RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 OR1P1Q8NH06 330 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 NARS2Q96I59 477 aaKnown RBP5.52□□□□□ -1.53
RFC4-209ENST00000448497 AJUBAQ96IF1 538 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 SLC35E1Q96K37 410 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 P2RX4Q99571 388 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 MGST2Q99735 147 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 HINT2Q9BX68 163 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 ACTR3CQ9C0K3 210 aaPredicted RBP5.52□□□□□ -1.53
RFC4-209ENST00000448497 MAP1LC3BQ9GZQ8 125 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 NARFLQ9H6Q4 476 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 VSIRQ9H7M9 311 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 SLC39A9Q9NUM3 307 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 METTL1Q9UBP6 276 aaKnown RBP5.52□□□□□ -1.53
RFC4-209ENST00000448497 SLC45A2Q9UMX9 530 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 FAM96BQ9Y3D0 163 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 COL12A1Q99715 3063 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.52□□□□□ -1.534e-11■■■■■ 41.7
RFC4-209ENST00000448497 FAM208BQ5VWN6 2430 aa5.52□□□□□ -1.53
RFC4-209ENST00000448497 MED13LQ71F56 2210 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 IGHV3-72A0A0B4J1Y9 119 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 LOC102723971A0A1B0GUV8 181 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 TEX22C9J3V5 150 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 C9JQL5 133 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 F8W036 122 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 ACTL6BO94805 426 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 YIF1AO95070 293 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 IFNA1P01562 189 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 SRP19P09132 144 aaKnown RBP5.51□□□□□ -1.53
RFC4-209ENST00000448497 OR13C7P0DN81 318 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 BCL2P10415 239 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 SLC25A16P16260 332 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 GATA3P23771 443 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 PSMB3P49720 205 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 SSBP2P81877 361 aaPredicted RBP5.51□□□□□ -1.53
RFC4-209ENST00000448497 AKR1C1Q04828 323 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 KLRD1Q13241 179 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 GAMTQ14353 236 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 C5orf64Q2M2E5 130 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 KLK9Q2XQG4 91 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 RBMS3Q6XE24 437 aaKnown RBP5.51□□□□□ -1.53
RFC4-209ENST00000448497 LHFPL4Q7Z7J7 247 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 THAP8Q8NA92 274 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 OR1L6Q8NGR2 347 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 SUN5Q8TC36 379 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 TXNDC17Q9BRA2 123 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 EIF5A2Q9GZV4 153 aaKnown RBP5.51□□□□□ -1.53
RFC4-209ENST00000448497 MANBALQ9NQG1 85 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 KLK9Q9UKQ9 250 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 PXMP4Q9Y6I8 212 aa5.51□□□□□ -1.53
RFC4-209ENST00000448497 SPG11Q96JI7 2443 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 ANKRD17O75179 2603 aaKnown RBP5.5□□□□□ -1.53
RFC4-209ENST00000448497 IGHV4-61A0A0C4DH41 118 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 SMCO3A2RU48 225 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 NPFFO15130 113 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 OPN1MWP04001 364 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 LINC00869P0C866 280 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 OPN1MW2P0DN77 364 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 OPN1MW3P0DN78 364 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 CNTFRP26992 372 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 BRS3P32247 399 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 CDC34P49427 236 aaPredicted RBP5.5□□□□□ -1.53
RFC4-209ENST00000448497 ELLP55199 621 aaPredicted RBP5.5□□□□□ -1.53
RFC4-209ENST00000448497 B2MP61769 119 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 SELENOTP62341 195 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 ICAM4Q14773 271 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 MMDQ15546 238 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 TNXAQ16473 311 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 C10orf55Q5SWW7 151 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 ZNF562Q6V9R5 426 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 SSX7Q7RTT5 188 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 SLC16A13Q7RTY0 426 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 LRRC75A-AS1Q8N1F1 130 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 DYNAPQ8N1N2 210 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 TMEM116Q8NCL8 245 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 SRSF12Q8WXF0 261 aaKnown RBP5.5□□□□□ -1.53
RFC4-209ENST00000448497 RAB24Q969Q5 203 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 NKX6-2Q9C056 277 aaPredicted RBP5.5□□□□□ -1.53
RFC4-209ENST00000448497 FBXL15Q9H469 300 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 FNDC4Q9H6D8 234 aaPredicted RBP5.5□□□□□ -1.53
RFC4-209ENST00000448497 TMEM231Q9H6L2 316 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 BEX4Q9NWD9 120 aaPredicted RBP5.5□□□□□ -1.53
RFC4-209ENST00000448497 C1RLQ9NZP8 487 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 VAX2Q9UIW0 290 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 HILPDAQ9Y5L2 63 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 F11RQ9Y624 299 aaKnown RBP5.5□□□□□ -1.53
RFC4-209ENST00000448497 ARL2-SNX15V9GYD0 113 aa5.5□□□□□ -1.53
RFC4-209ENST00000448497 USP9YO00507 2555 aaPredicted RBP5.49□□□□□ -1.53
RFC4-209ENST00000448497 IGKV1OR2-108A0A075B7D4 117 aa5.49□□□□□ -1.53
RFC4-209ENST00000448497 IGHV4-30-2A0A087WSY4 118 aa5.49□□□□□ -1.53
RFC4-209ENST00000448497 A0A096LNT2 108 aa5.49□□□□□ -1.53
RFC4-209ENST00000448497 TRAV20A0A0B4J274 112 aa5.49□□□□□ -1.53
RFC4-209ENST00000448497 CENPVL3A0A0U1RRI6 287 aa5.49□□□□□ -1.53
RFC4-209ENST00000448497 B4DSR2 109 aa5.49□□□□□ -1.53
RFC4-209ENST00000448497 TMEM250H0YL14 139 aa5.49□□□□□ -1.53
RFC4-209ENST00000448497 CXorf1O96002 111 aa5.49□□□□□ -1.53
RFC4-209ENST00000448497 HLA-DRB1P01911 266 aa5.49□□□□□ -1.53
RFC4-209ENST00000448497 MSMBP08118 114 aa5.49□□□□□ -1.53
RFC4-209ENST00000448497 FBP1P09467 338 aa5.49□□□□□ -1.53
RFC4-209ENST00000448497 OR5G3P0C626 314 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms