RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 SLC35B1P78383 322 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 NHLH2Q02577 135 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 ZNF266Q14584 549 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 MMDQ15546 238 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 PRSS8Q16651 343 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 FBLN7Q53RD9 439 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 TCTEX1D4Q5JR98 221 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 SPANXN5Q5MJ07 72 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 Q8N6K4 173 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 C5orf56Q8N8D9 126 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 ST8SIA2Q92186 375 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 CYTL1Q9NRR1 136 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 NDUFA4L2Q9NRX3 87 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 PRKDCP78527 4128 aaKnown RBP13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 H3BP45 60 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 DFFBO76075 338 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 ACTL6BO94805 426 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 HNF4GQ14541 408 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 COMMD1Q8N668 190 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 UBAC2Q8NBM4 344 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 ZNF680Q8NEM1 530 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 OR1S2Q8NGQ3 325 aa13.29□□□□□ -0.28
SCAMP4-204ENST00000414057 PLGLAQ15195 96 aa13.28□□□□□ -0.28
SCAMP4-204ENST00000414057 EIF5AL1Q6IS14 154 aaKnown RBP13.28□□□□□ -0.28
SCAMP4-204ENST00000414057 HSD17B13Q7Z5P4 300 aaPredicted RBP13.28□□□□□ -0.28
SCAMP4-204ENST00000414057 SLC35E3Q7Z769 313 aa13.28□□□□□ -0.28
SCAMP4-204ENST00000414057 BAP18Q8IXM2 172 aa13.28□□□□□ -0.28
SCAMP4-204ENST00000414057 OR5C1Q8NGR4 320 aa13.28□□□□□ -0.28
SCAMP4-204ENST00000414057 PINX1Q96BK5 328 aaKnown RBP13.28□□□□□ -0.28
SCAMP4-204ENST00000414057 RCC1LQ96I51 464 aaKnown RBP13.28□□□□□ -0.28
SCAMP4-204ENST00000414057 PLXNB1O43157 2135 aa13.27□□□□□ -0.28
SCAMP4-204ENST00000414057 CST7O76096 145 aa13.27□□□□□ -0.29
SCAMP4-204ENST00000414057 IFNA10P01566 189 aa13.27□□□□□ -0.29
SCAMP4-204ENST00000414057 IGHG2P01859 326 aa13.27□□□□□ -0.29
SCAMP4-204ENST00000414057 CNTFRP26992 372 aa13.27□□□□□ -0.29
SCAMP4-204ENST00000414057 HTR2BP41595 481 aa13.27□□□□□ -0.29
SCAMP4-204ENST00000414057 RAB11AP62491 216 aa13.27□□□□□ -0.29
SCAMP4-204ENST00000414057 ATP6V1FQ16864 119 aa13.27□□□□□ -0.29
SCAMP4-204ENST00000414057 MRGPRG-AS1Q2M3A8 158 aa13.27□□□□□ -0.29
SCAMP4-204ENST00000414057 MRAPQ8TCY5 172 aa13.27□□□□□ -0.29
SCAMP4-204ENST00000414057 OR4C12Q96R67 309 aa13.27□□□□□ -0.29
SCAMP4-204ENST00000414057 SRSF8Q9BRL6 282 aaKnown RBP13.27□□□□□ -0.29
SCAMP4-204ENST00000414057 UBQLN2Q9UHD9 624 aa13.27□□□□□ -0.29
SCAMP4-204ENST00000414057 NCBP2LA6PVI3 153 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 METTL15P1P0C7V9 234 aa13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 IGLL1P15814 213 aa13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 RPL27AP46776 148 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 ERHP84090 104 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 TMEM267Q0VDI3 215 aaPredicted RBP13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 EXOSC2Q13868 293 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 C5orf64Q2M2E5 130 aa13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 SPINK9Q5DT21 86 aa13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 SLC24A4Q8NFF2 622 aa13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 OR10P1Q8NGE3 313 aa13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 SCARB1Q8WTV0 552 aa13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 RBMXL1Q96E39 390 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 ATP5SQ99766 215 aa13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 HINT2Q9BX68 163 aa13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 GPR61Q9BZJ8 451 aa13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 SMIM3Q9BZL3 60 aa13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 FBXL15Q9H469 300 aa13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 TPSG1Q9NRR2 321 aa13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 PAIP2BQ9ULR5 123 aaKnown RBP13.26□□□□□ -0.29
SCAMP4-204ENST00000414057 C15orf62A8K5M9 175 aa13.25□□□□□ -0.29
SCAMP4-204ENST00000414057 PRB2P02812 416 aaPredicted RBP13.25□□□□□ -0.29
SCAMP4-204ENST00000414057 OR8U8P0C7N1 319 aa13.25□□□□□ -0.29
SCAMP4-204ENST00000414057 TNXAQ16473 311 aa13.25□□□□□ -0.29
SCAMP4-204ENST00000414057 RPL7L1Q6DKI1 246 aaKnown RBP13.25□□□□□ -0.29
SCAMP4-204ENST00000414057 C10orf99Q6UWK7 81 aa13.25□□□□□ -0.29
SCAMP4-204ENST00000414057 ZNF329Q86UD4 541 aa13.25□□□□□ -0.29
SCAMP4-204ENST00000414057 LILRB2Q8N423 598 aa13.25□□□□□ -0.29
SCAMP4-204ENST00000414057 TMEM217Q8N7C4 229 aa13.25□□□□□ -0.29
SCAMP4-204ENST00000414057 GGACTQ9BVM4 153 aa13.25□□□□□ -0.29
SCAMP4-204ENST00000414057 ARV1Q9H2C2 271 aa13.25□□□□□ -0.29
SCAMP4-204ENST00000414057 AP4M1O00189 453 aa13.24□□□□□ -0.29
SCAMP4-204ENST00000414057 NPY1RP25929 384 aa13.24□□□□□ -0.29
SCAMP4-204ENST00000414057 SNCAP37840 140 aa13.24□□□□□ -0.29
SCAMP4-204ENST00000414057 SLC38A11Q08AI6 406 aa13.24□□□□□ -0.29
SCAMP4-204ENST00000414057 BSXQ3C1V8 233 aa13.24□□□□□ -0.29
SCAMP4-204ENST00000414057 C2orf83Q53S99 150 aa13.24□□□□□ -0.29
SCAMP4-204ENST00000414057 BSCL2Q96G97 398 aaPredicted RBP13.24□□□□□ -0.29
SCAMP4-204ENST00000414057 RASL11BQ9BPW5 248 aa13.24□□□□□ -0.29
SCAMP4-204ENST00000414057 PARD6GQ9BYG4 376 aaPredicted RBP13.24□□□□□ -0.29
SCAMP4-204ENST00000414057 AURKAIP1Q9NWT8 199 aaPredicted RBP13.24□□□□□ -0.29
SCAMP4-204ENST00000414057 PMS2P5A8MQ11 134 aa13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 CFDP00746 253 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 IFNA5P01569 189 aa13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 MYOD1P15172 320 aa13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 SUB1P53999 127 aaKnown RBP eCLIP13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 PJVKQ0ZLH3 352 aa13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 CLINT1Q14677 625 aa13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 DPF1Q92782 380 aa13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 NOL4LQ96MY1 436 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 GINS3Q9BRX5 216 aa13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 MCRIP2Q9BUT9 160 aaKnown RBP13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 WFDC1Q9HC57 220 aa13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 NUDT19A8MXV4 375 aa13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 CA2P00918 260 aa13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 OR8G2PQ6IF36 304 aa13.23□□□□□ -0.29
SCAMP4-204ENST00000414057 TEX38Q6PEX7 206 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms