RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 HELTA6NFD8 242 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 MARCH11A6NNE9 402 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 H3BMM0 161 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 I3L2K1 104 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 MFNGO00587 321 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 EREGO14944 169 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 TNFSF12O43508 249 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 SCGB2A1O75556 95 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 CIB2O75838 187 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 ARL6IP5O75915 188 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 SNAPC5O75971 98 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 NUDT3O95989 172 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 MT-CO2P00403 227 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 IFNA5P01569 189 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 SMR3BP02814 79 aaPredicted RBP1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 UCHL1P09936 223 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGKV1-13P0DP09 117 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 HLA-DRB4P13762 266 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 HIST1H1DP16402 221 aaKnown RBP1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 DTYMKP23919 212 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 P2RY1P47900 373 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 ALDH3B2P48448 385 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 RASSF2P50749 326 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 CLDN12P56749 244 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 ARPC4P59998 168 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 DAD1P61803 113 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 SNRPD3P62318 126 aaKnown RBP1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 DLK1P80370 383 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 DHRS2Q13268 280 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 EIF4EBP1Q13541 118 aaPredicted RBP1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 CLINT1Q14677 625 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 ICAM4Q14773 271 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 MSMO1Q15800 293 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 USF2Q15853 346 aaPredicted RBP1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 RRN3P1Q2M238 152 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 OGFRL1Q5TC84 451 aaPredicted RBP1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 CDPF1Q6NVV7 123 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 CNIH2Q6PI25 160 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF600Q6ZNG1 722 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 Q6ZSN1 163 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 TPRA1Q86W33 373 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 CADM3Q8N126 398 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 NANOGP1Q8N7R0 232 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF555Q8NEP9 628 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR10R2Q8NGX6 335 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR51H1Q8NH63 302 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 DCANP1Q8TF63 244 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 PYDC1Q8WXC3 89 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 PINX1Q96BK5 328 aaKnown RBP1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 C17orf77Q96MU5 243 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 METTL26Q96S19 204 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 TSC22D3Q99576 134 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 C7orf50Q9BRJ6 194 aaKnown RBP1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 C9orf16Q9BUW7 83 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 CCDC90BQ9GZT6 254 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 Q9H3A6 140 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 SEPSECSQ9HD40 501 aaKnown RBP1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 CCL28Q9NRJ3 127 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 NDUFA4L2Q9NRX3 87 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 PRNDQ9UKY0 176 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 AK6Q9Y3D8 172 aaKnown RBP1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 GOLT1BQ9Y3E0 138 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 LINC00588Q9Y4M8 146 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 YTHDF2Q9Y5A9 579 aaKnown RBP1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR51B2Q9Y5P1 312 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 V9GY05 133 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 HLA-DRB4X5D2U9 266 aa1.66□□□□□ -2.14
RNU4-53P-201ENST00000410828 NACAE9PAV3 2078 aa1.65□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMEM272A0A1B0GTI8 110 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 A0A1B0GU03 582 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 LYRM9A8MSI8 78 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 KRTAP29-1A8MX34 341 aaPredicted RBP1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 F5H768 121 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 M0QYG6 137 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 CORTO00230 105 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 SULT1C2O00338 296 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 ATP8B1O43520 1251 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 CLN5O75503 358 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 TMEM50AO95807 157 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 KRASP01116 189 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 PPYP01298 95 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 IGKV3-20P01619 116 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 IGHV3-48P01763 117 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 ATP5G1P05496 136 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 DEFB130BP0DP73 79 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 DEFB130AP0DP74 79 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 RAB6AP20340 208 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 F2RP25116 425 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 PSMA1P25786 263 aaKnown RBP1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 CRYBB3P26998 211 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 FCGR2CP31995 323 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 SNCAP37840 140 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 NKX2-1P43699 371 aaPredicted RBP1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 ATP5G3P48201 142 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 FXYD7P58549 80 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 ERVFC1-1P60608 527 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 ERHP84090 104 aaKnown RBP1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 SPHARQ15513 63 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 CDNFQ49AH0 187 aa1.65□□□□□ -2.15
RNU4-53P-201ENST00000410828 RNASE12Q5GAN4 147 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 723.4 ms