RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 IGHV1-69-2A0A0G2JMI3 117 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 A0A1W2PRE2 83 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 TIMP3P35625 211 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 EFNB3Q15768 340 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 TMEM256Q8N2U0 113 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 LYZL4Q96KX0 146 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 MRPL20Q9BYC9 149 aaKnown RBP10.35□□□□□ -0.75
CLCN4-203ENST00000421085 PILRBQ9UKJ0 227 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 TRIP12Q14669 1992 aaPredicted RBP10.35□□□□□ -0.75
CLCN4-203ENST00000421085 MAJINQ3KP22 176 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 REPIN1Q9BWE0 567 aaKnown RBP10.35□□□□□ -0.75
CLCN4-203ENST00000421085 KBTBD11-OT1A0A1B0GTJ5 212 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 A8MWV9 139 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 GAS1P54826 345 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 TPTE2P1Q5T6R2 138 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 TMEM101Q96IK0 257 aa10.35□□□□□ -0.75
CLCN4-203ENST00000421085 CHCHD2Q9Y6H1 151 aaPredicted RBP10.35□□□□□ -0.75
CLCN4-203ENST00000421085 RNASE4P34096 147 aaKnown RBP10.34□□□□□ -0.75
CLCN4-203ENST00000421085 MS4A6AQ9H2W1 248 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 TDRD15B5MCY1 1934 aaKnown RBP10.34□□□□□ -0.75
CLCN4-203ENST00000421085 A0A1B0GW64 132 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 TIAF1O95411 115 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 CD69Q07108 199 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 FOXL1Q12952 345 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 ZNF664Q8N3J9 261 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 FBXL7Q9UJT9 491 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 COL4A1P02462 1669 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 EVI2AP22794 236 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 ERVK11-1P61568 191 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 ACTL10Q5JWF8 245 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 FAM89BQ8N5H3 189 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 SRSF1Q07955 248 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLCN4-203ENST00000421085 SRSF4Q08170 494 aaKnown RBP10.34□□□□□ -0.75
CLCN4-203ENST00000421085 TSKUQ8WUA8 353 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 TIMP4Q99727 224 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 SEMA5BQ9P283 1151 aa10.34□□□□□ -0.75
CLCN4-203ENST00000421085 TRAV2A0A0B4J234 112 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 A0A0G2JLM5 398 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 TM4SF5O14894 197 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 CHODLQ9H9P2 273 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 PGPEP1Q9NXJ5 209 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 C21orf62Q9NYP8 219 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 SAA1P0DJI8 122 aaPredicted RBP10.33□□□□□ -0.76
CLCN4-203ENST00000421085 FAM216BQ8N7L0 139 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 IFI27L1Q96BM0 104 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 ZNF815PA8K554 130 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 CNTFRP26992 372 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 TOMM7Q9P0U1 55 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 CHTOPQ9Y3Y2 248 aaKnown RBP10.33□□□□□ -0.76
CLCN4-203ENST00000421085 ANKRD36A6QL64 1941 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 C15orf61A6NNL5 157 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 TRGV3P03979 118 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 UBE2V1Q13404 147 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 Q6ZT83 130 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 CYSLTR1Q9Y271 337 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 SEC16AO15027 2179 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 FABP5P3A8MUU1 101 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 LYPD3O95274 346 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 CLEC2AQ6UVW9 174 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 TPRP12270 2363 aaKnown RBP10.33□□□□□ -0.76
CLCN4-203ENST00000421085 IGKV3D-20A0A0C4DH25 116 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 UPK2O00526 184 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 PRR31Q5SQ13 230 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 DMRTC2Q8IXT2 367 aaPredicted RBP10.33□□□□□ -0.76
CLCN4-203ENST00000421085 RFNGQ9Y644 331 aa10.33□□□□□ -0.76
CLCN4-203ENST00000421085 SAA2-SAA4A0A096LPE2 208 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 SAA2P0DJI9 122 aaPredicted RBP10.32□□□□□ -0.76
CLCN4-203ENST00000421085 ZFAND6Q6FIF0 208 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 IGKV1D-33P01593 117 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 IGKV1-33P01594 117 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 CELA3AP09093 270 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 SUPT4H1P63272 117 aaKnown RBP10.32□□□□□ -0.76
CLCN4-203ENST00000421085 PLAURQ03405 335 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 SP7Q8TDD2 431 aaPredicted RBP10.32□□□□□ -0.76
CLCN4-203ENST00000421085 NXT2Q9NPJ8 142 aaKnown RBP10.32□□□□□ -0.76
CLCN4-203ENST00000421085 hDV102S1A0JD36 115 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 IGHV3OR16-10A0A075B7F0 116 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 LOXL4Q96JB6 756 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 SLC25A2Q9BXI2 301 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 STRCP1A6NGW2 1772 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 A0A087X0K7 114 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 OR9G9P0C7N8 305 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 GAGE2BQ13066 116 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 GAGE2EQ4V326 116 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 ATP5L2Q7Z4Y8 100 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 LURAP1LQ8IV03 231 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 NPFFR1Q9GZQ6 430 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 GTSF1LQ9H1H1 148 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 GAGE2DQ9UEU5 116 aa10.32□□□□□ -0.76
CLCN4-203ENST00000421085 CECR9P0C854 216 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 ESDP10768 282 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 PSG7Q13046 419 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 LCN12Q6JVE5 192 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 RBMY1BA6NDE4 496 aaKnown RBP10.31□□□□□ -0.76
CLCN4-203ENST00000421085 RBMY1EA6NEQ0 496 aaKnown RBP10.31□□□□□ -0.76
CLCN4-203ENST00000421085 RBMY1DP0C7P1 496 aaKnown RBP10.31□□□□□ -0.76
CLCN4-203ENST00000421085 RBMY1A1P0DJD3 496 aaKnown RBP10.31□□□□□ -0.76
CLCN4-203ENST00000421085 RBMY1CP0DJD4 496 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 CCL1P22362 96 aa10.31□□□□□ -0.76
CLCN4-203ENST00000421085 MPV17L2Q567V2 206 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms