RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 MT-ND4LP03901 98 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 RNF224P0DH78 156 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 AREGP15514 252 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 ELOBQ15370 118 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 RNF212Q495C1 297 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 TMEM177Q53S58 311 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 PRORYQ9H606 182 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 UNKLQ9H9P5 680 aaKnown RBP7.09□□□□□ -1.27
SNCA-206ENST00000420646 UBTD1Q9HAC8 227 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 WASHC3Q9Y3C0 194 aa7.09□□□□□ -1.27
SNCA-206ENST00000420646 NDUFB4O95168 129 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 IGLV1-47P01700 117 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 BTF3P20290 206 aaKnown RBP7.08□□□□□ -1.28
SNCA-206ENST00000420646 OR10J1P30954 320 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 OPRK1P41145 380 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 ZNF90Q03938 601 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 FAM78BQ5VT40 261 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 MORN5Q5VZ52 161 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 OR4P4Q8NGL7 312 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 GSX1Q9H4S2 264 aaPredicted RBP7.08□□□□□ -1.28
SNCA-206ENST00000420646 SDF2L1Q9HCN8 221 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 NIT2Q9NQR4 276 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 A0A1W2PPI3 338 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 BUB1B-PAK6H3BSN5 160 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 OR10J4P0C629 311 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 LINC00869P0C866 280 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 HLA-DRB5Q30154 266 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 ASPHD1Q5U4P2 390 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 SPNS3Q6ZMD2 512 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 ZNF114Q8NC26 417 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 YPEL4Q96NS1 127 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 UHRF2Q96PU4 802 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 RAB1BQ9H0U4 201 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 FBXL15Q9H469 300 aa7.08□□□□□ -1.28
SNCA-206ENST00000420646 TRAV5A0A0B4J249 113 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 IGHV1-3A0A0C4DH29 117 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 CUBNO60494 3623 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 PRB4P10163 310 aaPredicted RBP7.07□□□□□ -1.28
SNCA-206ENST00000420646 TNXAQ16473 311 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 OR1L8Q8NGR8 309 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 ELOVL1Q9BW60 279 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 CBLN4Q9NTU7 201 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 ZNF257Q9Y2Q1 563 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 YTHDF2Q9Y5A9 579 aaKnown RBP7.07□□□□□ -1.28
SNCA-206ENST00000420646 IFNA1P01562 189 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 C4orf17Q53FE4 359 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 C11orf71Q6IPW1 123 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 PDPNQ86YL7 162 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 OR8B3Q8NGG8 313 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 OR5B3Q8NH48 314 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 NPIPB3Q92617 1050 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 OR8B2Q96RD0 313 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 P2RX4Q99571 388 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 DOPEY1Q5JWR5 2465 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 A0A087X0M5 115 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 A0A1B0GX30 115 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 SEC14L6B5MCN3 397 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 SMIM6P0DI80 62 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 ZFP36P26651 326 aaKnown RBP7.07□□□□□ -1.28
SNCA-206ENST00000420646 MFAP2P55001 183 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 RPL23P62829 140 aaKnown RBP7.07□□□□□ -1.28
SNCA-206ENST00000420646 LINC00311Q8N616 119 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 TMEM37Q8WXS4 190 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 RPEQ96AT9 228 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 FAM103A1Q9BTL3 118 aaKnown RBP7.07□□□□□ -1.28
SNCA-206ENST00000420646 CLEC7AQ9BXN2 247 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 LPAR2Q9HBW0 351 aa7.07□□□□□ -1.28
SNCA-206ENST00000420646 TRBV20OR9-2A0A075B6H5 130 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 SCO2A0A1W2PP80 73 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 C1orf196B1AJZ1 125 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 TIMM23O14925 209 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 S100A9P06702 114 aaKnown RBP7.06□□□□□ -1.28
SNCA-206ENST00000420646 USF1P22415 310 aaPredicted RBP7.06□□□□□ -1.28
SNCA-206ENST00000420646 TMEM241Q24JQ0 296 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 TMEM167AQ8TBQ9 72 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 ITLN2Q8WWU7 325 aaPredicted RBP7.06□□□□□ -1.28
SNCA-206ENST00000420646 MISP3Q96FF7 219 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 NEIL1Q96FI4 390 aaPredicted RBP7.06□□□□□ -1.28
SNCA-206ENST00000420646 GGACTQ9BVM4 153 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 MPDU1O75352 247 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 STAG3L2P0CL84 134 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 STAG3L3P0CL85 134 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 CHRNA7P36544 502 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 LCN2P80188 198 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 ERHP84090 104 aaKnown RBP7.06□□□□□ -1.28
SNCA-206ENST00000420646 PRR20EP86478 221 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 PRR20CP86479 221 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 PRR20DP86480 221 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 PRR20BP86481 221 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 PRR20AP86496 221 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 SSX2Q16385 188 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 TMEM30BQ3MIR4 351 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 ZNF596Q8TC21 504 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 TUBA4BQ9H853 241 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 METTL1Q9UBP6 276 aaKnown RBP7.06□□□□□ -1.28
SNCA-206ENST00000420646 MIOXQ9UGB7 285 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 SLC45A2Q9UMX9 530 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 S4R3C0 116 aa7.06□□□□□ -1.28
SNCA-206ENST00000420646 MOSP00540 346 aa7.05□□□□□ -1.28
SNCA-206ENST00000420646 TRGC2P03986 189 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms