RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 C1orf229Q6ZS94 237 aaPredicted RBP11.58□□□□□ -0.56
LIMD1-202ENST00000440097 OR4S2Q8NH73 311 aa11.58□□□□□ -0.56
LIMD1-202ENST00000440097 HCFC1P51610 2035 aa11.58□□□□□ -0.56
LIMD1-202ENST00000440097 P0C879 139 aa11.58□□□□□ -0.56
LIMD1-202ENST00000440097 DERL1Q9BUN8 251 aa11.58□□□□□ -0.56
LIMD1-202ENST00000440097 LRRK2Q5S007 2527 aa11.58□□□□□ -0.56
LIMD1-202ENST00000440097 CDKN1AP38936 164 aa11.57□□□□□ -0.56
LIMD1-202ENST00000440097 GNB1P62873 340 aa11.57□□□□□ -0.56
LIMD1-202ENST00000440097 OR5I1Q13606 314 aa11.57□□□□□ -0.56
LIMD1-202ENST00000440097 ZNF114Q8NC26 417 aa11.57□□□□□ -0.56
LIMD1-202ENST00000440097 SGMS2Q8NHU3 365 aa11.57□□□□□ -0.56
LIMD1-202ENST00000440097 CIB3Q96Q77 187 aaPredicted RBP11.57□□□□□ -0.56
LIMD1-202ENST00000440097 PATZ1Q9HBE1 687 aaKnown RBP11.57□□□□□ -0.56
LIMD1-202ENST00000440097 RPUSD1Q9UJJ7 312 aaKnown RBP11.57□□□□□ -0.56
LIMD1-202ENST00000440097 TP53TG3Q9ULZ0 132 aa11.57□□□□□ -0.56
LIMD1-202ENST00000440097 CHD6Q8TD26 2715 aa11.57□□□□□ -0.56
LIMD1-202ENST00000440097 IL6RP08887 468 aaPredicted RBP11.57□□□□□ -0.56
LIMD1-202ENST00000440097 TFPI2P48307 235 aa11.57□□□□□ -0.56
LIMD1-202ENST00000440097 UBE2G2P60604 165 aa11.57□□□□□ -0.56
LIMD1-202ENST00000440097 FBXL19-AS1Q494R0 122 aa11.57□□□□□ -0.56
LIMD1-202ENST00000440097 TMEM200BQ69YZ2 307 aa11.57□□□□□ -0.56
LIMD1-202ENST00000440097 CD99P14209 185 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 ATP5G3P48201 142 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 LINC00310P59036 64 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 TPPP2P59282 170 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 FOXL1Q12952 345 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 TMEM183BQ1AE95 376 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 OR10P1Q8NGE3 313 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 VN1R17PQ8TDU5 208 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 FAM216AQ8WUB2 273 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 HSPB9Q9BQS6 159 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 TMEM147Q9BVK8 224 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 TMEM140Q9NV12 185 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 MED13LQ71F56 2210 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 PRSS47A8MTI9 375 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 SIAH2O43255 324 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 NDUFB4O95168 129 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 KIR2DS2P43631 304 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 THBS3P49746 956 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 CORO2AQ92828 525 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 BTF3L4Q96K17 158 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 VAMP8Q9BV40 100 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 HEYLQ9NQ87 328 aaPredicted RBP11.56□□□□□ -0.56
LIMD1-202ENST00000440097 TRAV3A0A0B4J244 114 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 MEF2CQ06413 473 aaPredicted RBP11.56□□□□□ -0.56
LIMD1-202ENST00000440097 EFNB3Q15768 340 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 HINT2Q9BX68 163 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 NPCDR1Q9BY65 106 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 CTSZQ9UBR2 303 aa11.56□□□□□ -0.56
LIMD1-202ENST00000440097 RBFOX2O43251 390 aaKnown RBP eCLIP11.55□□□□□ -0.56
LIMD1-202ENST00000440097 SERF1AO75920 110 aa11.55□□□□□ -0.56
LIMD1-202ENST00000440097 REG1BP48304 166 aa11.55□□□□□ -0.56
LIMD1-202ENST00000440097 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.55□□□□□ -0.56
LIMD1-202ENST00000440097 SFRP2Q96HF1 295 aa11.55□□□□□ -0.56
LIMD1-202ENST00000440097 USP9XQ93008 2570 aaPredicted RBP11.55□□□□□ -0.56
LIMD1-202ENST00000440097 ITGB1BP1O14713 200 aa11.55□□□□□ -0.56
LIMD1-202ENST00000440097 TCF21O43680 179 aa11.55□□□□□ -0.56
LIMD1-202ENST00000440097 PAFAH1B2P68402 229 aa11.55□□□□□ -0.56
LIMD1-202ENST00000440097 SLC25A48Q6ZT89 311 aaKnown RBP11.55□□□□□ -0.56
LIMD1-202ENST00000440097 ZNF439Q8NDP4 499 aa11.55□□□□□ -0.56
LIMD1-202ENST00000440097 OR10X1Q8NGY0 326 aa11.55□□□□□ -0.56
LIMD1-202ENST00000440097 FCN3O75636 299 aa11.54□□□□□ -0.56
LIMD1-202ENST00000440097 HNF1AP20823 631 aa11.54□□□□□ -0.56
LIMD1-202ENST00000440097 CBLN1P23435 193 aa11.54□□□□□ -0.56
LIMD1-202ENST00000440097 CDC34P49427 236 aaPredicted RBP11.54□□□□□ -0.56
LIMD1-202ENST00000440097 YPEL3P61236 119 aaPredicted RBP11.54□□□□□ -0.56
LIMD1-202ENST00000440097 RANP62826 216 aaKnown RBP11.54□□□□□ -0.56
LIMD1-202ENST00000440097 ATP6V1FQ16864 119 aa11.54□□□□□ -0.56
LIMD1-202ENST00000440097 ZNF672Q499Z4 452 aaPredicted RBP11.54□□□□□ -0.56
LIMD1-202ENST00000440097 ZNF709Q8N972 641 aa11.54□□□□□ -0.56
LIMD1-202ENST00000440097 ADTRPQ96IZ2 230 aa11.54□□□□□ -0.56
LIMD1-202ENST00000440097 MDFIC2A0A1B0GVS7 189 aa11.54□□□□□ -0.56
LIMD1-202ENST00000440097 PDE6DO43924 150 aa11.54□□□□□ -0.56
LIMD1-202ENST00000440097 RTL8BQ17RB0 113 aa11.54□□□□□ -0.56
LIMD1-202ENST00000440097 DDB2Q92466 427 aa11.54□□□□□ -0.56
LIMD1-202ENST00000440097 SLC35D1Q9NTN3 355 aa11.54□□□□□ -0.56
LIMD1-202ENST00000440097 PMS2P5A8MQ11 134 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 F6UZH7 168 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 COL8A2P25067 703 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 SELENOTP62341 195 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 TMEM30BQ3MIR4 351 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 OR4A47Q6IF82 309 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 C11orf42Q8N5U0 333 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 F2Z2F3 143 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 LY6HO94772 140 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 IGKV1-16P04430 117 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 CRISP2P16562 243 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 GCSAMLQ5JQS6 135 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 COL5A1-AS1Q5SY13 56 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 LINC00574Q9H8X3 128 aa11.53□□□□□ -0.56
LIMD1-202ENST00000440097 TRBV20OR9-2A0A075B6H5 130 aa11.52□□□□□ -0.56
LIMD1-202ENST00000440097 PRB1P04280 392 aa11.52□□□□□ -0.56
LIMD1-202ENST00000440097 COMPP49747 757 aaPredicted RBP11.52□□□□□ -0.56
LIMD1-202ENST00000440097 OR5AU1Q8NGC0 362 aa11.52□□□□□ -0.56
LIMD1-202ENST00000440097 PRORYQ9H606 182 aa11.52□□□□□ -0.56
LIMD1-202ENST00000440097 DNAJC4Q9NNZ3 241 aa11.52□□□□□ -0.56
LIMD1-202ENST00000440097 CT45A6P0DMU7 189 aa11.52□□□□□ -0.57
LIMD1-202ENST00000440097 CT45A5P0DMU8 189 aa11.52□□□□□ -0.57
LIMD1-202ENST00000440097 CT45A7P0DMV0 189 aa11.52□□□□□ -0.57
LIMD1-202ENST00000440097 RELBQ01201 579 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms