RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 TMEM238LA0A1B0GVL6 79 aa14.35□□□□□ -0.11
PHRF1-202ENST00000413872 A6NJY4 79 aa14.35□□□□□ -0.11
PHRF1-202ENST00000413872 TAS2R60P59551 318 aa14.35□□□□□ -0.11
PHRF1-202ENST00000413872 VN1R17PQ8TDU5 208 aa14.35□□□□□ -0.11
PHRF1-202ENST00000413872 AKAP6Q13023 2319 aa14.35□□□□□ -0.11
PHRF1-202ENST00000413872 CGAP01215 116 aa14.35□□□□□ -0.11
PHRF1-202ENST00000413872 NBL1P41271 181 aa14.35□□□□□ -0.11
PHRF1-202ENST00000413872 SOX21Q9Y651 276 aaPredicted RBP14.35□□□□□ -0.11
PHRF1-202ENST00000413872 DUSP14O95147 198 aaKnown RBP14.35□□□□□ -0.11
PHRF1-202ENST00000413872 STAG3L2P0CL84 134 aa14.35□□□□□ -0.11
PHRF1-202ENST00000413872 IGHV1-8P0DP01 117 aa14.35□□□□□ -0.11
PHRF1-202ENST00000413872 A0A1B0GW15 77 aa14.35□□□□□ -0.11
PHRF1-202ENST00000413872 NPFFO15130 113 aa14.35□□□□□ -0.11
PHRF1-202ENST00000413872 FHITP49789 147 aa14.35□□□□□ -0.11
PHRF1-202ENST00000413872 SGK494Q96LW2 274 aa14.35□□□□□ -0.11
PHRF1-202ENST00000413872 MDKP21741 143 aaPredicted RBP14.34□□□□□ -0.11
PHRF1-202ENST00000413872 TMEM42Q69YG0 159 aa14.34□□□□□ -0.11
PHRF1-202ENST00000413872 ZNF257Q9Y2Q1 563 aa14.34□□□□□ -0.11
PHRF1-202ENST00000413872 MDC1Q14676 2089 aaKnown RBP14.34□□□□□ -0.11
PHRF1-202ENST00000413872 TRGC2P03986 189 aa14.34□□□□□ -0.11
PHRF1-202ENST00000413872 RNF125Q96EQ8 232 aa14.34□□□□□ -0.11
PHRF1-202ENST00000413872 OTORQ9NRC9 128 aa14.34□□□□□ -0.11
PHRF1-202ENST00000413872 CACNA1DQ01668 2161 aa14.34□□□□□ -0.11
PHRF1-202ENST00000413872 SRSF6Q13247 344 aaKnown RBP14.34□□□□□ -0.11
PHRF1-202ENST00000413872 PNRC2Q9NPJ4 139 aaKnown RBP14.34□□□□□ -0.11
PHRF1-202ENST00000413872 CACNA1BQ00975 2339 aa14.33□□□□□ -0.11
PHRF1-202ENST00000413872 IGHV3-66A0A0C4DH42 116 aa14.33□□□□□ -0.11
PHRF1-202ENST00000413872 LRTM2Q8N967 370 aa14.33□□□□□ -0.11
PHRF1-202ENST00000413872 DUX3Q96PT4 197 aa14.33□□□□□ -0.11
PHRF1-202ENST00000413872 ERVH48-1M5A8F1 160 aa14.33□□□□□ -0.12
PHRF1-202ENST00000413872 HSPB9Q9BQS6 159 aa14.33□□□□□ -0.12
PHRF1-202ENST00000413872 TRBV20OR9-2A0A075B6H5 130 aa14.33□□□□□ -0.12
PHRF1-202ENST00000413872 CMC4P56277 68 aaPredicted RBP14.33□□□□□ -0.12
PHRF1-202ENST00000413872 SPTBN1Q01082 2364 aaKnown RBP14.33□□□□□ -0.12
PHRF1-202ENST00000413872 TCRBV4S1A1TA0A5B7 111 aa14.33□□□□□ -0.12
PHRF1-202ENST00000413872 ID3Q02535 119 aa14.33□□□□□ -0.12
PHRF1-202ENST00000413872 CYB5R2Q6BCY4 276 aa14.33□□□□□ -0.12
PHRF1-202ENST00000413872 SSC4DQ8WTU2 575 aa14.33□□□□□ -0.12
PHRF1-202ENST00000413872 NEU1Q99519 415 aa14.33□□□□□ -0.12
PHRF1-202ENST00000413872 TCF20Q9UGU0 1960 aaKnown RBP14.33□□□□□ -0.12
PHRF1-202ENST00000413872 NDUFS8O00217 210 aa14.32□□□□□ -0.12
PHRF1-202ENST00000413872 DMRTA2Q96SC8 542 aa14.32□□□□□ -0.12
PHRF1-202ENST00000413872 A0A0A6YYD4 124 aa14.32□□□□□ -0.12
PHRF1-202ENST00000413872 OR4C46A6NHA9 309 aa14.32□□□□□ -0.12
PHRF1-202ENST00000413872 OTX1P32242 354 aaPredicted RBP14.32□□□□□ -0.12
PHRF1-202ENST00000413872 NMUP48645 174 aa14.32□□□□□ -0.12
PHRF1-202ENST00000413872 TMEM200BQ69YZ2 307 aa14.32□□□□□ -0.12
PHRF1-202ENST00000413872 ZNF474Q6S9Z5 364 aaPredicted RBP14.32□□□□□ -0.12
PHRF1-202ENST00000413872 KCNS1Q96KK3 526 aa14.32□□□□□ -0.12
PHRF1-202ENST00000413872 TRAV14DV4A0A0A6YYC5 116 aa14.32□□□□□ -0.12
PHRF1-202ENST00000413872 EIF3GO75821 320 aaKnown RBP eCLIP14.32□□□□□ -0.12
PHRF1-202ENST00000413872 SRIP30626 198 aa14.32□□□□□ -0.12
PHRF1-202ENST00000413872 CIRBPQ14011 172 aaKnown RBP14.32□□□□□ -0.12
PHRF1-202ENST00000413872 TMEM155Q4W5P6 130 aa14.32□□□□□ -0.12
PHRF1-202ENST00000413872 OR1P1Q8NH06 330 aa14.32□□□□□ -0.12
PHRF1-202ENST00000413872 SDF2L1Q9HCN8 221 aa14.32□□□□□ -0.12
PHRF1-202ENST00000413872 TNFRSF18Q9Y5U5 241 aa14.32□□□□□ -0.12
PHRF1-202ENST00000413872 A0A087X0M5 115 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 TRAV41A0A0B4J266 112 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 LY6G6EA0A0G2JKS1 128 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 A0A1B0GX30 115 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 A0A1W2PRX2 142 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 C9JCJ5 164 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 TPTE2P1Q5T6R2 138 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 LEMD1Q68G75 181 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 VMO1Q7Z5L0 202 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 Q9H3A6 140 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 U3KQA8 63 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 TRBV6-6A0A0A6YYG2 114 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 C3orf36Q3SXR2 165 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 ASCL2Q99929 193 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 COL6A6A6NMZ7 2263 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 ETV2O00321 342 aaPredicted RBP14.31□□□□□ -0.12
PHRF1-202ENST00000413872 TMEM167AQ8TBQ9 72 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 GEMIN7Q9H840 131 aaKnown RBP14.31□□□□□ -0.12
PHRF1-202ENST00000413872 LEPP41159 167 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 LDLRAD2Q5SZI1 272 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 MIR17HGQ75NE6 70 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 ZMAT5Q9UDW3 170 aaKnown RBP14.31□□□□□ -0.12
PHRF1-202ENST00000413872 PAM16Q9Y3D7 125 aa14.31□□□□□ -0.12
PHRF1-202ENST00000413872 A0A087WV48 116 aa14.3□□□□□ -0.12
PHRF1-202ENST00000413872 RAMP3O60896 148 aa14.3□□□□□ -0.12
PHRF1-202ENST00000413872 TBL2Q9Y4P3 447 aaKnown RBP14.3□□□□□ -0.12
PHRF1-202ENST00000413872 CACNA1HO95180 2353 aa14.3□□□□□ -0.12
PHRF1-202ENST00000413872 TFF1P04155 84 aa14.3□□□□□ -0.12
PHRF1-202ENST00000413872 GFI1Q99684 422 aa14.3□□□□□ -0.12
PHRF1-202ENST00000413872 FREM3P0C091 2139 aa14.3□□□□□ -0.12
PHRF1-202ENST00000413872 A0A1B0GUT8 65 aa14.3□□□□□ -0.12
PHRF1-202ENST00000413872 CBY3A6NI87 242 aa14.3□□□□□ -0.12
PHRF1-202ENST00000413872 NAPSAO96009 420 aa14.3□□□□□ -0.12
PHRF1-202ENST00000413872 COX6CP09669 75 aa14.3□□□□□ -0.12
PHRF1-202ENST00000413872 FOLR2P14207 255 aa14.3□□□□□ -0.12
PHRF1-202ENST00000413872 PKIAP61925 76 aa14.3□□□□□ -0.12
PHRF1-202ENST00000413872 LINC01587Q99440 93 aa14.3□□□□□ -0.12
PHRF1-202ENST00000413872 TRAV9-1A0A075B6T8 112 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 RNF222A6NCQ9 220 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 CD5P06127 495 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 ERASQ7Z444 233 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 IGKV1-27A0A075B6S5 117 aa14.29□□□□□ -0.12
PHRF1-202ENST00000413872 DPRXA6NFQ7 191 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms