RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 TRBV6-6A0A0A6YYG2 114 aa9.62□□□□□ -0.87
HCFC1-203ENST00000444191 C21orf140B9A014 251 aa9.62□□□□□ -0.87
HCFC1-203ENST00000444191 RAB7AP51149 207 aa9.62□□□□□ -0.87
HCFC1-203ENST00000444191 LOC400499M0QZD8 3231 aa9.61□□□□□ -0.87
HCFC1-203ENST00000444191 TMSB15BA0A087X1C1 80 aa9.61□□□□□ -0.87
HCFC1-203ENST00000444191 C1orf194Q5T5A4 169 aa9.61□□□□□ -0.87
HCFC1-203ENST00000444191 ASCL2Q99929 193 aa9.61□□□□□ -0.87
HCFC1-203ENST00000444191 SERTM2A0A1B0GWG4 89 aa9.61□□□□□ -0.87
HCFC1-203ENST00000444191 IGKV1-16P04430 117 aa9.61□□□□□ -0.87
HCFC1-203ENST00000444191 CCL3L1P16619 93 aa9.61□□□□□ -0.87
HCFC1-203ENST00000444191 COL5A1-AS1Q5SY13 56 aa9.61□□□□□ -0.87
HCFC1-203ENST00000444191 DPRXA6NFQ7 191 aa9.61□□□□□ -0.87
HCFC1-203ENST00000444191 M0QZK8 103 aa9.61□□□□□ -0.87
HCFC1-203ENST00000444191 RPL8P62917 257 aaKnown RBP9.61□□□□□ -0.87
HCFC1-203ENST00000444191 SAP30LQ9HAJ7 183 aa9.61□□□□□ -0.87
HCFC1-203ENST00000444191 AMMECR1Q9Y4X0 333 aaPredicted RBP9.61□□□□□ -0.87
HCFC1-203ENST00000444191 KIAA1549Q9HCM3 1950 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 IGHV2OR16-5A0A0B4J2B6 119 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 SLC25A17O43808 307 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 RELBQ01201 579 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 KRTAP27-1Q3LI81 207 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 ANKRD39Q53RE8 183 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 RNASE8Q8TDE3 154 aaKnown RBP9.6□□□□□ -0.87
HCFC1-203ENST00000444191 RNASEH2CQ8TDP1 164 aaKnown RBP9.6□□□□□ -0.87
HCFC1-203ENST00000444191 DMDP11532 3685 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 MUC21A0A0G2JKD1 596 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 MUC21A0A140T8X8 626 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 CNIH1O95406 144 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 RBP4P02753 201 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 DLX1P56177 255 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 ERVK11-1P61568 191 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 SPRNQ5BIV9 151 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 MUC21Q5SSG8 566 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 VPS25Q9BRG1 176 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 PAXXQ9BUH6 204 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 S4R3C0 116 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 EXPH5Q8NEV8 1989 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 IGKV1D-17A0A075B6S4 117 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 PGPA6NDG6 321 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 BRWD1-AS2P59051 145 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 ACSF3Q4G176 576 aaPredicted RBP9.6□□□□□ -0.87
HCFC1-203ENST00000444191 C10orf113Q5VZT2 155 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 WDR73Q6P4I2 378 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 SSX8Q7RTT4 187 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 KLHDC1Q8N7A1 406 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 TCTEX1D1Q8N7M0 179 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 OR4C5Q8NGB2 326 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 PGLYRP4Q96LB8 373 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 MIEN1Q9BRT3 115 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 CLEC5AQ9NY25 188 aa9.6□□□□□ -0.87
HCFC1-203ENST00000444191 ATRXP46100 2492 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 TRAV17A0A0B4J275 112 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 COX7A1P24310 79 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 LYZP61626 148 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 FAM27E3Q08E93 113 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 TNXAQ16473 311 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 MAJINQ3KP22 176 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 CT45A1Q5HYN5 189 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 CT45A3Q8NHU0 189 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 OR8B2Q96RD0 313 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 RAB9BQ9NP90 201 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 FBXL7Q9UJT9 491 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 MRPS18CQ9Y3D5 142 aaKnown RBP9.59□□□□□ -0.87
HCFC1-203ENST00000444191 K7EN84 100 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 LINC00614P0C842 121 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 FOXL1Q12952 345 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 TRIP6Q15654 476 aaKnown RBP9.59□□□□□ -0.87
HCFC1-203ENST00000444191 TCF24Q7RTU0 167 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 AP1S3Q96PC3 154 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 RCHY1Q96PM5 261 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 RNF7Q9UBF6 113 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 JPT1Q9UK76 154 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 PRNDQ9UKY0 176 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 WASHC3Q9Y3C0 194 aa9.59□□□□□ -0.87
HCFC1-203ENST00000444191 AHRRA9YTQ3 701 aa9.58□□□□□ -0.88
HCFC1-203ENST00000444191 ACP1P24666 158 aa9.58□□□□□ -0.88
HCFC1-203ENST00000444191 GCSAMQ8N6F7 178 aa9.58□□□□□ -0.88
HCFC1-203ENST00000444191 KMT2EQ8IZD2 1858 aa9.58□□□□□ -0.88
HCFC1-203ENST00000444191 C8orf88P0DMB2 117 aa9.58□□□□□ -0.88
HCFC1-203ENST00000444191 HES1Q14469 280 aa9.58□□□□□ -0.88
HCFC1-203ENST00000444191 PDPNQ86YL7 162 aa9.58□□□□□ -0.88
HCFC1-203ENST00000444191 IGHV1-18A0A0C4DH31 117 aa9.58□□□□□ -0.88
HCFC1-203ENST00000444191 NKX6-3A6NJ46 265 aa9.58□□□□□ -0.88
HCFC1-203ENST00000444191 SH2D7A6NKC9 451 aaPredicted RBP9.58□□□□□ -0.88
HCFC1-203ENST00000444191 PAX1P15863 534 aa9.58□□□□□ -0.88
HCFC1-203ENST00000444191 UNQ5815/PRO19632Q6UWF5 114 aa9.58□□□□□ -0.88
HCFC1-203ENST00000444191 NPIPB11E5RHQ5 1161 aa9.57□□□□□ -0.88
HCFC1-203ENST00000444191 KIR2DL2P43627 348 aaPredicted RBP9.57□□□□□ -0.88
HCFC1-203ENST00000444191 BPIFB3P59826 476 aa9.57□□□□□ -0.88
HCFC1-203ENST00000444191 ZADH2Q8N4Q0 377 aa9.57□□□□□ -0.88
HCFC1-203ENST00000444191 OR1L4Q8NGR5 311 aa9.57□□□□□ -0.88
HCFC1-203ENST00000444191 RNF2Q99496 336 aa9.57□□□□□ -0.88
HCFC1-203ENST00000444191 PYGO2Q9BRQ0 406 aa9.57□□□□□ -0.88
HCFC1-203ENST00000444191 PMS2P5A8MQ11 134 aa9.57□□□□□ -0.88
HCFC1-203ENST00000444191 SAPCD1Q5SSQ6 148 aa9.57□□□□□ -0.88
HCFC1-203ENST00000444191 RPRMLQ8N4K4 120 aa9.57□□□□□ -0.88
HCFC1-203ENST00000444191 ZNF596Q8TC21 504 aa9.57□□□□□ -0.88
HCFC1-203ENST00000444191 GSX1Q9H4S2 264 aaPredicted RBP9.57□□□□□ -0.88
HCFC1-203ENST00000444191 A0A1W2PN81 502 aa9.57□□□□□ -0.88
HCFC1-203ENST00000444191 hADV38S2A0JD32 116 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms