RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 KLRD1Q13241 179 aa7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 CCDC144NLQ6NUI1 221 aa7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 CYP2G1PQ6ZSU1 146 aa7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 VMO1Q7Z5L0 202 aa7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 Q8N6K4 173 aa7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 OR1P1Q8NH06 330 aa7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 SSMEM1Q8WWF3 244 aa7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 YPEL4Q96NS1 127 aa7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 RNF2Q99496 336 aa7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 BPESC1Q9GZL8 116 aa7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 FNDC4Q9H6D8 234 aaPredicted RBP7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 SDF2L1Q9HCN8 221 aa7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 RPS10P5Q9NQ39 176 aa7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 METTL1Q9UBP6 276 aaKnown RBP7.24□□□□□ -1.25
LINCMD1-201ENST00000418518 ZFYVE26Q68DK2 2539 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 IGKV1D-37A0A075B6S9 117 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 VWC2LB2RUY7 222 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 NDUFS8O00217 210 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 CORTO00230 105 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 HMGB3O15347 200 aaKnown RBP7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 NBR2O15453 112 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 FOXH1O75593 365 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 EIF3GO75821 320 aaKnown RBP eCLIP7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 MOSP00540 346 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 SNRNP70P08621 437 aaKnown RBP7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 ARL14EPLP0DKL9 152 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 DEFA4P12838 97 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 OR10J1P30954 320 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 MFAP2P55001 183 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 SELENOTP62341 195 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 TNXAQ16473 311 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 ETFRF1Q6IPR1 90 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 SPNS3Q6ZMD2 512 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 NANPQ8TBE9 248 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 ABHD5Q8WTS1 349 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 C17orf50Q8WW18 174 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 TBX15Q96SF7 602 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 MRPL32Q9BYC8 188 aaKnown RBP7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 PUS1Q9Y606 427 aaKnown RBP eCLIP7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 F11RQ9Y624 299 aaKnown RBP7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 FLNCQ14315 2725 aa7.23□□□□□ -1.25
LINCMD1-201ENST00000418518 MYO18BQ8IUG5 2567 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 TCRBV4S1A1TA0A5B7 111 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 CXorf65A6NEN9 183 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 F6UZH7 168 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 PDE6DO43924 150 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 PAGE4O60829 102 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 ACTL6BO94805 426 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 MT-ND4LP03901 98 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 RNF224P0DH78 156 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 PAX1P15863 534 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 GCHFRP30047 84 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 UBE2E1P51965 193 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 RNF212Q495C1 297 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 SPATA31B1PQ5VZV4 182 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 LHFPL4Q7Z7J7 247 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 GATAD1Q8WUU5 269 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 SRSF12Q8WXF0 261 aaKnown RBP7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 HIST1H2BAQ96A08 127 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 MALSU1Q96EH3 234 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 AJUBAQ96IF1 538 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 EAF1Q96JC9 268 aaPredicted RBP7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 TRGV9Q99603 122 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 FBXL15Q9H469 300 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 TMEM242Q9NWH2 141 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 NAT8Q9UHE5 227 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 FUT9Q9Y231 359 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 ABCA1O95477 2261 aa7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.22□□□□□ -1.25
LINCMD1-201ENST00000418518 C11orf94C9JXX5 98 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 CLN5O75503 358 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 MT-CO2P00403 227 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 AREGP15514 252 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 ATF4P18848 351 aaPredicted RBP7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 RND2P52198 227 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 LCN2P80188 198 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 FLI1Q01543 452 aaPredicted RBP7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 MMDQ15546 238 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 SSX2Q16385 188 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 MLANAQ16655 118 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 C5orf64Q2M2E5 130 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 PQLC2Q6ZP29 291 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 DYNAPQ8N1N2 210 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 TMEM116Q8NCL8 245 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 OR1L6Q8NGR2 347 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 OR2T10Q8NGZ9 312 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 OR2T6Q8NHC8 308 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 C10orf105Q8TEF2 133 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 C11orf52Q96A22 123 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 BBC3Q96PG8 261 aaPredicted RBP7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 CCL19Q99731 98 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 SMIM7Q9BQ49 75 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 PIMREGQ9BSJ6 248 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 C20orf24Q9BUV8 137 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 PARLQ9H300 379 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 SEPSECSQ9HD40 501 aaKnown RBP7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 DOK5Q9P104 306 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 DMRT1Q9Y5R6 373 aa7.21□□□□□ -1.26
LINCMD1-201ENST00000418518 ZNF462Q96JM2 2506 aa7.2□□□□□ -1.26
LINCMD1-201ENST00000418518 ZNF727A8MUV8 499 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms