RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SOHLH1Q5JUK2 328 aa10.02□□□□□ -0.81
CHRNA1-205ENST00000409542 SPANXN5Q5MJ07 72 aa10.02□□□□□ -0.81
CHRNA1-205ENST00000409542 FAM53AQ6NSI3 398 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-205ENST00000409542 LILRB2Q8N423 598 aa10.02□□□□□ -0.81
CHRNA1-205ENST00000409542 RXFP4Q8TDU9 374 aa10.02□□□□□ -0.81
CHRNA1-205ENST00000409542 PINX1Q96BK5 328 aaKnown RBP10.02□□□□□ -0.81
CHRNA1-205ENST00000409542 YPEL2Q96QA6 119 aa10.02□□□□□ -0.81
CHRNA1-205ENST00000409542 AGMATQ9BSE5 352 aa10.02□□□□□ -0.81
CHRNA1-205ENST00000409542 WDR61Q9GZS3 305 aaKnown RBP10.02□□□□□ -0.81
CHRNA1-205ENST00000409542 RAB9BQ9NP90 201 aa10.02□□□□□ -0.81
CHRNA1-205ENST00000409542 RPS10P5Q9NQ39 176 aa10.02□□□□□ -0.81
CHRNA1-205ENST00000409542 PSG11Q9UQ72 335 aa10.02□□□□□ -0.81
CHRNA1-205ENST00000409542 IGHV2-26A0A0B4J1V2 119 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 A0A1B0GV50 99 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 M0R036 132 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 ST8SIA5O15466 376 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 KRASP01116 189 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 OR13C7P0DN81 318 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 EDDM3BP56851 147 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 EDDM3AQ14507 147 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 Q3ZCU0 254 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 RNF212Q495C1 297 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 AARDQ4LEZ3 155 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 KHDC3LQ587J8 217 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 H2BFWTQ7Z2G1 175 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 TPRX1Q8N7U7 411 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 SFT2D1Q8WV19 159 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 OR4C12Q96R67 309 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 RARRES2Q99969 163 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 OR6C3Q9NZP0 311 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 GAB2Q9UQC2 676 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 U3KQK5 164 aa10.01□□□□□ -0.81
CHRNA1-205ENST00000409542 IGHV3-43A0A0B4J1X8 118 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 LOC102723971A0A1B0GUV8 181 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 RBFOX2O43251 390 aaKnown RBP eCLIP10□□□□□ -0.81
CHRNA1-205ENST00000409542 RBP4P02753 201 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 SNRNP70P08621 437 aaKnown RBP10□□□□□ -0.81
CHRNA1-205ENST00000409542 IGHV3-43DP0DP04 118 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 DUTP33316 252 aaKnown RBP10□□□□□ -0.81
CHRNA1-205ENST00000409542 KIR2DS2P43631 304 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 GPR12P47775 334 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 PMS2P11Q13670 270 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 MORN2Q502X0 79 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 TMEM41BQ5BJD5 291 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 OR2B11Q5JQS5 317 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 MINOS1Q5TGZ0 78 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 OR4P4Q8NGL7 312 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 RFESDQ8TAC1 157 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 CLCC1Q96S66 551 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 RSG1Q9BU20 258 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 TMEM147Q9BVK8 224 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 RPRMQ9NS64 109 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 MINOS1-NBL1R4GNA1 71 aa10□□□□□ -0.81
CHRNA1-205ENST00000409542 LINC00473A8K010 186 aa9.99□□□□□ -0.81
CHRNA1-205ENST00000409542 MT-ND4LP03901 98 aa9.99□□□□□ -0.81
CHRNA1-205ENST00000409542 CGB3P0DN86 165 aa9.99□□□□□ -0.81
CHRNA1-205ENST00000409542 CGB7P0DN87 165 aa9.99□□□□□ -0.81
CHRNA1-205ENST00000409542 THBS3P49746 956 aa9.99□□□□□ -0.81
CHRNA1-205ENST00000409542 TMEM30BQ3MIR4 351 aa9.99□□□□□ -0.81
CHRNA1-205ENST00000409542 OR4X2Q8NGF9 303 aa9.99□□□□□ -0.81
CHRNA1-205ENST00000409542 DTD1Q8TEA8 209 aa9.99□□□□□ -0.81
CHRNA1-205ENST00000409542 HIST1H2BAQ96A08 127 aa9.99□□□□□ -0.81
CHRNA1-205ENST00000409542 ZNF714Q96N38 554 aa9.99□□□□□ -0.81
CHRNA1-205ENST00000409542 SLC25A33Q9BSK2 321 aa9.99□□□□□ -0.81
CHRNA1-205ENST00000409542 GAR1Q9NY12 217 aaKnown RBP9.99□□□□□ -0.81
CHRNA1-205ENST00000409542 GNG12Q9UBI6 72 aa9.99□□□□□ -0.81
CHRNA1-205ENST00000409542 PMS2P5A8MQ11 134 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 HPRT1P00492 218 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 MAS1LP35410 378 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 RAB7AP51149 207 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 HAGHQ16775 308 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 VWC2Q2TAL6 325 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 AKIRIN2Q53H80 203 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 ZNF329Q86UD4 541 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 BIN3Q9NQY0 253 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 CALYQ9NYX4 217 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 A0A087WWC5 75 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 UBE2L5PA0A1B0GUS4 154 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 MARCH11A6NNE9 402 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 BCL2P10415 239 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 ZNF726P1Q15940 193 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 C9orf152Q5JTZ5 239 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 C8orf86Q6ZUL3 223 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 C16orf82Q7Z2V1 217 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 DPF1Q92782 380 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 RBM14Q96PK6 669 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 DUX3Q96PT4 197 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 ASCL2Q99929 193 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 CLEC7AQ9BXN2 247 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 TMEM133Q9H2Q1 129 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 IFI27L2Q9H2X8 130 aa9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 LSM4Q9Y4Z0 139 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-205ENST00000409542 STAB2Q8WWQ8 2551 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 H3BQ15 152 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 M0R1X1 148 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 PROP1O75360 226 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 NDUFS6O75380 124 aaKnown RBP9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 IFNA1P01562 189 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 MBP02144 154 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms