RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 IGHV3-21A0A0B4J1V1 117 aa13.8□□□□□ -0.2
FN1-208ENST00000426059 HMGB3O15347 200 aaKnown RBP13.8□□□□□ -0.2
FN1-208ENST00000426059 FAM106CPP0CH98 169 aa13.8□□□□□ -0.2
FN1-208ENST00000426059 GAMTQ14353 236 aa13.8□□□□□ -0.2
FN1-208ENST00000426059 FXYD3Q14802 87 aa13.8□□□□□ -0.2
FN1-208ENST00000426059 KLF17Q5JT82 389 aaPredicted RBP13.8□□□□□ -0.2
FN1-208ENST00000426059 EIF4E3Q8N5X7 224 aaKnown RBP13.8□□□□□ -0.2
FN1-208ENST00000426059 LINC01356Q8N9X3 169 aa13.8□□□□□ -0.2
FN1-208ENST00000426059 PDZD2O15018 2839 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 IGKV1OR2-108A0A075B7D4 117 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 MIC13Q5XKP0 118 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 SPSB3Q6PJ21 355 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 LCN15Q6UWW0 184 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 CENPVQ7Z7K6 275 aaPredicted RBP13.79□□□□□ -0.2
FN1-208ENST00000426059 KRTAP1-3Q8IUG1 177 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 RPP25LQ8N5L8 163 aaKnown RBP13.79□□□□□ -0.2
FN1-208ENST00000426059 ABHD5Q8WTS1 349 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 TIMM9Q9Y5J7 89 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 SH2D7A6NKC9 451 aaPredicted RBP13.79□□□□□ -0.2
FN1-208ENST00000426059 SCAF4O95104 1147 aaKnown RBP13.79□□□□□ -0.2
FN1-208ENST00000426059 BRS3P32247 399 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 OPRK1P41145 380 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 FGF8P55075 233 aaPredicted RBP13.79□□□□□ -0.2
FN1-208ENST00000426059 CD69Q07108 199 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 TMEM41BQ5BJD5 291 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 IL34Q6ZMJ4 242 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 TMEM219Q86XT9 240 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 MISP3Q96FF7 219 aa13.79□□□□□ -0.2
FN1-208ENST00000426059 LSM4Q9Y4Z0 139 aaKnown RBP13.79□□□□□ -0.2
FN1-208ENST00000426059 RAB19A4D1S5 217 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 CX3CL1P78423 397 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 NDPQ00604 133 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 TEPPQ6URK8 271 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 LRRC75A-AS1Q8N1F1 130 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 ACY3Q96HD9 319 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 RCC1LQ96I51 464 aaKnown RBP13.78□□□□□ -0.2
FN1-208ENST00000426059 GGTLC1Q9BX51 225 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 MRPL36Q9P0J6 103 aaKnown RBP13.78□□□□□ -0.2
FN1-208ENST00000426059 HECTD1Q9ULT8 2610 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 ITPR3Q14573 2671 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 TRAV20A0A0B4J274 112 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 Q8N9W7 124 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 C22orf15Q8WYQ4 148 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 SLC25A22Q9H936 323 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 TREM1Q9NP99 234 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 DMRT1Q9Y5R6 373 aa13.78□□□□□ -0.2
FN1-208ENST00000426059 CREBBPQ92793 2442 aa13.77□□□□□ -0.2
FN1-208ENST00000426059 UNC79Q9P2D8 2635 aa13.77□□□□□ -0.21
FN1-208ENST00000426059 C17orf112F2Z3M2 114 aa13.77□□□□□ -0.21
FN1-208ENST00000426059 GATA2P23769 480 aaPredicted RBP13.77□□□□□ -0.21
FN1-208ENST00000426059 SUB1P53999 127 aaKnown RBP eCLIP13.77□□□□□ -0.21
FN1-208ENST00000426059 LOXL1Q08397 574 aaPredicted RBP13.77□□□□□ -0.21
FN1-208ENST00000426059 SLC16A13Q7RTY0 426 aa13.77□□□□□ -0.21
FN1-208ENST00000426059 C9JQL5 133 aa13.76□□□□□ -0.21
FN1-208ENST00000426059 OR10G4Q8NGN3 311 aa13.76□□□□□ -0.21
FN1-208ENST00000426059 OR10G9Q8NGN4 311 aa13.76□□□□□ -0.21
FN1-208ENST00000426059 OR10G7Q8NGN6 311 aa13.76□□□□□ -0.21
FN1-208ENST00000426059 IGHV4-31P0DP07 118 aa13.76□□□□□ -0.21
FN1-208ENST00000426059 ZP3P21754 424 aa13.76□□□□□ -0.21
FN1-208ENST00000426059 PXMP4Q9Y6I8 212 aa13.76□□□□□ -0.21
FN1-208ENST00000426059 YIF1AO95070 293 aa13.75□□□□□ -0.21
FN1-208ENST00000426059 ATP5IP56385 69 aaPredicted RBP13.75□□□□□ -0.21
FN1-208ENST00000426059 BTN1A1Q13410 526 aa13.75□□□□□ -0.21
FN1-208ENST00000426059 TMEM249Q2WGJ8 235 aa13.75□□□□□ -0.21
FN1-208ENST00000426059 WFDC11Q8NEX6 87 aa13.75□□□□□ -0.21
FN1-208ENST00000426059 PIFOQ8TCI5 191 aa13.75□□□□□ -0.21
FN1-208ENST00000426059 RARRES2Q99969 163 aa13.75□□□□□ -0.21
FN1-208ENST00000426059 HSPB9Q9BQS6 159 aa13.75□□□□□ -0.21
FN1-208ENST00000426059 MPDU1O75352 247 aa13.75□□□□□ -0.21
FN1-208ENST00000426059 TMEM144Q7Z5S9 345 aa13.75□□□□□ -0.21
FN1-208ENST00000426059 NPIPB3Q92617 1050 aa13.75□□□□□ -0.21
FN1-208ENST00000426059 SSX3Q99909 188 aa13.75□□□□□ -0.21
FN1-208ENST00000426059 SLC25A33Q9BSK2 321 aa13.75□□□□□ -0.21
FN1-208ENST00000426059 WNT10AQ9GZT5 417 aa13.75□□□□□ -0.21
FN1-208ENST00000426059 EIF5A2Q9GZV4 153 aaKnown RBP13.75□□□□□ -0.21
FN1-208ENST00000426059 F11RQ9Y624 299 aaKnown RBP13.75□□□□□ -0.21
FN1-208ENST00000426059 MDFIC2A0A1B0GVS7 189 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 ZNF562Q6V9R5 426 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 DPPA3Q6W0C5 159 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 RNASEH2CQ8TDP1 164 aaKnown RBP13.74□□□□□ -0.21
FN1-208ENST00000426059 SCRT1Q9BWW7 348 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 IGHV7-81A0A0B4J1V7 117 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 OR10J1P30954 320 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 LY6EQ16553 131 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 GUK1Q16774 197 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 HAGHQ16775 308 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 ASPHD1Q5U4P2 390 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 MRPL41Q8IXM3 137 aaKnown RBP13.74□□□□□ -0.21
FN1-208ENST00000426059 CIARTQ8N365 385 aaPredicted RBP13.74□□□□□ -0.21
FN1-208ENST00000426059 STPG3Q8N7X2 389 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 OR1P1Q8NH06 330 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 ARPC1AQ92747 370 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 MBD6Q96DN6 1003 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 TLN2Q9Y4G6 2542 aa13.74□□□□□ -0.21
FN1-208ENST00000426059 NUDT19A8MXV4 375 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 GATA3P23771 443 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 B2MP61769 119 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 UQCC3Q6UW78 93 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 ZNF114Q8NC26 417 aa13.73□□□□□ -0.21
FN1-208ENST00000426059 LFNGQ8NES3 379 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms