RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 APLNQ9ULZ1 77 aa12.2□□□□□ -0.46
MRPL55-220ENST00000411464 DBX1A6NMT0 343 aa12.19□□□□□ -0.46
MRPL55-220ENST00000411464 ST8SIA3O43173 380 aa12.19□□□□□ -0.46
MRPL55-220ENST00000411464 MT-CO2P00403 227 aa12.19□□□□□ -0.46
MRPL55-220ENST00000411464 PMP2P02689 132 aa12.19□□□□□ -0.46
MRPL55-220ENST00000411464 ALDH3B2P48448 385 aa12.19□□□□□ -0.46
MRPL55-220ENST00000411464 CENPSQ8N2Z9 138 aa12.19□□□□□ -0.46
MRPL55-220ENST00000411464 DUSP18Q8NEJ0 188 aa12.19□□□□□ -0.46
MRPL55-220ENST00000411464 OR4A16Q8NH70 328 aa12.19□□□□□ -0.46
MRPL55-220ENST00000411464 YIPF6Q96EC8 236 aa12.19□□□□□ -0.46
MRPL55-220ENST00000411464 MS4A6AQ9H2W1 248 aa12.19□□□□□ -0.46
MRPL55-220ENST00000411464 HRH4Q9H3N8 390 aa12.19□□□□□ -0.46
MRPL55-220ENST00000411464 RNF167Q9H6Y7 350 aa12.19□□□□□ -0.46
MRPL55-220ENST00000411464 LOC100506127A0A0U1RQW1 187 aa12.18□□□□□ -0.46
MRPL55-220ENST00000411464 GPR31O00270 319 aa12.18□□□□□ -0.46
MRPL55-220ENST00000411464 XRCC3O43542 346 aa12.18□□□□□ -0.46
MRPL55-220ENST00000411464 S100GP29377 79 aa12.18□□□□□ -0.46
MRPL55-220ENST00000411464 TAS2R46P59540 309 aa12.18□□□□□ -0.46
MRPL55-220ENST00000411464 TOMM20LQ6UXN7 152 aa12.18□□□□□ -0.46
MRPL55-220ENST00000411464 H2BFWTQ7Z2G1 175 aa12.18□□□□□ -0.46
MRPL55-220ENST00000411464 STHQ8IWL8 128 aa12.18□□□□□ -0.46
MRPL55-220ENST00000411464 OR5H2Q8NGV7 314 aa12.18□□□□□ -0.46
MRPL55-220ENST00000411464 OR6F1Q8NGZ6 308 aa12.18□□□□□ -0.46
MRPL55-220ENST00000411464 ST8SIA2Q92186 375 aa12.18□□□□□ -0.46
MRPL55-220ENST00000411464 S100A16Q96FQ6 103 aaKnown RBP12.18□□□□□ -0.46
MRPL55-220ENST00000411464 TRAV2A0A0B4J234 112 aa12.17□□□□□ -0.46
MRPL55-220ENST00000411464 IGHV3-66A0A0C4DH42 116 aa12.17□□□□□ -0.46
MRPL55-220ENST00000411464 NPBWR1P48145 328 aa12.17□□□□□ -0.46
MRPL55-220ENST00000411464 ERHP84090 104 aaKnown RBP12.17□□□□□ -0.46
MRPL55-220ENST00000411464 ZNF114Q8NC26 417 aa12.17□□□□□ -0.46
MRPL55-220ENST00000411464 VSIRQ9H7M9 311 aa12.17□□□□□ -0.46
MRPL55-220ENST00000411464 RABAC1Q9UI14 185 aa12.17□□□□□ -0.46
MRPL55-220ENST00000411464 DNAH10Q8IVF4 4471 aa12.17□□□□□ -0.46
MRPL55-220ENST00000411464 TMEM127O75204 238 aa12.16□□□□□ -0.46
MRPL55-220ENST00000411464 APOHP02749 345 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-220ENST00000411464 RPL5P46777 297 aaKnown RBP12.16□□□□□ -0.46
MRPL55-220ENST00000411464 PHLDA2Q53GA4 152 aa12.16□□□□□ -0.46
MRPL55-220ENST00000411464 TMEM41BQ5BJD5 291 aa12.16□□□□□ -0.46
MRPL55-220ENST00000411464 LPCAT3Q6P1A2 487 aa12.16□□□□□ -0.46
MRPL55-220ENST00000411464 LINC00336Q6ZUF6 198 aa12.16□□□□□ -0.46
MRPL55-220ENST00000411464 GPR141Q7Z602 305 aa12.16□□□□□ -0.46
MRPL55-220ENST00000411464 LILRB2Q8N423 598 aa12.16□□□□□ -0.46
MRPL55-220ENST00000411464 Q8NAQ8 132 aa12.16□□□□□ -0.46
MRPL55-220ENST00000411464 TMEM231Q9H6L2 316 aa12.16□□□□□ -0.46
MRPL55-220ENST00000411464 FAM212BQ9NTI7 297 aaPredicted RBP12.16□□□□□ -0.46
MRPL55-220ENST00000411464 IGHV4-28A0A0C4DH34 117 aa12.15□□□□□ -0.46
MRPL55-220ENST00000411464 MIFP14174 115 aa12.15□□□□□ -0.46
MRPL55-220ENST00000411464 HLA-DMBP28068 263 aa12.15□□□□□ -0.46
MRPL55-220ENST00000411464 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.46
MRPL55-220ENST00000411464 PRCDQ00LT1 54 aa12.15□□□□□ -0.46
MRPL55-220ENST00000411464 ZNF600Q6ZNG1 722 aa12.15□□□□□ -0.46
MRPL55-220ENST00000411464 FAM24BQ8N5W8 94 aa12.15□□□□□ -0.46
MRPL55-220ENST00000411464 SEC22AQ96IW7 307 aa12.15□□□□□ -0.46
MRPL55-220ENST00000411464 FUNDC2Q9BWH2 189 aa12.15□□□□□ -0.46
MRPL55-220ENST00000411464 FXYD6Q9H0Q3 95 aa12.15□□□□□ -0.46
MRPL55-220ENST00000411464 PUS1Q9Y606 427 aaKnown RBP eCLIP12.15□□□□□ -0.46
MRPL55-220ENST00000411464 KIAA1109Q2LD37 5005 aa12.14□□□□□ -0.47
MRPL55-220ENST00000411464 TRAV10A0A0B4J240 114 aa12.14□□□□□ -0.47
MRPL55-220ENST00000411464 A0A1W2PS18 150 aa12.14□□□□□ -0.47
MRPL55-220ENST00000411464 RBMY1A1P0DJD3 496 aaKnown RBP12.14□□□□□ -0.47
MRPL55-220ENST00000411464 RBMY1CP0DJD4 496 aa12.14□□□□□ -0.47
MRPL55-220ENST00000411464 NPPCP23582 126 aa12.14□□□□□ -0.47
MRPL55-220ENST00000411464 SNCAP37840 140 aa12.14□□□□□ -0.47
MRPL55-220ENST00000411464 TSPAN5P62079 268 aa12.14□□□□□ -0.47
MRPL55-220ENST00000411464 RBMY1FQ15415 496 aaKnown RBP12.14□□□□□ -0.47
MRPL55-220ENST00000411464 TMEM69Q5SWH9 247 aa12.14□□□□□ -0.47
MRPL55-220ENST00000411464 MORN3Q6PF18 240 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-220ENST00000411464 TBC1D26Q86UD7 250 aa12.14□□□□□ -0.47
MRPL55-220ENST00000411464 ANAPC10Q9UM13 185 aa12.14□□□□□ -0.47
MRPL55-220ENST00000411464 IGHV4-4A0A075B6R2 117 aa12.13□□□□□ -0.47
MRPL55-220ENST00000411464 SPP1P10451 314 aa12.13□□□□□ -0.47
MRPL55-220ENST00000411464 NAT1P18440 290 aa12.13□□□□□ -0.47
MRPL55-220ENST00000411464 HLA-DMAP28067 261 aa12.13□□□□□ -0.47
MRPL55-220ENST00000411464 PRSS3P35030 304 aa12.13□□□□□ -0.47
MRPL55-220ENST00000411464 HRH1P35367 487 aa12.13□□□□□ -0.47
MRPL55-220ENST00000411464 TAS2R20P59543 309 aa12.13□□□□□ -0.47
MRPL55-220ENST00000411464 GPR107Q5VW38 600 aa12.13□□□□□ -0.47
MRPL55-220ENST00000411464 Q6ZTC4 211 aa12.13□□□□□ -0.47
MRPL55-220ENST00000411464 CROCCP3Q8IVE0 287 aa12.13□□□□□ -0.47
MRPL55-220ENST00000411464 NAA50Q9GZZ1 169 aaKnown RBP12.13□□□□□ -0.47
MRPL55-220ENST00000411464 ZFAND3Q9H8U3 227 aa12.13□□□□□ -0.47
MRPL55-220ENST00000411464 HECTD4Q9Y4D8 3996 aa12.13□□□□□ -0.47
MRPL55-220ENST00000411464 TMEM50AO95807 157 aa12.12□□□□□ -0.47
MRPL55-220ENST00000411464 GIG44P09565 113 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-220ENST00000411464 LSM3P62310 102 aaKnown RBP12.12□□□□□ -0.47
MRPL55-220ENST00000411464 UBE2NLQ5JXB2 153 aa12.12□□□□□ -0.47
MRPL55-220ENST00000411464 TRPT1Q86TN4 253 aaKnown RBP12.12□□□□□ -0.47
MRPL55-220ENST00000411464 LYSMD2Q8IV50 215 aa12.12□□□□□ -0.47
MRPL55-220ENST00000411464 STXBP6Q8NFX7 210 aa12.12□□□□□ -0.47
MRPL55-220ENST00000411464 MRGPRFQ96AM1 343 aa12.12□□□□□ -0.47
MRPL55-220ENST00000411464 A0A1B0GU03 582 aa12.11□□□□□ -0.47
MRPL55-220ENST00000411464 IGKV1-39P01597 117 aa12.11□□□□□ -0.47
MRPL55-220ENST00000411464 IGKV1D-39P04432 117 aa12.11□□□□□ -0.47
MRPL55-220ENST00000411464 TGFBR1P36897 503 aa12.11□□□□□ -0.47
MRPL55-220ENST00000411464 SUB1P53999 127 aaKnown RBP eCLIP12.11□□□□□ -0.47
MRPL55-220ENST00000411464 SPINK9Q5DT21 86 aa12.11□□□□□ -0.47
MRPL55-220ENST00000411464 PVRIGQ6DKI7 326 aa12.11□□□□□ -0.47
MRPL55-220ENST00000411464 CLVS1Q8IUQ0 354 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-220ENST00000411464 SAMD12Q8N8I0 201 aa12.11□□□□□ -0.47
MRPL55-220ENST00000411464 GRAMD2BQ96HH9 432 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms