RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 ROBO3Q96MS0 1386 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 RGPD2P0DJD1 1756 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 A0A0A6YYD5 115 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 FAM90A8PA6NJQ4 464 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 FAM90A13PP0C7W8 464 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 FAM90A24PP0C7X0 464 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 SNRPGP62308 76 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 C1orf140Q5VVS0 124 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 NPWQ8N729 165 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 STPG3Q8N7X2 389 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 FDCSPQ8NFU4 85 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 SDF2L1Q9HCN8 221 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 MRPS18AQ9NVS2 196 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 HS3ST3B1Q9Y662 390 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 J3QQQ9 107 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 SLC25A20O43772 301 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 CCL8P80075 99 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 ZNF146Q15072 292 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 Q6AWC8 147 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 LCNL1Q6ZST4 164 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 DTX1Q86Y01 620 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 MRPL32Q9BYC8 188 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 RNF114Q9Y508 228 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 WDR81Q562E7 1941 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 ARID1AO14497 2285 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 MST1RQ04912 1400 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 H3BT86 120 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 SRSF10O75494 262 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 TIAF1O95411 115 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 IGHMP01871 453 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 GCHFRP30047 84 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 SRSF3P84103 164 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 TNFAIP6P98066 277 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 TMEM179BQ7Z7N9 219 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 TMEM99Q8N816 258 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 NKAPP1Q8N9T2 125 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 NUP35Q8NFH5 326 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 SHISA4Q96DD7 197 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 VWCEQ96DN2 955 aa4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 SPTBN5Q9NRC6 3674 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-204ENST00000410054 IGHV4-34P06331 123 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 COX7CP15954 63 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 EDDM3BP56851 147 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 EFEMP1Q12805 493 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 FOXE3Q13461 319 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 LAGE3Q14657 143 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 TDRG1Q3Y452 100 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 OR10AC1Q8NH08 325 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 NTN5Q8WTR8 489 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 ZC2HC1AQ96GY0 325 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 ZNF355PQ9NSJ1 428 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 FER1L4A9Z1Z3 1794 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 A0A0U1RQF3 1178 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 OOSP1A8MZH6 123 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 C12orf77C9JDV5 145 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 GASTP01350 101 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 HOXB7P09629 217 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 FAM90A1Q86YD7 464 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 SLC25A28Q96A46 364 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 LYZL4Q96KX0 146 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 C9orf85Q96MD7 179 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 PYGO2Q9BRQ0 406 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 STRCQ7RTU9 1775 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 DKK1O94907 266 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 GRNP28799 593 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 PPICP45877 212 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 CST6Q15828 149 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 ZNF718Q3SXZ3 478 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 C10orf128Q5T292 105 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 AMTNQ6UX39 209 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 FOXI2Q6ZQN5 318 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 PLXDC1Q8IUK5 500 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 GDF15Q99988 308 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 CYTL1Q9NRR1 136 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 SNED1Q8TER0 1413 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 STRCP1A6NGW2 1772 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 TMEM272A0A1B0GTI8 110 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 TMEM30CPA0ZSE6 113 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 FAM90A10PA6NDY2 464 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 K7ERS5 55 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 BEAN1Q3B7T3 259 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 SPANXN5Q5MJ07 72 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 C18orf32Q8TCD1 76 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 AGMATQ9BSE5 352 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 IL17CQ9P0M4 197 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 ZNF706Q9Y5V0 76 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 RFNGQ9Y644 331 aa4.35□□□□□ -1.71
R3HDM1-204ENST00000410054 EVPLQ92817 2033 aa4.34□□□□□ -1.71
R3HDM1-204ENST00000410054 TRAV12-3A0A0B4J271 114 aa4.34□□□□□ -1.71
R3HDM1-204ENST00000410054 CTXND1A0A1B0GTU2 59 aa4.34□□□□□ -1.71
R3HDM1-204ENST00000410054 LOC389332A0A1B0GUA5 103 aa4.34□□□□□ -1.71
R3HDM1-204ENST00000410054 D6R8Y8 96 aa4.34□□□□□ -1.71
R3HDM1-204ENST00000410054 SERF2P84101 59 aa4.34□□□□□ -1.71
R3HDM1-204ENST00000410054 KLF9Q13886 244 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-204ENST00000410054 NMSQ5H8A3 153 aa4.34□□□□□ -1.71
R3HDM1-204ENST00000410054 FAM53AQ6NSI3 398 aaPredicted RBP4.34□□□□□ -1.71
R3HDM1-204ENST00000410054 HOGA1Q86XE5 327 aa4.34□□□□□ -1.71
R3HDM1-204ENST00000410054 MUSTN1Q8IVN3 82 aa4.34□□□□□ -1.71
R3HDM1-204ENST00000410054 SFTPA2Q8IWL1 248 aa4.34□□□□□ -1.71
R3HDM1-204ENST00000410054 SLC25A29Q8N8R3 303 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms