENST00000448549 M0QYG6 137 aa11.32□□□□□ -0.6
TRA2A-203ENST00000448549 APOA1P02647 267 aa11.32□□□□□ -0.6
TRA2A-203ENST00000448549 PGAM2P15259 253 aa11.32□□□□□ -0.6
TRA2A-203ENST00000448549 PI3P19957 117 aa11.32□□□□□ -0.6
TRA2A-203ENST00000448549 SLC35G3Q8N808 338 aa11.32□□□□□ -0.6
TRA2A-203ENST00000448549 IFNA17P01571 189 aa11.31□□□□□ -0.6
TRA2A-203ENST00000448549 ELK1P19419 428 aa11.31□□□□□ -0.6
TRA2A-203ENST00000448549 NPPCP23582 126 aa11.31□□□□□ -0.6
TRA2A-203ENST00000448549 ETV6P41212 452 aa11.31□□□□□ -0.6
TRA2A-203ENST00000448549 PVRIGQ6DKI7 326 aa11.31□□□□□ -0.6
TRA2A-203ENST00000448549 STHQ8IWL8 128 aa11.31□□□□□ -0.6
TRA2A-203ENST00000448549 TP53RKQ96S44 253 aa11.31□□□□□ -0.6
TRA2A-203ENST00000448549 TMEM231Q9H6L2 316 aa11.31□□□□□ -0.6
TRA2A-203ENST00000448549 MRPL36Q9P0J6 103 aaKnown RBP11.31□□□□□ -0.6
TRA2A-203ENST00000448549 IGLL5B9A064 214 aa11.3□□□□□ -0.6
TRA2A-203ENST00000448549 INS-IGF2F8WCM5 200 aa11.3□□□□□ -0.6
TRA2A-203ENST00000448549 HPGDSO60760 199 aa11.3□□□□□ -0.6
TRA2A-203ENST00000448549 GIG44P09565 113 aaPredicted RBP11.3□□□□□ -0.6
TRA2A-203ENST00000448549 P0C879 139 aa11.3□□□□□ -0.6
TRA2A-203ENST00000448549 RNASE2P10153 161 aaKnown RBP11.3□□□□□ -0.6
TRA2A-203ENST00000448549 AKR1C2P52895 323 aa11.3□□□□□ -0.6
TRA2A-203ENST00000448549 PIGPP57054 158 aa11.3□□□□□ -0.6
TRA2A-203ENST00000448549 TCTAP57738 103 aa11.3□□□□□ -0.6
TRA2A-203ENST00000448549 NCS1P62166 190 aa11.3□□□□□ -0.6
TRA2A-203ENST00000448549 MLANAQ16655 118 aa11.3□□□□□ -0.6
TRA2A-203ENST00000448549 Q8NAQ8 132 aa11.3□□□□□ -0.6
TRA2A-203ENST00000448549 STXBP6Q8NFX7 210 aa11.3□□□□□ -0.6
TRA2A-203ENST00000448549 IGHV4-28A0A0C4DH34 117 aa11.29□□□□□ -0.6
TRA2A-203ENST00000448549 A0A1W2PS18 150 aa11.29□□□□□ -0.6
TRA2A-203ENST00000448549 RBMY1A1P0DJD3 496 aaKnown RBP11.29□□□□□ -0.6
TRA2A-203ENST00000448549 RBMY1CP0DJD4 496 aa11.29□□□□□ -0.6
TRA2A-203ENST00000448549 HOXA1P49639 335 aaPredicted RBP11.29□□□□□ -0.6
TRA2A-203ENST00000448549 PPP5CP53041 499 aa11.29□□□□□ -0.6
TRA2A-203ENST00000448549 SUB1P53999 127 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRA2A-203ENST00000448549 RND3P61587 244 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms