RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 NAV2Q8IVL1 2488 aa16.7■□□□□ 0.26
GPC1-202ENST00000420138 LOC102723971A0A1B0GUV8 181 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 SMCO3A2RU48 225 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 B4DSR2 109 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 FNDC10F2Z333 226 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 ACTL6BO94805 426 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 GNB1P62873 340 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 MLANAQ16655 118 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 FAM120AOSQ5T036 256 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 RUSC1-AS1Q66K80 236 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 PVRIGQ6DKI7 326 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 PRSS57Q6UWY2 283 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 ZNF709Q8N972 641 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 RXFP4Q8TDU9 374 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 MGST2Q99735 147 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 NPVFQ9HCQ7 196 aa16.69■□□□□ 0.26
GPC1-202ENST00000420138 M0R036 132 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 REG1AP05451 166 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 AREGP15514 252 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 C5orf64Q2M2E5 130 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 AKIRIN2Q53H80 203 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 AWAT1Q58HT5 328 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 SSX7Q7RTT5 188 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 RPS10P5Q9NQ39 176 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 MAP1AP78559 2803 aaPredicted RBP16.68■□□□□ 0.26
GPC1-202ENST00000420138 IGHV1-69DA0A0B4J2H0 117 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 RNF223E7ERA6 249 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 C17orf112F2Z3M2 114 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 IGHV1-69P01742 117 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 PLGLAQ15195 96 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 RPP25LQ8N5L8 163 aaKnown RBP16.68■□□□□ 0.26
GPC1-202ENST00000420138 SRSF12Q8WXF0 261 aaKnown RBP16.68■□□□□ 0.26
GPC1-202ENST00000420138 SLC39A9Q9NUM3 307 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 GNG13Q9P2W3 67 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 CR1P17927 2039 aa16.68■□□□□ 0.26
GPC1-202ENST00000420138 IGHV3OR16-10A0A075B7F0 116 aa16.67■□□□□ 0.26
GPC1-202ENST00000420138 C7orf77A4D0Y5 90 aa16.67■□□□□ 0.26
GPC1-202ENST00000420138 MAP1LC3B2A6NCE7 125 aa16.67■□□□□ 0.26
GPC1-202ENST00000420138 MPDU1O75352 247 aa16.67■□□□□ 0.26
GPC1-202ENST00000420138 MFAP2P55001 183 aa16.67■□□□□ 0.26
GPC1-202ENST00000420138 CD69Q07108 199 aa16.67■□□□□ 0.26
GPC1-202ENST00000420138 ZNF114Q8NC26 417 aa16.67■□□□□ 0.26
GPC1-202ENST00000420138 Q96MF0 132 aa16.67■□□□□ 0.26
GPC1-202ENST00000420138 MAP1LC3BQ9GZQ8 125 aa16.67■□□□□ 0.26
GPC1-202ENST00000420138 HIF1ANQ9NWT6 349 aa16.67■□□□□ 0.26
GPC1-202ENST00000420138 TRAV40A0A0B4J280 105 aa16.66■□□□□ 0.26
GPC1-202ENST00000420138 FGF8P55075 233 aaPredicted RBP16.66■□□□□ 0.26
GPC1-202ENST00000420138 LOXL1Q08397 574 aaPredicted RBP16.66■□□□□ 0.26
GPC1-202ENST00000420138 RHEBQ15382 184 aa16.66■□□□□ 0.26
GPC1-202ENST00000420138 FFAR4Q5NUL3 377 aa16.66■□□□□ 0.26
GPC1-202ENST00000420138 C19orf35Q6ZS72 473 aa16.66■□□□□ 0.26
GPC1-202ENST00000420138 KRTAP1-3Q8IUG1 177 aa16.66■□□□□ 0.26
GPC1-202ENST00000420138 OR10G4Q8NGN3 311 aa16.66■□□□□ 0.26
GPC1-202ENST00000420138 GGTLC1Q9BX51 225 aa16.66■□□□□ 0.26
GPC1-202ENST00000420138 FNDC4Q9H6D8 234 aaPredicted RBP16.66■□□□□ 0.26
GPC1-202ENST00000420138 APELAP0DMC3 54 aa16.66■□□□□ 0.26
GPC1-202ENST00000420138 IGHV4-38-2P0DP08 117 aa16.66■□□□□ 0.26
GPC1-202ENST00000420138 BCL2P10415 239 aa16.66■□□□□ 0.26
GPC1-202ENST00000420138 PMS2P11Q13670 270 aa16.66■□□□□ 0.26
GPC1-202ENST00000420138 GAMTQ14353 236 aa16.66■□□□□ 0.26
GPC1-202ENST00000420138 RNASEH2CQ8TDP1 164 aaKnown RBP16.66■□□□□ 0.26
GPC1-202ENST00000420138 C7orf69Q9H7B7 122 aa16.66■□□□□ 0.26
GPC1-202ENST00000420138 IGKV1OR2-108A0A075B7D4 117 aa16.65■□□□□ 0.26
GPC1-202ENST00000420138 AVPP01185 164 aa16.65■□□□□ 0.26
GPC1-202ENST00000420138 TMEM11P17152 192 aa16.65■□□□□ 0.26
GPC1-202ENST00000420138 TEPPQ6URK8 271 aa16.65■□□□□ 0.26
GPC1-202ENST00000420138 BRD3OSQ6XYD6 125 aa16.65■□□□□ 0.26
GPC1-202ENST00000420138 MAPK1IP1LQ8NDC0 245 aa16.65■□□□□ 0.26
GPC1-202ENST00000420138 OR10G9Q8NGN4 311 aa16.65■□□□□ 0.26
GPC1-202ENST00000420138 OR10G7Q8NGN6 311 aa16.65■□□□□ 0.26
GPC1-202ENST00000420138 C20orf24Q9BUV8 137 aa16.65■□□□□ 0.26
GPC1-202ENST00000420138 PUS1Q9Y606 427 aaKnown RBP eCLIP16.65■□□□□ 0.26
GPC1-202ENST00000420138 PLXNB1O43157 2135 aa16.65■□□□□ 0.26
GPC1-202ENST00000420138 TRAV20A0A0B4J274 112 aa16.64■□□□□ 0.25
GPC1-202ENST00000420138 CTXND1A0A1B0GTU2 59 aa16.64■□□□□ 0.25
GPC1-202ENST00000420138 ZFP92A6NM28 416 aa16.64■□□□□ 0.25
GPC1-202ENST00000420138 SOX15O60248 233 aa16.64■□□□□ 0.25
GPC1-202ENST00000420138 IFNA1P01562 189 aa16.64■□□□□ 0.25
GPC1-202ENST00000420138 FAM106CPP0CH98 169 aa16.64■□□□□ 0.25
GPC1-202ENST00000420138 GPX4P36969 197 aaPredicted RBP16.64■□□□□ 0.25
GPC1-202ENST00000420138 OPRK1P41145 380 aa16.64■□□□□ 0.25
GPC1-202ENST00000420138 SUB1P53999 127 aaKnown RBP eCLIP16.64■□□□□ 0.25
GPC1-202ENST00000420138 TMEM144Q7Z5S9 345 aa16.64■□□□□ 0.25
GPC1-202ENST00000420138 CYB561D1Q8N8Q1 229 aa16.64■□□□□ 0.25
GPC1-202ENST00000420138 CACNG8Q8WXS5 425 aa16.64■□□□□ 0.25
GPC1-202ENST00000420138 ACTR3CQ9C0K3 210 aaPredicted RBP16.64■□□□□ 0.25
GPC1-202ENST00000420138 DMRT1Q9Y5R6 373 aa16.64■□□□□ 0.25
GPC1-202ENST00000420138 YIF1AO95070 293 aa16.63■□□□□ 0.25
GPC1-202ENST00000420138 FBP1P09467 338 aa16.63■□□□□ 0.25
GPC1-202ENST00000420138 BRS3P32247 399 aa16.63■□□□□ 0.25
GPC1-202ENST00000420138 AKR1C3P42330 323 aa16.63■□□□□ 0.25
GPC1-202ENST00000420138 KLF17Q5JT82 389 aaPredicted RBP16.63■□□□□ 0.25
GPC1-202ENST00000420138 LINC01356Q8N9X3 169 aa16.63■□□□□ 0.25
GPC1-202ENST00000420138 EIF3GO75821 320 aaKnown RBP eCLIP16.63■□□□□ 0.25
GPC1-202ENST00000420138 CEBPGP53567 150 aa16.63■□□□□ 0.25
GPC1-202ENST00000420138 ACOT6Q3I5F7 207 aaPredicted RBP16.63■□□□□ 0.25
GPC1-202ENST00000420138 GCSAMLQ5JQS6 135 aa16.63■□□□□ 0.25
GPC1-202ENST00000420138 MIC13Q5XKP0 118 aa16.63■□□□□ 0.25
GPC1-202ENST00000420138 SLC16A13Q7RTY0 426 aa16.63■□□□□ 0.25
GPC1-202ENST00000420138 MRPL41Q8IXM3 137 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms