RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 HSPE1P61604 102 aaKnown RBP10.96□□□□□ -0.65
MSH5-208ENST00000429846 LSM3P62310 102 aaKnown RBP10.96□□□□□ -0.65
MSH5-208ENST00000429846 FAM90A2PQ658T7 463 aa10.96□□□□□ -0.65
MSH5-208ENST00000429846 PHLDA1Q8WV24 401 aaPredicted RBP10.96□□□□□ -0.65
MSH5-208ENST00000429846 ZNF486Q96H40 463 aaPredicted RBP10.96□□□□□ -0.65
MSH5-208ENST00000429846 RARRES2Q99969 163 aa10.96□□□□□ -0.65
MSH5-208ENST00000429846 MFFQ9GZY8 342 aa10.96□□□□□ -0.65
MSH5-208ENST00000429846 A0A087WXM4 84 aa10.95□□□□□ -0.66
MSH5-208ENST00000429846 INS-IGF2F8WCM5 200 aa10.95□□□□□ -0.66
MSH5-208ENST00000429846 CORTO00230 105 aa10.95□□□□□ -0.66
MSH5-208ENST00000429846 TFPI2P48307 235 aa10.95□□□□□ -0.66
MSH5-208ENST00000429846 RND3P61587 244 aa10.95□□□□□ -0.66
MSH5-208ENST00000429846 DUSP18Q8NEJ0 188 aa10.95□□□□□ -0.66
MSH5-208ENST00000429846 PINX1Q96BK5 328 aaKnown RBP10.95□□□□□ -0.66
MSH5-208ENST00000429846 VSIRQ9H7M9 311 aa10.95□□□□□ -0.66
MSH5-208ENST00000429846 COMMD3Q9UBI1 195 aa10.95□□□□□ -0.66
MSH5-208ENST00000429846 IGKV3-7A0A075B6H7 116 aa10.94□□□□□ -0.66
MSH5-208ENST00000429846 IGHV3-49A0A0A0MS15 119 aa10.94□□□□□ -0.66
MSH5-208ENST00000429846 TRAV2A0A0B4J234 112 aa10.94□□□□□ -0.66
MSH5-208ENST00000429846 DFFBO76075 338 aa10.94□□□□□ -0.66
MSH5-208ENST00000429846 ATG12O94817 140 aa10.94□□□□□ -0.66
MSH5-208ENST00000429846 SNCAP37840 140 aa10.94□□□□□ -0.66
MSH5-208ENST00000429846 ZNF124Q15973 351 aa10.94□□□□□ -0.66
MSH5-208ENST00000429846 LGALS9CQ6DKI2 356 aa10.94□□□□□ -0.66
MSH5-208ENST00000429846 ZNF600Q6ZNG1 722 aa10.94□□□□□ -0.66
MSH5-208ENST00000429846 TCF24Q7RTU0 167 aa10.94□□□□□ -0.66
MSH5-208ENST00000429846 SNX29P2Q8IUI4 249 aa10.94□□□□□ -0.66
MSH5-208ENST00000429846 TMEM231Q9H6L2 316 aa10.94□□□□□ -0.66
MSH5-208ENST00000429846 ST8SIA3O43173 380 aa10.93□□□□□ -0.66
MSH5-208ENST00000429846 SCGB2A1O75556 95 aa10.93□□□□□ -0.66
MSH5-208ENST00000429846 TNFAIP8O95379 198 aa10.93□□□□□ -0.66
MSH5-208ENST00000429846 TOMM20LQ6UXN7 152 aa10.93□□□□□ -0.66
MSH5-208ENST00000429846 SLC35G3Q8N808 338 aa10.93□□□□□ -0.66
MSH5-208ENST00000429846 PDCD10Q9BUL8 212 aa10.93□□□□□ -0.66
MSH5-208ENST00000429846 ZFAND3Q9H8U3 227 aa10.93□□□□□ -0.66
MSH5-208ENST00000429846 IGHV3OR16-13A0A075B7E8 117 aa10.92□□□□□ -0.66
MSH5-208ENST00000429846 IGHV3-74A0A0B4J1X5 117 aa10.92□□□□□ -0.66
MSH5-208ENST00000429846 DNASE2O00115 360 aaPredicted RBP10.92□□□□□ -0.66
MSH5-208ENST00000429846 CA1P00915 261 aaPredicted RBP10.92□□□□□ -0.66
MSH5-208ENST00000429846 IGHV3-48P01763 117 aa10.92□□□□□ -0.66
MSH5-208ENST00000429846 TBPP20226 339 aa10.92□□□□□ -0.66
MSH5-208ENST00000429846 AKR1C2P52895 323 aa10.92□□□□□ -0.66
MSH5-208ENST00000429846 SUB1P53999 127 aaKnown RBP eCLIP10.92□□□□□ -0.662e-7■■□□□ 14.2
MSH5-208ENST00000429846 RBMS2Q15434 407 aaKnown RBP10.92□□□□□ -0.66
MSH5-208ENST00000429846 GBGT1Q8N5D6 347 aa10.92□□□□□ -0.66
MSH5-208ENST00000429846 ARRDC1Q8N5I2 433 aa10.92□□□□□ -0.66
MSH5-208ENST00000429846 OR11H2Q8NH07 326 aa10.92□□□□□ -0.66
MSH5-208ENST00000429846 C11orf45Q8TAV5 145 aa10.92□□□□□ -0.66
MSH5-208ENST00000429846 ST8SIA2Q92186 375 aa10.92□□□□□ -0.66
MSH5-208ENST00000429846 MS4A6AQ9H2W1 248 aa10.92□□□□□ -0.66
MSH5-208ENST00000429846 PUS1Q9Y606 427 aaKnown RBP eCLIP10.92□□□□□ -0.66
MSH5-208ENST00000429846 IFNA4P05014 189 aa10.91□□□□□ -0.66
MSH5-208ENST00000429846 P0C879 139 aa10.91□□□□□ -0.66
MSH5-208ENST00000429846 PGAM2P15259 253 aa10.91□□□□□ -0.66
MSH5-208ENST00000429846 ELK1P19419 428 aa10.91□□□□□ -0.66
MSH5-208ENST00000429846 PIGPP57054 158 aa10.91□□□□□ -0.66
MSH5-208ENST00000429846 TCTAP57738 103 aa10.91□□□□□ -0.66
MSH5-208ENST00000429846 NCS1P62166 190 aa10.91□□□□□ -0.66
MSH5-208ENST00000429846 TMEM187Q14656 261 aa10.91□□□□□ -0.66
MSH5-208ENST00000429846 TMEM41BQ5BJD5 291 aa10.91□□□□□ -0.66
MSH5-208ENST00000429846 RNASE10Q5GAN6 216 aaKnown RBP10.91□□□□□ -0.66
MSH5-208ENST00000429846 PVRIGQ6DKI7 326 aa10.91□□□□□ -0.66
MSH5-208ENST00000429846 LHFPL1Q86WI0 220 aa10.91□□□□□ -0.66
MSH5-208ENST00000429846 A0A1W2PS18 150 aa10.9□□□□□ -0.66
MSH5-208ENST00000429846 M0QYG6 137 aa10.9□□□□□ -0.66
MSH5-208ENST00000429846 B3GALNT1O75752 331 aa10.9□□□□□ -0.66
MSH5-208ENST00000429846 TMEM50AO95807 157 aa10.9□□□□□ -0.66
MSH5-208ENST00000429846 IFNA17P01571 189 aa10.9□□□□□ -0.66
MSH5-208ENST00000429846 IGKV1-5P01602 117 aa10.9□□□□□ -0.66
MSH5-208ENST00000429846 DEFB131AP59861 70 aa10.9□□□□□ -0.66
MSH5-208ENST00000429846 SPINK9Q5DT21 86 aa10.9□□□□□ -0.66
MSH5-208ENST00000429846 MZT2AQ6P582 158 aa10.9□□□□□ -0.66
MSH5-208ENST00000429846 RPP25LQ8N5L8 163 aaKnown RBP10.9□□□□□ -0.66
MSH5-208ENST00000429846 AP3S1Q92572 193 aa10.9□□□□□ -0.66
MSH5-208ENST00000429846 TP53RKQ96S44 253 aa10.9□□□□□ -0.66
MSH5-208ENST00000429846 FUNDC2Q9BWH2 189 aa10.9□□□□□ -0.66
MSH5-208ENST00000429846 A0A0B4J293 547 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 C3orf85A0A1B0GTC6 90 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 HPGDSO60760 199 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 CLN5O75503 358 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 APOHP02749 345 aaPredicted RBP10.89□□□□□ -0.67
MSH5-208ENST00000429846 RNASE2P10153 161 aaKnown RBP10.89□□□□□ -0.67
MSH5-208ENST00000429846 NPPCP23582 126 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 HOXA1P49639 335 aaPredicted RBP10.89□□□□□ -0.67
MSH5-208ENST00000429846 RORCP51449 518 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 NANOS2P60321 138 aaKnown RBP10.89□□□□□ -0.67
MSH5-208ENST00000429846 VBP1P61758 197 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 RPL11P62913 178 aaKnown RBP10.89□□□□□ -0.67
MSH5-208ENST00000429846 IZUMO4Q1ZYL8 232 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 STHQ8IWL8 128 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 CCDC71LQ8N9Z2 235 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 C15orf40Q8WUR7 153 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 METTL26Q96S19 204 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 ENY2Q9NPA8 101 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 COPZ2Q9P299 210 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 FBXL17Q9UF56 701 aa10.89□□□□□ -0.67
MSH5-208ENST00000429846 A0A1B0GU03 582 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 FAM25AB3EWG3 89 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 FAM25CB3EWG5 89 aa10.88□□□□□ -0.67
MSH5-208ENST00000429846 FAM25GB3EWG6 89 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms