RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 IZUMO4Q1ZYL8 232 aa11.35□□□□□ -0.59
SEC13-213ENST00000445064 SPINK9Q5DT21 86 aa11.35□□□□□ -0.59
SEC13-213ENST00000445064 SNX29P2Q8IUI4 249 aa11.35□□□□□ -0.59
SEC13-213ENST00000445064 RPP25LQ8N5L8 163 aaKnown RBP11.35□□□□□ -0.59
SEC13-213ENST00000445064 CMTM3Q96MX0 182 aa11.35□□□□□ -0.59
SEC13-213ENST00000445064 RARRES2Q99969 163 aa11.35□□□□□ -0.59
SEC13-213ENST00000445064 APOHP02749 345 aaPredicted RBP11.34□□□□□ -0.59
SEC13-213ENST00000445064 UCP3P55916 312 aa11.34□□□□□ -0.59
SEC13-213ENST00000445064 ERHP84090 104 aaKnown RBP11.34□□□□□ -0.59
SEC13-213ENST00000445064 TOMM20LQ6UXN7 152 aa11.34□□□□□ -0.59
SEC13-213ENST00000445064 TCF24Q7RTU0 167 aa11.34□□□□□ -0.59
SEC13-213ENST00000445064 LILRB2Q8N423 598 aa11.34□□□□□ -0.59
SEC13-213ENST00000445064 ZNF114Q8NC26 417 aa11.34□□□□□ -0.59
SEC13-213ENST00000445064 IGHV3-66A0A0C4DH42 116 aa11.33□□□□□ -0.6
SEC13-213ENST00000445064 M0QYG6 137 aa11.33□□□□□ -0.6
SEC13-213ENST00000445064 APOA1P02647 267 aa11.33□□□□□ -0.6
SEC13-213ENST00000445064 PAFAH1B2P68402 229 aa11.33□□□□□ -0.6
SEC13-213ENST00000445064 GATAD1Q8WUU5 269 aa11.33□□□□□ -0.6
SEC13-213ENST00000445064 ST8SIA2Q92186 375 aa11.33□□□□□ -0.6
SEC13-213ENST00000445064 SCPEP1Q9HB40 452 aa11.33□□□□□ -0.6
SEC13-213ENST00000445064 A0A087WXM4 84 aa11.32□□□□□ -0.6
SEC13-213ENST00000445064 ST8SIA3O43173 380 aa11.32□□□□□ -0.6
SEC13-213ENST00000445064 DEDDO75618 318 aa11.32□□□□□ -0.6
SEC13-213ENST00000445064 ELK1P19419 428 aa11.32□□□□□ -0.6
SEC13-213ENST00000445064 PI3P19957 117 aa11.32□□□□□ -0.6
SEC13-213ENST00000445064 RCVRNP35243 200 aa11.32□□□□□ -0.6
SEC13-213ENST00000445064 NANOS2P60321 138 aaKnown RBP11.32□□□□□ -0.6
SEC13-213ENST00000445064 NCS1P62166 190 aa11.32□□□□□ -0.6
SEC13-213ENST00000445064 DUSP18Q8NEJ0 188 aa11.32□□□□□ -0.6
SEC13-213ENST00000445064 OR11H2Q8NH07 326 aa11.32□□□□□ -0.6
SEC13-213ENST00000445064 GINS3Q9BRX5 216 aa11.32□□□□□ -0.6
SEC13-213ENST00000445064 DNASE2O00115 360 aaPredicted RBP11.31□□□□□ -0.6
SEC13-213ENST00000445064 HPGDSO60760 199 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 DFFBO76075 338 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 TMEM50AO95807 157 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 IGKV1-5P01602 117 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 PGAM2P15259 253 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 SNCAP37840 140 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 NPBWR1P48145 328 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 DEFB131AP59861 70 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 VBP1P61758 197 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 RPL11P62913 178 aaKnown RBP11.31□□□□□ -0.6
SEC13-213ENST00000445064 RNASE12Q5GAN4 147 aaKnown RBP11.31□□□□□ -0.6
SEC13-213ENST00000445064 LEMD1Q68G75 181 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 C11orf45Q8TAV5 145 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 MS4A6AQ9H2W1 248 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 VSIRQ9H7M9 311 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 VCX3AQ9NNX9 186 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 FBXL17Q9UF56 701 aa11.31□□□□□ -0.6
SEC13-213ENST00000445064 PUS1Q9Y606 427 aaKnown RBP eCLIP11.31□□□□□ -0.6
SEC13-213ENST00000445064 A0A0B4J293 547 aa11.3□□□□□ -0.6
SEC13-213ENST00000445064 A0A1B0GU03 582 aa11.3□□□□□ -0.6
SEC13-213ENST00000445064 DEFB4AO15263 64 aa11.3□□□□□ -0.6
SEC13-213ENST00000445064 CA1P00915 261 aaPredicted RBP11.3□□□□□ -0.6
SEC13-213ENST00000445064 MLANAQ16655 118 aa11.3□□□□□ -0.6
SEC13-213ENST00000445064 LGALS9CQ6DKI2 356 aa11.3□□□□□ -0.6
SEC13-213ENST00000445064 ZNF600Q6ZNG1 722 aa11.3□□□□□ -0.6
SEC13-213ENST00000445064 FAM24BQ8N5W8 94 aa11.3□□□□□ -0.6
SEC13-213ENST00000445064 TP53RKQ96S44 253 aa11.3□□□□□ -0.6
SEC13-213ENST00000445064 FUNDC2Q9BWH2 189 aa11.3□□□□□ -0.6
SEC13-213ENST00000445064 ZFAND3Q9H8U3 227 aa11.3□□□□□ -0.6
SEC13-213ENST00000445064 IFNA17P01571 189 aa11.29□□□□□ -0.6
SEC13-213ENST00000445064 IFNA4P05014 189 aa11.29□□□□□ -0.6
SEC13-213ENST00000445064 CD5P06127 495 aa11.29□□□□□ -0.6
SEC13-213ENST00000445064 ETV6P41212 452 aa11.29□□□□□ -0.6
SEC13-213ENST00000445064 PIGPP57054 158 aa11.29□□□□□ -0.6
SEC13-213ENST00000445064 RBMS2Q15434 407 aaKnown RBP11.29□□□□□ -0.6
SEC13-213ENST00000445064 SLC35G3Q8N808 338 aa11.29□□□□□ -0.6
SEC13-213ENST00000445064 KLK11Q9UBX7 282 aa11.29□□□□□ -0.6
SEC13-213ENST00000445064 C3orf85A0A1B0GTC6 90 aa11.28□□□□□ -0.6
SEC13-213ENST00000445064 FAM25AB3EWG3 89 aa11.28□□□□□ -0.6
SEC13-213ENST00000445064 FAM25CB3EWG5 89 aa11.28□□□□□ -0.6
SEC13-213ENST00000445064 FAM25GB3EWG6 89 aa11.28□□□□□ -0.6
SEC13-213ENST00000445064 P0C879 139 aa11.28□□□□□ -0.6
SEC13-213ENST00000445064 RNASE2P10153 161 aaKnown RBP11.28□□□□□ -0.6
SEC13-213ENST00000445064 NPPCP23582 126 aa11.28□□□□□ -0.6
SEC13-213ENST00000445064 AKR1C2P52895 323 aa11.28□□□□□ -0.6
SEC13-213ENST00000445064 RND3P61587 244 aa11.28□□□□□ -0.6
SEC13-213ENST00000445064 TMEM187Q14656 261 aa11.28□□□□□ -0.6
SEC13-213ENST00000445064 SP6Q3SY56 376 aa11.28□□□□□ -0.6
SEC13-213ENST00000445064 LHFPL1Q86WI0 220 aa11.28□□□□□ -0.6
SEC13-213ENST00000445064 ZNF486Q96H40 463 aaPredicted RBP11.28□□□□□ -0.6
SEC13-213ENST00000445064 MFFQ9GZY8 342 aa11.28□□□□□ -0.6
SEC13-213ENST00000445064 C11orf68Q9H3H3 251 aaKnown RBP11.28□□□□□ -0.6
SEC13-213ENST00000445064 MRPL36Q9P0J6 103 aaKnown RBP11.28□□□□□ -0.6
SEC13-213ENST00000445064 RABAC1Q9UI14 185 aa11.28□□□□□ -0.6
SEC13-213ENST00000445064 INS-IGF2F8WCM5 200 aa11.27□□□□□ -0.61
SEC13-213ENST00000445064 TNFAIP8O95379 198 aa11.27□□□□□ -0.61
SEC13-213ENST00000445064 CD3DP04234 171 aa11.27□□□□□ -0.61
SEC13-213ENST00000445064 RORCP51449 518 aa11.27□□□□□ -0.61
SEC13-213ENST00000445064 SUB1P53999 127 aaKnown RBP eCLIP11.27□□□□□ -0.61
SEC13-213ENST00000445064 RNASE10Q5GAN6 216 aaKnown RBP11.27□□□□□ -0.61
SEC13-213ENST00000445064 PVRIGQ6DKI7 326 aa11.27□□□□□ -0.61
SEC13-213ENST00000445064 OR52I2Q8NH67 350 aa11.27□□□□□ -0.61
SEC13-213ENST00000445064 PDCD10Q9BUL8 212 aa11.27□□□□□ -0.61
SEC13-213ENST00000445064 FNDC4Q9H6D8 234 aaPredicted RBP11.27□□□□□ -0.61
SEC13-213ENST00000445064 A0A0G2JRQ6 117 aa11.26□□□□□ -0.61
SEC13-213ENST00000445064 HOXA1P49639 335 aaPredicted RBP11.26□□□□□ -0.61
SEC13-213ENST00000445064 PPP5CP53041 499 aa11.26□□□□□ -0.61
SEC13-213ENST00000445064 TRIM16LQ309B1 348 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms