RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 ZNF546Q86UE3 836 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 PRIMA1Q86XR5 153 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 LURAP1LQ8IV03 231 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 TMEM252Q8N6L7 170 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 KLHDC1Q8N7A1 406 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.91□□□□□ -0.82
SCLT1-202ENST00000439369 OR4X2Q8NGF9 303 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 VN1R17PQ8TDU5 208 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 TMEM170AQ8WVE7 144 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 CACNG8Q8WXS5 425 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 USMG5Q96IX5 58 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 AQP10Q96PS8 301 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 GGACTQ9BVM4 153 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 PLXNB1O43157 2135 aa9.91□□□□□ -0.82
SCLT1-202ENST00000439369 A0A0G2JLM5 398 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 H3BP45 60 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 IFNA4P05014 189 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 PF4V1P10720 104 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 GPX4P36969 197 aaPredicted RBP9.9□□□□□ -0.82
SCLT1-202ENST00000439369 MFAP2P55001 183 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 HBG1P69891 147 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 HBG2P69892 147 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 ETV3LQ6ZN32 361 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 INO80EQ8NBZ0 244 aaPredicted RBP9.9□□□□□ -0.82
SCLT1-202ENST00000439369 OR5AU1Q8NGC0 362 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 OR10P1Q8NGE3 313 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 MYOZ3Q8TDC0 251 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 PINX1Q96BK5 328 aaKnown RBP9.9□□□□□ -0.82
SCLT1-202ENST00000439369 CXorf58Q96LI9 332 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 HYLS1Q96M11 299 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 ZNF355PQ9NSJ1 428 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 TNFSF18Q9UNG2 199 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 DMRT1Q9Y5R6 373 aa9.9□□□□□ -0.82
SCLT1-202ENST00000439369 TEP1Q99973 2627 aaKnown RBP9.89□□□□□ -0.83
SCLT1-202ENST00000439369 FXYD6-FXYD2A0A087WZ82 144 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 IGSF23A1L1A6 192 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 FAM24AA6NFZ4 105 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 PMS2P5A8MQ11 134 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 PRSS46E5RG02 174 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 TRGV3P03979 118 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 METTL15P1P0C7V9 234 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 MDKP21741 143 aaPredicted RBP9.89□□□□□ -0.83
SCLT1-202ENST00000439369 RPL12P30050 165 aaKnown RBP9.89□□□□□ -0.83
SCLT1-202ENST00000439369 S100A11P31949 105 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 FCGR2BP31994 310 aaPredicted RBP9.89□□□□□ -0.83
SCLT1-202ENST00000439369 RAB9AP51151 201 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 DLK1P80370 383 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 RHOGP84095 191 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 SRSF2Q01130 221 aaKnown RBP9.89□□□□□ -0.83
SCLT1-202ENST00000439369 EWSR1Q01844 656 aaKnown RBP eCLIP9.89□□□□□ -0.83
SCLT1-202ENST00000439369 ATP6V1FQ16864 119 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 ZNF329Q86UD4 541 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 TMEM158Q8WZ71 300 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 PPP1R14BQ96C90 147 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 MISP3Q96FF7 219 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 FBXL7Q9UJT9 491 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 HSPB11Q9Y547 144 aa9.89□□□□□ -0.83
SCLT1-202ENST00000439369 I3L2K1 104 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 K7EIM0 57 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 OPRK1P41145 380 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 TPPP2P59282 170 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 ATP5G2Q06055 141 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 CD69Q07108 199 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 OR2F1Q13607 317 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 ZNF345Q14585 488 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 KRTAP24-1Q3LI83 254 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 ZFP69Q49AA0 526 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 C19orf35Q6ZS72 473 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 ACOT7LQ6ZUV0 252 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 UBE2E2Q96LR5 201 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 TXN2Q99757 166 aa9.88□□□□□ -0.83
SCLT1-202ENST00000439369 GAR1Q9NY12 217 aaKnown RBP9.88□□□□□ -0.83
SCLT1-202ENST00000439369 PAIP2BQ9ULR5 123 aaKnown RBP9.88□□□□□ -0.83
SCLT1-202ENST00000439369 TRBV7-1A0A0A6YYK4 115 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 SMLR1H3BR10 107 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 OR2J3O76001 311 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 NDUFB8O95169 186 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 MT-CO2P00403 227 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 PRH1P02810 166 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 SLC38A11Q08AI6 406 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 C15orf32Q32M92 178 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 LCE2DQ5TA82 110 aaPredicted RBP9.87□□□□□ -0.83
SCLT1-202ENST00000439369 OR8G2PQ6IF36 304 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 OR11H4Q8NGC9 324 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 OR1S2Q8NGQ3 325 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 TAF15Q92804 592 aaKnown RBP eCLIP9.87□□□□□ -0.83
SCLT1-202ENST00000439369 EEF1AKMT3Q96AZ1 226 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 MS4A10Q96PG2 267 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 KLK15Q9H2R5 256 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 ZC4H2Q9NQZ6 224 aa9.87□□□□□ -0.83
SCLT1-202ENST00000439369 A0A0D9SG52 128 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 RNF222A6NCQ9 220 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 SCGB2A1O75556 95 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 DFFBO76075 338 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 CST7O76096 145 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 CDX1P47902 265 aaPredicted RBP9.86□□□□□ -0.83
SCLT1-202ENST00000439369 MFAP4P55083 255 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 RIPPLY3P57055 190 aa9.86□□□□□ -0.83
SCLT1-202ENST00000439369 KIAA0141Q14154 515 aaPredicted RBP9.86□□□□□ -0.83
SCLT1-202ENST00000439369 VWC2Q2TAL6 325 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms