RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 OR1L8Q8NGR8 309 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 ST8SIA2Q92186 375 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 LSM10Q969L4 123 aaKnown RBP9.36□□□□□ -0.91
LINC00339-203ENST00000420503 MISP3Q96FF7 219 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 KRTAP4-5Q9BYR2 181 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 COMMD3Q9UBI1 195 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 OR51B2Q9Y5P1 312 aa9.36□□□□□ -0.91
LINC00339-203ENST00000420503 IGHV4-28A0A0C4DH34 117 aa9.35□□□□□ -0.91
LINC00339-203ENST00000420503 I3L2K1 104 aa9.35□□□□□ -0.91
LINC00339-203ENST00000420503 C4BPBP20851 252 aa9.35□□□□□ -0.91
LINC00339-203ENST00000420503 DEFB131AP59861 70 aa9.35□□□□□ -0.91
LINC00339-203ENST00000420503 Q6ZTC4 211 aa9.35□□□□□ -0.91
LINC00339-203ENST00000420503 TCF24Q7RTU0 167 aa9.35□□□□□ -0.91
LINC00339-203ENST00000420503 ZBTB34Q8NCN2 500 aa9.35□□□□□ -0.91
LINC00339-203ENST00000420503 S100A16Q96FQ6 103 aaKnown RBP9.35□□□□□ -0.91
LINC00339-203ENST00000420503 MFFQ9GZY8 342 aa9.35□□□□□ -0.91
LINC00339-203ENST00000420503 FXYD6Q9H0Q3 95 aa9.35□□□□□ -0.91
LINC00339-203ENST00000420503 AUNIPQ9H7T9 357 aa9.35□□□□□ -0.91
LINC00339-203ENST00000420503 DIABLOQ9NR28 239 aa9.35□□□□□ -0.91
LINC00339-203ENST00000420503 COMMD9Q9P000 198 aa9.35□□□□□ -0.91
LINC00339-203ENST00000420503 HPGDSO60760 199 aa9.34□□□□□ -0.91
LINC00339-203ENST00000420503 PGLYRP1O75594 196 aaPredicted RBP9.34□□□□□ -0.91
LINC00339-203ENST00000420503 DFFBO76075 338 aa9.34□□□□□ -0.91
LINC00339-203ENST00000420503 APOA1P02647 267 aa9.34□□□□□ -0.91
LINC00339-203ENST00000420503 ELK1P19419 428 aa9.34□□□□□ -0.91
LINC00339-203ENST00000420503 HLA-DMBP28068 263 aa9.34□□□□□ -0.91
LINC00339-203ENST00000420503 RFX2P48378 723 aa9.34□□□□□ -0.91
LINC00339-203ENST00000420503 SPINK9Q5DT21 86 aa9.34□□□□□ -0.91
LINC00339-203ENST00000420503 AP3S1Q92572 193 aa9.34□□□□□ -0.91
LINC00339-203ENST00000420503 OR10C1Q96KK4 312 aa9.34□□□□□ -0.91
LINC00339-203ENST00000420503 SLIRPQ9GZT3 109 aaKnown RBP9.34□□□□□ -0.91
LINC00339-203ENST00000420503 CCDC59Q9P031 241 aaKnown RBP9.34□□□□□ -0.91
LINC00339-203ENST00000420503 ELOA3CA0A087WX78 387 aaPredicted RBP9.33□□□□□ -0.92
LINC00339-203ENST00000420503 KNCNA6PVL3 124 aa9.33□□□□□ -0.92
LINC00339-203ENST00000420503 ZNF701M0R085 212 aaPredicted RBP9.33□□□□□ -0.92
LINC00339-203ENST00000420503 NOL3O60936 208 aaKnown RBP9.33□□□□□ -0.92
LINC00339-203ENST00000420503 MT-CO2P00403 227 aa9.33□□□□□ -0.92
LINC00339-203ENST00000420503 TAS2R20P59543 309 aa9.33□□□□□ -0.92
LINC00339-203ENST00000420503 ERVK-16P61578 105 aa9.33□□□□□ -0.92
LINC00339-203ENST00000420503 TMEM187Q14656 261 aa9.33□□□□□ -0.92
LINC00339-203ENST00000420503 IZUMO4Q1ZYL8 232 aa9.33□□□□□ -0.92
LINC00339-203ENST00000420503 MZT2AQ6P582 158 aa9.33□□□□□ -0.92
LINC00339-203ENST00000420503 TOMM20LQ6UXN7 152 aa9.33□□□□□ -0.92
LINC00339-203ENST00000420503 C6orf62Q9GZU0 229 aaPredicted RBP9.33□□□□□ -0.92
LINC00339-203ENST00000420503 NXF2Q9GZY0 626 aaKnown RBP9.33□□□□□ -0.92
LINC00339-203ENST00000420503 MS4A6AQ9H2W1 248 aa9.33□□□□□ -0.92
LINC00339-203ENST00000420503 MIXL1Q9H2W2 232 aa9.33□□□□□ -0.92
LINC00339-203ENST00000420503 CLEC5AQ9NY25 188 aa9.33□□□□□ -0.92
LINC00339-203ENST00000420503 EHFQ9NZC4 300 aa9.33□□□□□ -0.92
LINC00339-203ENST00000420503 CELA1Q9UNI1 258 aa9.33□□□□□ -0.92
LINC00339-203ENST00000420503 PKD1P98161 4303 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 IGHV4-4A0A075B6R2 117 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 TRAV14DV4A0A0A6YYC5 116 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 RTL8CO15255 209 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 IGKV1-39P01597 117 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 PMP2P02689 132 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 IGKV1D-39P04432 117 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 F2RP25116 425 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 HERV-K104P61576 105 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 TMEM69Q5SWH9 247 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 OR5AP2Q8NGF4 316 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 PINX1Q96BK5 328 aaKnown RBP9.32□□□□□ -0.92
LINC00339-203ENST00000420503 DGCR14Q96DF8 476 aaKnown RBP9.32□□□□□ -0.92
LINC00339-203ENST00000420503 AIFM2Q9BRQ8 373 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 ZNF2Q9BSG1 426 aaPredicted RBP9.32□□□□□ -0.92
LINC00339-203ENST00000420503 ZFAND3Q9H8U3 227 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 MRPL36Q9P0J6 103 aaKnown RBP9.32□□□□□ -0.92
LINC00339-203ENST00000420503 RSL24D1Q9UHA3 163 aaKnown RBP9.32□□□□□ -0.92
LINC00339-203ENST00000420503 X6R8D5 127 aa9.32□□□□□ -0.92
LINC00339-203ENST00000420503 A0A1B0GU03 582 aa9.31□□□□□ -0.92
LINC00339-203ENST00000420503 C15orf61A6NNL5 157 aa9.31□□□□□ -0.92
LINC00339-203ENST00000420503 M0R2N4 97 aa9.31□□□□□ -0.92
LINC00339-203ENST00000420503 CTDSP2O14595 271 aa9.31□□□□□ -0.92
LINC00339-203ENST00000420503 ST8SIA3O43173 380 aa9.31□□□□□ -0.92
LINC00339-203ENST00000420503 PHLDA2Q53GA4 152 aa9.31□□□□□ -0.92
LINC00339-203ENST00000420503 THOC7Q6I9Y2 204 aaKnown RBP9.31□□□□□ -0.92
LINC00339-203ENST00000420503 HSD17B13Q7Z5P4 300 aaPredicted RBP9.31□□□□□ -0.92
LINC00339-203ENST00000420503 OR1P1Q8NH06 330 aa9.31□□□□□ -0.92
LINC00339-203ENST00000420503 MOB3AQ96BX8 217 aa9.31□□□□□ -0.92
LINC00339-203ENST00000420503 VSIRQ9H7M9 311 aa9.31□□□□□ -0.92
LINC00339-203ENST00000420503 TMEM14BQ9NUH8 114 aa9.31□□□□□ -0.92
LINC00339-203ENST00000420503 ANAPC10Q9UM13 185 aa9.31□□□□□ -0.92
LINC00339-203ENST00000420503 SMIM31A0A1B0GVY4 71 aa9.3□□□□□ -0.92
LINC00339-203ENST00000420503 CCDC160A6NGH7 325 aa9.3□□□□□ -0.92
LINC00339-203ENST00000420503 CYB5BO43169 146 aa9.3□□□□□ -0.92
LINC00339-203ENST00000420503 FGF2P09038 288 aa9.3□□□□□ -0.92
LINC00339-203ENST00000420503 PPP5CP53041 499 aa9.3□□□□□ -0.92
LINC00339-203ENST00000420503 MFAP4P55083 255 aa9.3□□□□□ -0.92
LINC00339-203ENST00000420503 RELQ04864 619 aaPredicted RBP9.3□□□□□ -0.92
LINC00339-203ENST00000420503 TRPT1Q86TN4 253 aaKnown RBP9.3□□□□□ -0.92
LINC00339-203ENST00000420503 ATP6V0BQ99437 205 aa9.3□□□□□ -0.92
LINC00339-203ENST00000420503 RABAC1Q9UI14 185 aa9.3□□□□□ -0.92
LINC00339-203ENST00000420503 HSPG2P98160 4391 aa9.29□□□□□ -0.92
LINC00339-203ENST00000420503 SNAPC5O75971 98 aa9.29□□□□□ -0.92
LINC00339-203ENST00000420503 CBX5P45973 191 aa9.29□□□□□ -0.92
LINC00339-203ENST00000420503 RPL11P62913 178 aaKnown RBP9.29□□□□□ -0.92
LINC00339-203ENST00000420503 GPX8Q8TED1 209 aa9.29□□□□□ -0.92
LINC00339-203ENST00000420503 KRTAP3-3Q9BYR6 98 aa9.29□□□□□ -0.92
LINC00339-203ENST00000420503 KRTAP3-2Q9BYR7 98 aa9.29□□□□□ -0.92
LINC00339-203ENST00000420503 PRNDQ9UKY0 176 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms