RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 FHITP49789 147 aa11.46□□□□□ -0.57
RPL28-202ENST00000426763 FAM215AQ9Y5M1 114 aa11.46□□□□□ -0.57
RPL28-202ENST00000426763 CCKARP32238 428 aa11.46□□□□□ -0.58
RPL28-202ENST00000426763 MEOX2P50222 304 aa11.46□□□□□ -0.58
RPL28-202ENST00000426763 SLC25A48Q6ZT89 311 aaKnown RBP11.46□□□□□ -0.58
RPL28-202ENST00000426763 TCRBV4S1A1TA0A5B7 111 aa11.46□□□□□ -0.58
RPL28-202ENST00000426763 NPIPB6E9PJ23 425 aa11.46□□□□□ -0.58
RPL28-202ENST00000426763 SGK494Q96LW2 274 aa11.46□□□□□ -0.58
RPL28-202ENST00000426763 HSPB8Q9UJY1 196 aa11.46□□□□□ -0.58
RPL28-202ENST00000426763 TRAV41A0A0B4J266 112 aa11.45□□□□□ -0.58
RPL28-202ENST00000426763 GPR82Q96P67 336 aa11.45□□□□□ -0.58
RPL28-202ENST00000426763 TBL2Q9Y4P3 447 aaKnown RBP11.45□□□□□ -0.58
RPL28-202ENST00000426763 GCGP01275 180 aa11.45□□□□□ -0.58
RPL28-202ENST00000426763 WT1P19544 449 aaPredicted RBP11.45□□□□□ -0.58
RPL28-202ENST00000426763 ZNF600Q6ZNG1 722 aa11.45□□□□□ -0.58
RPL28-202ENST00000426763 C8orf46Q8TAG6 207 aa11.45□□□□□ -0.58
RPL28-202ENST00000426763 IGHV3OR16-8A0A075B7F1 116 aa11.45□□□□□ -0.58
RPL28-202ENST00000426763 FAM53AQ6NSI3 398 aaPredicted RBP11.45□□□□□ -0.58
RPL28-202ENST00000426763 LYPD2Q6UXB3 125 aa11.45□□□□□ -0.58
RPL28-202ENST00000426763 ITLN2Q8WWU7 325 aaPredicted RBP11.45□□□□□ -0.58
RPL28-202ENST00000426763 PARLQ9H300 379 aa11.45□□□□□ -0.58
RPL28-202ENST00000426763 CKS2P33552 79 aa11.45□□□□□ -0.58
RPL28-202ENST00000426763 HNRNPA3P51991 378 aaKnown RBP11.45□□□□□ -0.58
RPL28-202ENST00000426763 COQ2Q96H96 371 aa11.45□□□□□ -0.58
RPL28-202ENST00000426763 PGLYRP4Q96LB8 373 aa11.45□□□□□ -0.58
RPL28-202ENST00000426763 SCN8AQ9UQD0 1980 aa11.45□□□□□ -0.58
RPL28-202ENST00000426763 DIDO1Q9BTC0 2240 aaKnown RBP11.45□□□□□ -0.58
RPL28-202ENST00000426763 TMEM183BQ1AE95 376 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 TMEM250H0YL14 139 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 LHFPL1Q86WI0 220 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 ZNF257Q9Y2Q1 563 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 ESPL1Q14674 2120 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 CGAP01215 116 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 TRGC1P0CF51 173 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 CD81P60033 236 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 LRTM2Q8N967 370 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 FAM181BA6NEQ2 426 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 PRSS8Q16651 343 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 ASCL4Q6XD76 172 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 BRD3OSQ6XYD6 125 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 C12orf57Q99622 126 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 WISP1O95388 367 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 ID3Q02535 119 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 IGFL2Q6UWQ7 119 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 CDC42EP3Q9UKI2 254 aa11.44□□□□□ -0.58
RPL28-202ENST00000426763 H3BUX3 64 aa11.43□□□□□ -0.58
RPL28-202ENST00000426763 HLA-DQA1P01909 254 aa11.43□□□□□ -0.58
RPL28-202ENST00000426763 LOC389332A0A1B0GUA5 103 aa11.43□□□□□ -0.58
RPL28-202ENST00000426763 BUB1B-PAK6H3BSN5 160 aa11.43□□□□□ -0.58
RPL28-202ENST00000426763 UBE2L6O14933 153 aa11.43□□□□□ -0.58
RPL28-202ENST00000426763 CEACAM4O75871 244 aa11.43□□□□□ -0.58
RPL28-202ENST00000426763 GATA2P23769 480 aaPredicted RBP11.43□□□□□ -0.58
RPL28-202ENST00000426763 QRFPP83859 136 aa11.43□□□□□ -0.58
RPL28-202ENST00000426763 CENPWQ5EE01 88 aa11.43□□□□□ -0.58
RPL28-202ENST00000426763 ZNF506Q5JVG8 444 aa11.43□□□□□ -0.58
RPL28-202ENST00000426763 RNF144BQ7Z419 303 aa11.43□□□□□ -0.58
RPL28-202ENST00000426763 TMEM219Q86XT9 240 aa11.43□□□□□ -0.58
RPL28-202ENST00000426763 RNF125Q96EQ8 232 aa11.43□□□□□ -0.58
RPL28-202ENST00000426763 GSX1Q9H4S2 264 aaPredicted RBP11.43□□□□□ -0.58
RPL28-202ENST00000426763 KIF26AQ9ULI4 1882 aaPredicted RBP11.43□□□□□ -0.58
RPL28-202ENST00000426763 AMMECR1LQ6DCA0 310 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 SLX1AQ9BQ83 275 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 C2orf16Q68DN1 1984 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 GATA3P23771 443 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 MIR17HGQ75NE6 70 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 Q8TCH9 128 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 TTC28Q96AY4 2481 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 CACNA1DQ01668 2161 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 TRAV14DV4A0A0A6YYC5 116 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 PSMB11A5LHX3 300 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 GATA4P43694 442 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 Q5PR19 223 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 RNF222A6NCQ9 220 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 RELBQ01201 579 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 ZNF524Q96C55 264 aa11.42□□□□□ -0.58
RPL28-202ENST00000426763 PRTN3P24158 256 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 OR8A1Q8NGG7 326 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 OR1P1Q8NH06 330 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 DOCK9Q9BZ29 2069 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 PEX7O00628 323 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 RPL29P47914 159 aaKnown RBP11.41□□□□□ -0.58
RPL28-202ENST00000426763 ZNF841Q6ZN19 808 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 OR4D5Q8NGN0 318 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 AGAP20933 346 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 Q6ZS49 121 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 MARVELD3Q96A59 401 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 SLC50A1Q9BRV3 221 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 LINC00527Q9UJ94 153 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 H0YJW9 148 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 IGLV1-44P01699 117 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 MSMBP08118 114 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 EFNB3Q15768 340 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 FAM71F2Q6NXP2 309 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 HEATR1Q9H583 2144 aaKnown RBP11.41□□□□□ -0.58
RPL28-202ENST00000426763 A0A0B4J293 547 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 RNF126Q9BV68 326 aa11.41□□□□□ -0.58
RPL28-202ENST00000426763 ZNF343Q6P1L6 599 aa11.4□□□□□ -0.58
RPL28-202ENST00000426763 TMEM167AQ8TBQ9 72 aa11.4□□□□□ -0.58
RPL28-202ENST00000426763 TECTAO75443 2155 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms