RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 PRR20AP86496 221 aa10.88□□□□□ -0.67
PRKDC-203ENST00000432581 PRCDQ00LT1 54 aa10.88□□□□□ -0.67
PRKDC-203ENST00000432581 LPCAT3Q6P1A2 487 aa10.88□□□□□ -0.67
PRKDC-203ENST00000432581 CROCCP3Q8IVE0 287 aa10.88□□□□□ -0.67
PRKDC-203ENST00000432581 OR4A16Q8NH70 328 aa10.88□□□□□ -0.67
PRKDC-203ENST00000432581 Q9H521 79 aa10.88□□□□□ -0.67
PRKDC-203ENST00000432581 IGHV3OR16-13A0A075B7E8 117 aa10.87□□□□□ -0.67
PRKDC-203ENST00000432581 IGHV3-74A0A0B4J1X5 117 aa10.87□□□□□ -0.67
PRKDC-203ENST00000432581 DNASE2O00115 360 aaPredicted RBP10.87□□□□□ -0.67
PRKDC-203ENST00000432581 ST8SIA3O43173 380 aa10.87□□□□□ -0.67
PRKDC-203ENST00000432581 UBE2NLQ5JXB2 153 aa10.87□□□□□ -0.67
PRKDC-203ENST00000432581 TMEM69Q5SWH9 247 aa10.87□□□□□ -0.67
PRKDC-203ENST00000432581 H2BFWTQ7Z2G1 175 aa10.87□□□□□ -0.67
PRKDC-203ENST00000432581 DUSP18Q8NEJ0 188 aa10.87□□□□□ -0.67
PRKDC-203ENST00000432581 PINX1Q96BK5 328 aaKnown RBP10.87□□□□□ -0.67
PRKDC-203ENST00000432581 SEC22AQ96IW7 307 aa10.87□□□□□ -0.67
PRKDC-203ENST00000432581 MS4A6AQ9H2W1 248 aa10.87□□□□□ -0.67
PRKDC-203ENST00000432581 HRH4Q9H3N8 390 aa10.87□□□□□ -0.67
PRKDC-203ENST00000432581 VSIRQ9H7M9 311 aa10.87□□□□□ -0.67
PRKDC-203ENST00000432581 DEFB4AO15263 64 aa10.86□□□□□ -0.67
PRKDC-203ENST00000432581 NPBWR1P48145 328 aa10.86□□□□□ -0.67
PRKDC-203ENST00000432581 TAS2R20P59543 309 aa10.86□□□□□ -0.67
PRKDC-203ENST00000432581 DEFB131AP59861 70 aa10.86□□□□□ -0.67
PRKDC-203ENST00000432581 ERHP84090 104 aaKnown RBP10.86□□□□□ -0.67
PRKDC-203ENST00000432581 PHLDA2Q53GA4 152 aa10.86□□□□□ -0.67
PRKDC-203ENST00000432581 TMEM41BQ5BJD5 291 aa10.86□□□□□ -0.67
PRKDC-203ENST00000432581 TOMM20LQ6UXN7 152 aa10.86□□□□□ -0.67
PRKDC-203ENST00000432581 STHQ8IWL8 128 aa10.86□□□□□ -0.67
PRKDC-203ENST00000432581 ST8SIA2Q92186 375 aa10.86□□□□□ -0.67
PRKDC-203ENST00000432581 TMEM231Q9H6L2 316 aa10.86□□□□□ -0.67
PRKDC-203ENST00000432581 IGLL5B9A064 214 aa10.85□□□□□ -0.67
PRKDC-203ENST00000432581 IGHV3-48P01763 117 aa10.85□□□□□ -0.67
PRKDC-203ENST00000432581 PRSS3P35030 304 aa10.85□□□□□ -0.67
PRKDC-203ENST00000432581 HRH1P35367 487 aa10.85□□□□□ -0.67
PRKDC-203ENST00000432581 HSPE1P61604 102 aaKnown RBP10.85□□□□□ -0.67
PRKDC-203ENST00000432581 RPL11P62913 178 aaKnown RBP10.85□□□□□ -0.67
PRKDC-203ENST00000432581 LEMD1Q68G75 181 aa10.85□□□□□ -0.67
PRKDC-203ENST00000432581 ZNF600Q6ZNG1 722 aa10.85□□□□□ -0.67
PRKDC-203ENST00000432581 TBC1D26Q86UD7 250 aa10.85□□□□□ -0.67
PRKDC-203ENST00000432581 APLNQ9ULZ1 77 aa10.85□□□□□ -0.67
PRKDC-203ENST00000432581 APOHP02749 345 aaPredicted RBP10.84□□□□□ -0.67
PRKDC-203ENST00000432581 HLA-DMAP28067 261 aa10.84□□□□□ -0.67
PRKDC-203ENST00000432581 TSPAN5P62079 268 aa10.84□□□□□ -0.67
PRKDC-203ENST00000432581 SAMD12Q8N8I0 201 aa10.84□□□□□ -0.67
PRKDC-203ENST00000432581 Q8NAQ8 132 aa10.84□□□□□ -0.67
PRKDC-203ENST00000432581 PUS1Q9Y606 427 aaKnown RBP eCLIP10.84□□□□□ -0.67
PRKDC-203ENST00000432581 VPS13DQ5THJ4 4388 aa10.84□□□□□ -0.67
PRKDC-203ENST00000432581 A0A1W2PS18 150 aa10.83□□□□□ -0.68
PRKDC-203ENST00000432581 IGKV1-39P01597 117 aa10.83□□□□□ -0.68
PRKDC-203ENST00000432581 IGKV1D-39P04432 117 aa10.83□□□□□ -0.68
PRKDC-203ENST00000432581 SPP1P10451 314 aa10.83□□□□□ -0.68
PRKDC-203ENST00000432581 MIFP14174 115 aa10.83□□□□□ -0.68
PRKDC-203ENST00000432581 LYSMD2Q8IV50 215 aa10.83□□□□□ -0.68
PRKDC-203ENST00000432581 CENPSQ8N2Z9 138 aa10.83□□□□□ -0.68
PRKDC-203ENST00000432581 LILRB2Q8N423 598 aa10.83□□□□□ -0.68
PRKDC-203ENST00000432581 MRGPRFQ96AM1 343 aa10.83□□□□□ -0.68
PRKDC-203ENST00000432581 ZFAND3Q9H8U3 227 aa10.83□□□□□ -0.68
PRKDC-203ENST00000432581 RABAC1Q9UI14 185 aa10.83□□□□□ -0.68
PRKDC-203ENST00000432581 IGHV4-28A0A0C4DH34 117 aa10.82□□□□□ -0.68
PRKDC-203ENST00000432581 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
PRKDC-203ENST00000432581 SNCAP37840 140 aa10.82□□□□□ -0.68
PRKDC-203ENST00000432581 UCP3P55916 312 aa10.82□□□□□ -0.68
PRKDC-203ENST00000432581 NEDD8Q15843 81 aa10.82□□□□□ -0.68
PRKDC-203ENST00000432581 MORN3Q6PF18 240 aaPredicted RBP10.82□□□□□ -0.68
PRKDC-203ENST00000432581 FAM24BQ8N5W8 94 aa10.82□□□□□ -0.68
PRKDC-203ENST00000432581 GRAMD2BQ96HH9 432 aa10.82□□□□□ -0.68
PRKDC-203ENST00000432581 TRAV10A0A0B4J240 114 aa10.81□□□□□ -0.68
PRKDC-203ENST00000432581 INS-IGF2F8WCM5 200 aa10.81□□□□□ -0.68
PRKDC-203ENST00000432581 CORTO00230 105 aa10.81□□□□□ -0.68
PRKDC-203ENST00000432581 SCGB2A1O75556 95 aa10.81□□□□□ -0.68
PRKDC-203ENST00000432581 TMEM50AO95807 157 aa10.81□□□□□ -0.68
PRKDC-203ENST00000432581 GIG44P09565 113 aaPredicted RBP10.81□□□□□ -0.68
PRKDC-203ENST00000432581 NPPCP23582 126 aa10.81□□□□□ -0.68
PRKDC-203ENST00000432581 SUB1P53999 127 aaKnown RBP eCLIP10.81□□□□□ -0.68
PRKDC-203ENST00000432581 LINC00336Q6ZUF6 198 aa10.81□□□□□ -0.68
PRKDC-203ENST00000432581 TRPT1Q86TN4 253 aaKnown RBP10.81□□□□□ -0.68
PRKDC-203ENST00000432581 SLC35G3Q8N808 338 aa10.81□□□□□ -0.68
PRKDC-203ENST00000432581 GPX8Q8TED1 209 aa10.81□□□□□ -0.68
PRKDC-203ENST00000432581 METTL26Q96S19 204 aa10.81□□□□□ -0.68
PRKDC-203ENST00000432581 DNAH6Q9C0G6 4158 aa10.8□□□□□ -0.68
PRKDC-203ENST00000432581 A0A1B0GU03 582 aa10.8□□□□□ -0.68
PRKDC-203ENST00000432581 ZNF705EA8MWA4 302 aaPredicted RBP10.8□□□□□ -0.68
PRKDC-203ENST00000432581 K7EQG2 157 aa10.8□□□□□ -0.68
PRKDC-203ENST00000432581 RBMY1A1P0DJD3 496 aaKnown RBP10.8□□□□□ -0.68
PRKDC-203ENST00000432581 RBMY1CP0DJD4 496 aa10.8□□□□□ -0.68
PRKDC-203ENST00000432581 HLA-DMBP28068 263 aa10.8□□□□□ -0.68
PRKDC-203ENST00000432581 RPS19P39019 145 aaKnown RBP10.8□□□□□ -0.68
PRKDC-203ENST00000432581 RBMY1FQ15415 496 aaKnown RBP10.8□□□□□ -0.68
PRKDC-203ENST00000432581 SPINK9Q5DT21 86 aa10.8□□□□□ -0.68
PRKDC-203ENST00000432581 PVRIGQ6DKI7 326 aa10.8□□□□□ -0.68
PRKDC-203ENST00000432581 STXBP6Q8NFX7 210 aa10.8□□□□□ -0.68
PRKDC-203ENST00000432581 NARS2Q96I59 477 aaKnown RBP10.8□□□□□ -0.68
PRKDC-203ENST00000432581 SCPEP1Q9HB40 452 aa10.8□□□□□ -0.68
PRKDC-203ENST00000432581 IGHV4-4A0A075B6R2 117 aa10.79□□□□□ -0.68
PRKDC-203ENST00000432581 ATG12O94817 140 aa10.79□□□□□ -0.68
PRKDC-203ENST00000432581 CRYBB3P26998 211 aa10.79□□□□□ -0.68
PRKDC-203ENST00000432581 RCVRNP35243 200 aa10.79□□□□□ -0.68
PRKDC-203ENST00000432581 TGFBR1P36897 503 aa10.79□□□□□ -0.68
PRKDC-203ENST00000432581 KCTD21Q4G0X4 260 aa10.79□□□□□ -0.68
PRKDC-203ENST00000432581 Q6ZTC4 211 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms