RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 KIR2DL2P43627 348 aaPredicted RBP2.55□□□□□ -2
CUL3-204ENST00000409777 GABRA2P47869 451 aa2.55□□□□□ -2
CUL3-204ENST00000409777 TFPI2P48307 235 aa2.55□□□□□ -2
CUL3-204ENST00000409777 CYB561P49447 251 aa2.55□□□□□ -2
CUL3-204ENST00000409777 GNG4P50150 75 aa2.55□□□□□ -2
CUL3-204ENST00000409777 HSPE1P61604 102 aaKnown RBP2.55□□□□□ -2
CUL3-204ENST00000409777 PLP2Q04941 152 aa2.55□□□□□ -2
CUL3-204ENST00000409777 SLAQ13239 276 aa2.55□□□□□ -2
CUL3-204ENST00000409777 TBC1D28Q2M2D7 210 aa2.55□□□□□ -2
CUL3-204ENST00000409777 ALKBH6Q3KRA9 238 aa2.55□□□□□ -2
CUL3-204ENST00000409777 PMS2CLQ68D20 193 aa2.55□□□□□ -2
CUL3-204ENST00000409777 PQLC2Q6ZP29 291 aa2.55□□□□□ -2
CUL3-204ENST00000409777 BAGE3Q86Y29 109 aa2.55□□□□□ -2
CUL3-204ENST00000409777 BAGE2Q86Y30 109 aa2.55□□□□□ -2
CUL3-204ENST00000409777 THAP8Q8NA92 274 aa2.55□□□□□ -2
CUL3-204ENST00000409777 OR1L8Q8NGR8 309 aa2.55□□□□□ -2
CUL3-204ENST00000409777 STARD4Q96DR4 205 aa2.55□□□□□ -2
CUL3-204ENST00000409777 GRAMD2BQ96HH9 432 aa2.55□□□□□ -2
CUL3-204ENST00000409777 CITED2Q99967 270 aaPredicted RBP2.55□□□□□ -2
CUL3-204ENST00000409777 VKORC1Q9BQB6 163 aa2.55□□□□□ -2
CUL3-204ENST00000409777 SLC25A2Q9BXI2 301 aa2.55□□□□□ -2
CUL3-204ENST00000409777 TTTY12Q9BZ98 90 aa2.55□□□□□ -2
CUL3-204ENST00000409777 NPFFR1Q9GZQ6 430 aa2.55□□□□□ -2
CUL3-204ENST00000409777 TNFRSF19Q9NS68 423 aa2.55□□□□□ -2
CUL3-204ENST00000409777 TMEM140Q9NV12 185 aa2.55□□□□□ -2
CUL3-204ENST00000409777 ZNF492Q9P255 531 aa2.55□□□□□ -2
CUL3-204ENST00000409777 LOXL2Q9Y4K0 774 aa2.55□□□□□ -2
CUL3-204ENST00000409777 SPTBN5Q9NRC6 3674 aaKnown RBP2.55□□□□□ -2
CUL3-204ENST00000409777 XIRP2A4UGR9 3374 aa2.55□□□□□ -2
CUL3-204ENST00000409777 TRAV3A0A0B4J244 114 aa2.55□□□□□ -2
CUL3-204ENST00000409777 C19orf71A6NCJ1 209 aa2.55□□□□□ -2
CUL3-204ENST00000409777 FAM231BA6NCW3 169 aa2.55□□□□□ -2
CUL3-204ENST00000409777 HELTA6NFD8 242 aa2.55□□□□□ -2
CUL3-204ENST00000409777 VWC2LB2RUY7 222 aa2.55□□□□□ -2
CUL3-204ENST00000409777 APCSP02743 223 aa2.55□□□□□ -2
CUL3-204ENST00000409777 CCL4P13236 92 aa2.55□□□□□ -2
CUL3-204ENST00000409777 IGLL1P15814 213 aa2.55□□□□□ -2
CUL3-204ENST00000409777 ZNF134P52741 427 aa2.55□□□□□ -2
CUL3-204ENST00000409777 RPL19P84098 196 aaKnown RBP2.55□□□□□ -2
CUL3-204ENST00000409777 PRCDQ00LT1 54 aa2.55□□□□□ -2
CUL3-204ENST00000409777 MIR17HGQ75NE6 70 aa2.55□□□□□ -2
CUL3-204ENST00000409777 DEFB125Q8N687 156 aa2.55□□□□□ -2
CUL3-204ENST00000409777 TMEM116Q8NCL8 245 aa2.55□□□□□ -2
CUL3-204ENST00000409777 ZNF738Q8NE65 137 aa2.55□□□□□ -2
CUL3-204ENST00000409777 SLC24A4Q8NFF2 622 aa2.55□□□□□ -2
CUL3-204ENST00000409777 ZNF596Q8TC21 504 aa2.55□□□□□ -2
CUL3-204ENST00000409777 CT55Q8WUE5 264 aa2.55□□□□□ -2
CUL3-204ENST00000409777 CHCHD1Q96BP2 118 aaKnown RBP2.55□□□□□ -2
CUL3-204ENST00000409777 ZPBPQ9BS86 351 aa2.55□□□□□ -2
CUL3-204ENST00000409777 SLC25A33Q9BSK2 321 aa2.55□□□□□ -2
CUL3-204ENST00000409777 GFRA4Q9GZZ7 299 aa2.55□□□□□ -2
CUL3-204ENST00000409777 CLCF1Q9UBD9 225 aa2.55□□□□□ -2
CUL3-204ENST00000409777 SPAG17Q6Q759 2223 aa2.55□□□□□ -2
CUL3-204ENST00000409777 UNC13CQ8NB66 2214 aa2.55□□□□□ -2
CUL3-204ENST00000409777 RAI1Q7Z5J4 1906 aaPredicted RBP2.55□□□□□ -2
CUL3-204ENST00000409777 IGKV1D-17A0A075B6S4 117 aa2.55□□□□□ -2
CUL3-204ENST00000409777 SRRM5B3KS81 715 aa2.55□□□□□ -2
CUL3-204ENST00000409777 TCF21O43680 179 aa2.55□□□□□ -2
CUL3-204ENST00000409777 OR7C2O60412 319 aa2.55□□□□□ -2
CUL3-204ENST00000409777 IGHV3-9P01782 118 aa2.55□□□□□ -2
CUL3-204ENST00000409777 EDN2P20800 178 aa2.55□□□□□ -2
CUL3-204ENST00000409777 ACP1P24666 158 aa2.55□□□□□ -2
CUL3-204ENST00000409777 SRIP30626 198 aa2.55□□□□□ -2
CUL3-204ENST00000409777 MC5RP33032 325 aa2.55□□□□□ -2
CUL3-204ENST00000409777 SSTR5P35346 364 aa2.55□□□□□ -2
CUL3-204ENST00000409777 MPV17P39210 176 aa2.55□□□□□ -2
CUL3-204ENST00000409777 AMTP48728 403 aa2.55□□□□□ -2
CUL3-204ENST00000409777 CEBPDP49716 269 aaPredicted RBP2.55□□□□□ -2
CUL3-204ENST00000409777 HNRNPA3P51991 378 aaKnown RBP2.55□□□□□ -2
CUL3-204ENST00000409777 FOXA3P55318 350 aaPredicted RBP2.55□□□□□ -2
CUL3-204ENST00000409777 LINC00205P59089 165 aa2.55□□□□□ -2
CUL3-204ENST00000409777 AESQ08117 197 aa2.55□□□□□ -2
CUL3-204ENST00000409777 C17orf58Q2M2W7 97 aa2.55□□□□□ -2
CUL3-204ENST00000409777 FBLN7Q53RD9 439 aa2.55□□□□□ -2
CUL3-204ENST00000409777 FAM162BQ5T6X4 162 aa2.55□□□□□ -2
CUL3-204ENST00000409777 STUMQ69YW2 141 aa2.55□□□□□ -2
CUL3-204ENST00000409777 UFSP1Q6NVU6 142 aa2.55□□□□□ -2
CUL3-204ENST00000409777 ZNF841Q6ZN19 808 aa2.55□□□□□ -2
CUL3-204ENST00000409777 ZNF329Q86UD4 541 aa2.55□□□□□ -2
CUL3-204ENST00000409777 GCNT2Q8N0V5 402 aa2.55□□□□□ -2
CUL3-204ENST00000409777 GCSAMQ8N6F7 178 aa2.55□□□□□ -2
CUL3-204ENST00000409777 TMEM251Q8N6I4 163 aa2.55□□□□□ -2
CUL3-204ENST00000409777 SLC25A40Q8TBP6 338 aa2.55□□□□□ -2
CUL3-204ENST00000409777 CACNG8Q8WXS5 425 aa2.55□□□□□ -2
CUL3-204ENST00000409777 ADTRPQ96IZ2 230 aa2.55□□□□□ -2
CUL3-204ENST00000409777 NABP2Q9BQ15 211 aa2.55□□□□□ -2
CUL3-204ENST00000409777 SCRT2Q9NQ03 307 aa2.55□□□□□ -2
CUL3-204ENST00000409777 B4GALT7Q9UBV7 327 aa2.55□□□□□ -2
CUL3-204ENST00000409777 NAT8BQ9UHF3 227 aa2.55□□□□□ -2
CUL3-204ENST00000409777 DOCK10Q96BY6 2186 aa2.54□□□□□ -2
CUL3-204ENST00000409777 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.54□□□□□ -2
CUL3-204ENST00000409777 UPK2O00526 184 aa2.54□□□□□ -2
CUL3-204ENST00000409777 WNT9BO14905 357 aa2.54□□□□□ -2
CUL3-204ENST00000409777 CRYGCP07315 174 aa2.54□□□□□ -2
CUL3-204ENST00000409777 SP9P0CG40 484 aa2.54□□□□□ -2
CUL3-204ENST00000409777 RNASE2P10153 161 aaKnown RBP2.54□□□□□ -2
CUL3-204ENST00000409777 IGFBP2P18065 325 aa2.54□□□□□ -2
CUL3-204ENST00000409777 IGHV1-2P23083 117 aa2.54□□□□□ -2
CUL3-204ENST00000409777 COL8A2P25067 703 aa2.54□□□□□ -2
CUL3-204ENST00000409777 CRYBB3P26998 211 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms