RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 ERHP84090 104 aaKnown RBP12.75□□□□□ -0.37
PTCD1-202ENST00000419981 ZNF124Q15973 351 aa12.75□□□□□ -0.37
PTCD1-202ENST00000419981 IGHV3-48P01763 117 aa12.74□□□□□ -0.37
PTCD1-202ENST00000419981 HSPE1P61604 102 aaKnown RBP12.74□□□□□ -0.37
PTCD1-202ENST00000419981 GINS3Q9BRX5 216 aa12.74□□□□□ -0.37
PTCD1-202ENST00000419981 IGHV3OR16-13A0A075B7E8 117 aa12.73□□□□□ -0.37
PTCD1-202ENST00000419981 IGHV3-74A0A0B4J1X5 117 aa12.73□□□□□ -0.37
PTCD1-202ENST00000419981 MPTX1A8MV57 137 aa12.73□□□□□ -0.37
PTCD1-202ENST00000419981 TNFAIP8O95379 198 aa12.73□□□□□ -0.37
PTCD1-202ENST00000419981 PAFAH1B2P68402 229 aa12.73□□□□□ -0.37
PTCD1-202ENST00000419981 GATAD1Q8WUU5 269 aa12.73□□□□□ -0.37
PTCD1-202ENST00000419981 CSTL1Q9H114 145 aa12.73□□□□□ -0.37
PTCD1-202ENST00000419981 M0QYG6 137 aa12.72□□□□□ -0.37
PTCD1-202ENST00000419981 CD5P06127 495 aa12.72□□□□□ -0.37
PTCD1-202ENST00000419981 NCS1P62166 190 aa12.72□□□□□ -0.37
PTCD1-202ENST00000419981 SPINK9Q5DT21 86 aa12.72□□□□□ -0.37
PTCD1-202ENST00000419981 FAM90A2PQ658T7 463 aa12.72□□□□□ -0.37
PTCD1-202ENST00000419981 TCF24Q7RTU0 167 aa12.72□□□□□ -0.37
PTCD1-202ENST00000419981 GBGT1Q8N5D6 347 aa12.72□□□□□ -0.37
PTCD1-202ENST00000419981 DUSP18Q8NEJ0 188 aa12.72□□□□□ -0.37
PTCD1-202ENST00000419981 PHLDA1Q8WV24 401 aaPredicted RBP12.72□□□□□ -0.37
PTCD1-202ENST00000419981 HPGDSO60760 199 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 PGAM2P15259 253 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 ELK1P19419 428 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 SNCAP37840 140 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 NPBWR1P48145 328 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 AKR1C2P52895 323 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 RND3P61587 244 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 VBP1P61758 197 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 IZUMO4Q1ZYL8 232 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 TOMM20LQ6UXN7 152 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 SLC35G3Q8N808 338 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 ST8SIA2Q92186 375 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 ZNF486Q96H40 463 aaPredicted RBP12.71□□□□□ -0.37
PTCD1-202ENST00000419981 RARRES2Q99969 163 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 FUNDC2Q9BWH2 189 aa12.71□□□□□ -0.37
PTCD1-202ENST00000419981 ST8SIA3O43173 380 aa12.7□□□□□ -0.38
PTCD1-202ENST00000419981 RNASE12Q5GAN4 147 aaKnown RBP12.7□□□□□ -0.38
PTCD1-202ENST00000419981 ZNF600Q6ZNG1 722 aa12.7□□□□□ -0.38
PTCD1-202ENST00000419981 PDCD10Q9BUL8 212 aa12.7□□□□□ -0.38
PTCD1-202ENST00000419981 VSIRQ9H7M9 311 aa12.7□□□□□ -0.38
PTCD1-202ENST00000419981 ZFAND3Q9H8U3 227 aa12.7□□□□□ -0.38
PTCD1-202ENST00000419981 FAM25AB3EWG3 89 aa12.69□□□□□ -0.38
PTCD1-202ENST00000419981 FAM25CB3EWG5 89 aa12.69□□□□□ -0.38
PTCD1-202ENST00000419981 FAM25GB3EWG6 89 aa12.69□□□□□ -0.38
PTCD1-202ENST00000419981 DNASE2O00115 360 aaPredicted RBP12.69□□□□□ -0.38
PTCD1-202ENST00000419981 CORTO00230 105 aa12.69□□□□□ -0.38
PTCD1-202ENST00000419981 ATG12O94817 140 aa12.69□□□□□ -0.38
PTCD1-202ENST00000419981 IGKV1-5P01602 117 aa12.69□□□□□ -0.38
PTCD1-202ENST00000419981 PI3P19957 117 aa12.69□□□□□ -0.38
PTCD1-202ENST00000419981 PIGPP57054 158 aa12.69□□□□□ -0.38
PTCD1-202ENST00000419981 RNASE10Q5GAN6 216 aaKnown RBP12.69□□□□□ -0.38
PTCD1-202ENST00000419981 MZT2AQ6P582 158 aa12.69□□□□□ -0.38
PTCD1-202ENST00000419981 OR11H2Q8NH07 326 aa12.69□□□□□ -0.38
PTCD1-202ENST00000419981 TP53RKQ96S44 253 aa12.69□□□□□ -0.38
PTCD1-202ENST00000419981 PUS1Q9Y606 427 aaKnown RBP eCLIP12.69□□□□□ -0.38
PTCD1-202ENST00000419981 INS-IGF2F8WCM5 200 aa12.68□□□□□ -0.38
PTCD1-202ENST00000419981 CA1P00915 261 aaPredicted RBP12.68□□□□□ -0.38
PTCD1-202ENST00000419981 IFNA17P01571 189 aa12.68□□□□□ -0.38
PTCD1-202ENST00000419981 APOHP02749 345 aaPredicted RBP12.68□□□□□ -0.38
PTCD1-202ENST00000419981 P0C879 139 aa12.68□□□□□ -0.38
PTCD1-202ENST00000419981 RORCP51449 518 aa12.68□□□□□ -0.38
PTCD1-202ENST00000419981 SUB1P53999 127 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTCD1-202ENST00000419981 RPL11P62913 178 aaKnown RBP12.68□□□□□ -0.38
PTCD1-202ENST00000419981 LHFPL1Q86WI0 220 aa12.68□□□□□ -0.38
PTCD1-202ENST00000419981 ARRDC1Q8N5I2 433 aa12.68□□□□□ -0.38
PTCD1-202ENST00000419981 MFFQ9GZY8 342 aa12.68□□□□□ -0.38
PTCD1-202ENST00000419981 MS4A6AQ9H2W1 248 aa12.68□□□□□ -0.38
PTCD1-202ENST00000419981 C11orf68Q9H3H3 251 aaKnown RBP12.68□□□□□ -0.38
PTCD1-202ENST00000419981 TMEM231Q9H6L2 316 aa12.68□□□□□ -0.38
PTCD1-202ENST00000419981 KLK11Q9UBX7 282 aa12.68□□□□□ -0.38
PTCD1-202ENST00000419981 TRAV2A0A0B4J234 112 aa12.67□□□□□ -0.38
PTCD1-202ENST00000419981 A0A0B4J293 547 aa12.67□□□□□ -0.38
PTCD1-202ENST00000419981 IGHV3-66A0A0C4DH42 116 aa12.67□□□□□ -0.38
PTCD1-202ENST00000419981 DFFBO76075 338 aa12.67□□□□□ -0.38
PTCD1-202ENST00000419981 TMEM50AO95807 157 aa12.67□□□□□ -0.38
PTCD1-202ENST00000419981 HOXA1P49639 335 aaPredicted RBP12.67□□□□□ -0.38
PTCD1-202ENST00000419981 PPP5CP53041 499 aa12.67□□□□□ -0.38
PTCD1-202ENST00000419981 DEFB131AP59861 70 aa12.67□□□□□ -0.38
PTCD1-202ENST00000419981 LEMD1Q68G75 181 aa12.67□□□□□ -0.38
PTCD1-202ENST00000419981 LILRB2Q8N423 598 aa12.67□□□□□ -0.38
PTCD1-202ENST00000419981 C11orf45Q8TAV5 145 aa12.67□□□□□ -0.38
PTCD1-202ENST00000419981 C3orf85A0A1B0GTC6 90 aa12.66□□□□□ -0.38
PTCD1-202ENST00000419981 A0A1B0GU03 582 aa12.66□□□□□ -0.38
PTCD1-202ENST00000419981 CD3DP04234 171 aa12.66□□□□□ -0.38
PTCD1-202ENST00000419981 RNASE2P10153 161 aaKnown RBP12.66□□□□□ -0.38
PTCD1-202ENST00000419981 TBPP20226 339 aa12.66□□□□□ -0.38
PTCD1-202ENST00000419981 NANOS2P60321 138 aaKnown RBP12.66□□□□□ -0.38
PTCD1-202ENST00000419981 RBMS2Q15434 407 aaKnown RBP12.66□□□□□ -0.38
PTCD1-202ENST00000419981 TRIM16LQ309B1 348 aa12.66□□□□□ -0.38
PTCD1-202ENST00000419981 LGALS9CQ6DKI2 356 aa12.66□□□□□ -0.38
PTCD1-202ENST00000419981 PVRIGQ6DKI7 326 aa12.66□□□□□ -0.38
PTCD1-202ENST00000419981 RPP25LQ8N5L8 163 aaKnown RBP12.66□□□□□ -0.38
PTCD1-202ENST00000419981 CCDC71LQ8N9Z2 235 aa12.66□□□□□ -0.38
PTCD1-202ENST00000419981 AP3S1Q92572 193 aa12.66□□□□□ -0.38
PTCD1-202ENST00000419981 ENY2Q9NPA8 101 aa12.66□□□□□ -0.38
PTCD1-202ENST00000419981 COPZ2Q9P299 210 aa12.66□□□□□ -0.38
PTCD1-202ENST00000419981 FBXL17Q9UF56 701 aa12.66□□□□□ -0.38
PTCD1-202ENST00000419981 KMT2AQ03164 3969 aa12.65□□□□□ -0.38
PTCD1-202ENST00000419981 A0A1W2PS18 150 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms